RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 ZNF22P17026 224 aaPredicted RBP6.61□□□□□ -1.35
CLRN1-201ENST00000295911 SRSF9Q13242 221 aaKnown RBP eCLIP6.61□□□□□ -1.35
CLRN1-201ENST00000295911 DGAT2L7PQ6IED9 249 aa6.61□□□□□ -1.35
CLRN1-201ENST00000295911 PHLDA1Q8WV24 401 aaPredicted RBP6.61□□□□□ -1.35
CLRN1-201ENST00000295911 RAB37Q96AX2 223 aa6.61□□□□□ -1.35
CLRN1-201ENST00000295911 GTSF1LQ9H1H1 148 aa6.61□□□□□ -1.35
CLRN1-201ENST00000295911 SPANXB1Q9NS25 103 aaPredicted RBP6.61□□□□□ -1.35
CLRN1-201ENST00000295911 Q9UF83 564 aa6.61□□□□□ -1.35
CLRN1-201ENST00000295911 CSDC2Q9Y534 153 aaKnown RBP6.61□□□□□ -1.35
CLRN1-201ENST00000295911 MTORP42345 2549 aa6.61□□□□□ -1.35
CLRN1-201ENST00000295911 IGHV3-38A0A0C4DH36 116 aa6.6□□□□□ -1.35
CLRN1-201ENST00000295911 GAGE12BA1L429 117 aa6.6□□□□□ -1.35
CLRN1-201ENST00000295911 GAGE7O76087 117 aa6.6□□□□□ -1.35
CLRN1-201ENST00000295911 GAGE12FP0CL80 117 aa6.6□□□□□ -1.35
CLRN1-201ENST00000295911 GAGE12GP0CL81 117 aa6.6□□□□□ -1.35
CLRN1-201ENST00000295911 GAGE12IP0CL82 117 aa6.6□□□□□ -1.35
CLRN1-201ENST00000295911 UBE2D3P61077 147 aa6.6□□□□□ -1.35
CLRN1-201ENST00000295911 UBE2D2P62837 147 aa6.6□□□□□ -1.35
CLRN1-201ENST00000295911 SLC25A29Q8N8R3 303 aa6.6□□□□□ -1.35
CLRN1-201ENST00000295911 FAM104AQ969W3 186 aa6.6□□□□□ -1.35
CLRN1-201ENST00000295911 NHP2Q9NX24 153 aaKnown RBP6.6□□□□□ -1.35
CLRN1-201ENST00000295911 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.59□□□□□ -1.35
CLRN1-201ENST00000295911 TRGV4A0A0C4DH28 118 aa6.59□□□□□ -1.35
CLRN1-201ENST00000295911 A0A0J9YY99 117 aa6.59□□□□□ -1.35
CLRN1-201ENST00000295911 A0A1B0GWB2 263 aa6.59□□□□□ -1.35
CLRN1-201ENST00000295911 A0A1W2PPM0 123 aa6.59□□□□□ -1.35
CLRN1-201ENST00000295911 IGKV2-29A2NJV5 120 aaPredicted RBP6.59□□□□□ -1.35
CLRN1-201ENST00000295911 H7C423 109 aa6.59□□□□□ -1.35
CLRN1-201ENST00000295911 FABP2P12104 132 aa6.59□□□□□ -1.35
CLRN1-201ENST00000295911 C12orf74Q32Q52 190 aa6.59□□□□□ -1.35
CLRN1-201ENST00000295911 OR5A1Q8NGJ0 315 aa6.59□□□□□ -1.35
CLRN1-201ENST00000295911 KIR2DL5BQ8NHK3 375 aa6.59□□□□□ -1.35
CLRN1-201ENST00000295911 CITED1Q99966 193 aa6.59□□□□□ -1.35
CLRN1-201ENST00000295911 K7EP34 96 aa6.59□□□□□ -1.36
CLRN1-201ENST00000295911 TIRAPP58753 221 aa6.59□□□□□ -1.36
CLRN1-201ENST00000295911 CEMP1Q6PRD7 247 aaPredicted RBP6.59□□□□□ -1.36
CLRN1-201ENST00000295911 GEMIN7Q9H840 131 aaKnown RBP6.59□□□□□ -1.36
CLRN1-201ENST00000295911 SETXQ7Z333 2677 aaKnown RBP6.58□□□□□ -1.36
CLRN1-201ENST00000295911 IGHV1-58A0A0C4DH39 117 aa6.58□□□□□ -1.36
CLRN1-201ENST00000295911 GAGE12JA6NER3 117 aa6.58□□□□□ -1.36
CLRN1-201ENST00000295911 K7EP13 123 aa6.58□□□□□ -1.36
CLRN1-201ENST00000295911 UBE2D1P51668 147 aa6.58□□□□□ -1.36
CLRN1-201ENST00000295911 TSPEAR-AS2P59090 65 aa6.58□□□□□ -1.36
CLRN1-201ENST00000295911 GAGE4Q13068 117 aa6.58□□□□□ -1.36
CLRN1-201ENST00000295911 GAGE5Q13069 117 aa6.58□□□□□ -1.36
CLRN1-201ENST00000295911 GAGE13Q4V321 117 aa6.58□□□□□ -1.36
CLRN1-201ENST00000295911 Q6ZUT4 128 aa6.58□□□□□ -1.36
CLRN1-201ENST00000295911 FAM19A3Q7Z5A8 133 aa6.58□□□□□ -1.36
CLRN1-201ENST00000295911 IGLL5B9A064 214 aa6.57□□□□□ -1.36
CLRN1-201ENST00000295911 UBE2L6O14933 153 aa6.57□□□□□ -1.36
CLRN1-201ENST00000295911 IGHV3-30-3P0DP02 117 aa6.57□□□□□ -1.36
CLRN1-201ENST00000295911 APOC4P55056 127 aa6.57□□□□□ -1.36
CLRN1-201ENST00000295911 HERVK_113P63121 156 aa6.57□□□□□ -1.36
CLRN1-201ENST00000295911 SBSPONQ8IVN8 264 aa6.57□□□□□ -1.36
CLRN1-201ENST00000295911 LINC00612Q8N6U2 182 aa6.57□□□□□ -1.36
CLRN1-201ENST00000295911 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.57□□□□□ -1.36
CLRN1-201ENST00000295911 TMEM101Q96IK0 257 aa6.57□□□□□ -1.36
CLRN1-201ENST00000295911 TMEM243Q9BU79 118 aa6.57□□□□□ -1.36
CLRN1-201ENST00000295911 SPCS1Q9Y6A9 102 aa6.57□□□□□ -1.36
CLRN1-201ENST00000295911 IGLV5-45A0A087WSX0 123 aa6.56□□□□□ -1.36
CLRN1-201ENST00000295911 TMEM238C9JI98 176 aa6.56□□□□□ -1.36
CLRN1-201ENST00000295911 K7ERJ3 54 aa6.56□□□□□ -1.36
CLRN1-201ENST00000295911 FHL2Q14192 279 aa6.56□□□□□ -1.36
CLRN1-201ENST00000295911 NTM-AS1Q6ZSK4 140 aa6.56□□□□□ -1.36
CLRN1-201ENST00000295911 WFDC9Q8NEX5 89 aa6.56□□□□□ -1.36
CLRN1-201ENST00000295911 VSIG2Q96IQ7 327 aa6.56□□□□□ -1.36
CLRN1-201ENST00000295911 SETD2Q9BYW2 2564 aaPredicted RBP6.55□□□□□ -1.36
CLRN1-201ENST00000295911 IGHV3-30P01768 117 aa6.55□□□□□ -1.36
CLRN1-201ENST00000295911 IGHV3-30-5P0DP03 117 aa6.55□□□□□ -1.36
CLRN1-201ENST00000295911 RNASE13Q5GAN3 156 aaKnown RBP6.55□□□□□ -1.36
CLRN1-201ENST00000295911 NAA38Q9BRA0 125 aaKnown RBP6.55□□□□□ -1.36
CLRN1-201ENST00000295911 IGHV3-64A0A075B6Q5 118 aa6.54□□□□□ -1.36
CLRN1-201ENST00000295911 LYRM9A8MSI8 78 aa6.54□□□□□ -1.36
CLRN1-201ENST00000295911 RPL24P83731 157 aaKnown RBP6.54□□□□□ -1.36
CLRN1-201ENST00000295911 CDC42SE2Q9NRR3 84 aa6.54□□□□□ -1.36
CLRN1-201ENST00000295911 HECTD1Q9ULT8 2610 aa6.54□□□□□ -1.36
CLRN1-201ENST00000295911 A0A0J9YXY3 114 aa6.53□□□□□ -1.36
CLRN1-201ENST00000295911 LINC00694P0DN24 101 aa6.53□□□□□ -1.36
CLRN1-201ENST00000295911 KRTAP4-9Q9BYQ8 210 aa6.53□□□□□ -1.36
CLRN1-201ENST00000295911 NDUFA12Q9UI09 145 aa6.53□□□□□ -1.36
CLRN1-201ENST00000295911 CUBNO60494 3623 aa6.53□□□□□ -1.36
CLRN1-201ENST00000295911 OTOGQ6ZRI0 2925 aa6.52□□□□□ -1.36
CLRN1-201ENST00000295911 TRBV6-8A0A0A6YYG3 113 aa6.52□□□□□ -1.37
CLRN1-201ENST00000295911 TRAV8-3A0A0A6YYJ7 113 aa6.52□□□□□ -1.37
CLRN1-201ENST00000295911 TIMM17BO60830 172 aa6.52□□□□□ -1.37
CLRN1-201ENST00000295911 SPINK8P0C7L1 97 aa6.52□□□□□ -1.37
CLRN1-201ENST00000295911 DEFB130BP0DP73 79 aa6.52□□□□□ -1.37
CLRN1-201ENST00000295911 DEFB130AP0DP74 79 aa6.52□□□□□ -1.37
CLRN1-201ENST00000295911 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.37
CLRN1-201ENST00000295911 LINC00242Q5T6M2 205 aa6.52□□□□□ -1.37
CLRN1-201ENST00000295911 LYRM7Q5U5X0 104 aa6.52□□□□□ -1.37
CLRN1-201ENST00000295911 ZFAND6Q6FIF0 208 aa6.52□□□□□ -1.37
CLRN1-201ENST00000295911 CDKN2A-AS1Q9UH64 79 aa6.52□□□□□ -1.37
CLRN1-201ENST00000295911 NSD1Q96L73 2696 aaPredicted RBP6.52□□□□□ -1.37
CLRN1-201ENST00000295911 C2CD3Q4AC94 2353 aa6.52□□□□□ -1.37
CLRN1-201ENST00000295911 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.51□□□□□ -1.37
CLRN1-201ENST00000295911 LOC100131303A0A0U1RQF7 123 aa6.51□□□□□ -1.37
CLRN1-201ENST00000295911 CIRBPQ14011 172 aaKnown RBP6.51□□□□□ -1.37
CLRN1-201ENST00000295911 C10orf126Q8N4M7 172 aa6.51□□□□□ -1.37
CLRN1-201ENST00000295911 SPANXDQ9BXN6 97 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms