RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 C4orf3Q8WVX3 66 aa14.13□□□□□ -0.15
NKX6-1-201ENST00000295886 CITED1Q99966 193 aa14.13□□□□□ -0.15
NKX6-1-201ENST00000295886 A0A0B4J2C4 111 aa14.13□□□□□ -0.15
NKX6-1-201ENST00000295886 NTN5Q8WTR8 489 aaPredicted RBP14.12□□□□□ -0.15
NKX6-1-201ENST00000295886 VSIG2Q96IQ7 327 aa14.12□□□□□ -0.15
NKX6-1-201ENST00000295886 INSP01308 110 aa14.11□□□□□ -0.15
NKX6-1-201ENST00000295886 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.11□□□□□ -0.15
NKX6-1-201ENST00000295886 CDKN2A-AS1Q9UH64 79 aa14.11□□□□□ -0.15
NKX6-1-201ENST00000295886 IGHV3-53P01767 116 aa14.11□□□□□ -0.15
NKX6-1-201ENST00000295886 GAGE5Q13069 117 aa14.11□□□□□ -0.15
NKX6-1-201ENST00000295886 GAGE6Q13070 117 aa14.11□□□□□ -0.15
NKX6-1-201ENST00000295886 SNCGO76070 127 aa14.11□□□□□ -0.15
NKX6-1-201ENST00000295886 Q8N2B8 174 aa14.11□□□□□ -0.15
NKX6-1-201ENST00000295886 SETXQ7Z333 2677 aaKnown RBP14.1□□□□□ -0.15
NKX6-1-201ENST00000295886 TINCRA0A1B0GVN0 87 aa14.1□□□□□ -0.15
NKX6-1-201ENST00000295886 NDUFA7O95182 113 aa14.1□□□□□ -0.15
NKX6-1-201ENST00000295886 GAGE2BQ13066 116 aa14.1□□□□□ -0.15
NKX6-1-201ENST00000295886 ODF3L2Q3SX64 289 aa14.1□□□□□ -0.15
NKX6-1-201ENST00000295886 GAGE2EQ4V326 116 aa14.1□□□□□ -0.15
NKX6-1-201ENST00000295886 GAGE2DQ9UEU5 116 aa14.1□□□□□ -0.15
NKX6-1-201ENST00000295886 B5MCH6 92 aa14.1□□□□□ -0.15
NKX6-1-201ENST00000295886 TRIAP1O43715 76 aa14.1□□□□□ -0.15
NKX6-1-201ENST00000295886 DEFB113Q30KQ7 82 aa14.1□□□□□ -0.15
NKX6-1-201ENST00000295886 SPANXA1Q9NS26 97 aa14.1□□□□□ -0.15
NKX6-1-201ENST00000295886 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.09□□□□□ -0.15
NKX6-1-201ENST00000295886 TRAV4A0A0B4J268 109 aa14.09□□□□□ -0.15
NKX6-1-201ENST00000295886 FLNAP21333 2647 aaKnown RBP14.09□□□□□ -0.15
NKX6-1-201ENST00000295886 TRGV1A0A0A0MS02 117 aa14.09□□□□□ -0.15
NKX6-1-201ENST00000295886 CRLF1O75462 422 aa14.09□□□□□ -0.15
NKX6-1-201ENST00000295886 NHLRC4P0CG21 123 aaPredicted RBP14.09□□□□□ -0.15
NKX6-1-201ENST00000295886 M0QXV9 152 aa14.08□□□□□ -0.16
NKX6-1-201ENST00000295886 COX6A2Q02221 97 aa14.08□□□□□ -0.16
NKX6-1-201ENST00000295886 A0A0U1RRA0 63 aa14.08□□□□□ -0.16
NKX6-1-201ENST00000295886 ATXN8Q156A1 80 aa14.08□□□□□ -0.16
NKX6-1-201ENST00000295886 LINC01620Q4KN68 170 aa14.08□□□□□ -0.16
NKX6-1-201ENST00000295886 DGAT2L7PQ6IED9 249 aa14.08□□□□□ -0.16
NKX6-1-201ENST00000295886 LINC00694P0DN24 101 aa14.07□□□□□ -0.16
NKX6-1-201ENST00000295886 ZNF625Q96I27 306 aaPredicted RBP14.07□□□□□ -0.16
NKX6-1-201ENST00000295886 C1orf158Q8N1D5 194 aa14.07□□□□□ -0.16
NKX6-1-201ENST00000295886 TEX49A0A1B0GTD5 131 aa14.06□□□□□ -0.16
NKX6-1-201ENST00000295886 RS1O15537 224 aa14.06□□□□□ -0.16
NKX6-1-201ENST00000295886 BEAN1Q3B7T3 259 aa14.06□□□□□ -0.16
NKX6-1-201ENST00000295886 STHQ8IWL8 128 aa14.06□□□□□ -0.16
NKX6-1-201ENST00000295886 NDUFV3P56181 108 aaKnown RBP14.05□□□□□ -0.16
NKX6-1-201ENST00000295886 MIAQ16674 131 aa14.05□□□□□ -0.16
NKX6-1-201ENST00000295886 Q6ZTI0 123 aa14.04□□□□□ -0.16
NKX6-1-201ENST00000295886 ACANP16112 2415 aa14.04□□□□□ -0.16
NKX6-1-201ENST00000295886 MTORP42345 2549 aa14.04□□□□□ -0.16
NKX6-1-201ENST00000295886 TTC32Q5I0X7 151 aa14.04□□□□□ -0.16
NKX6-1-201ENST00000295886 PIK3CD-AS1Q5SR53 167 aa14.04□□□□□ -0.16
NKX6-1-201ENST00000295886 TMEM101Q96IK0 257 aa14.04□□□□□ -0.16
NKX6-1-201ENST00000295886 TRAV8-4A0A0B4J246 113 aa14.03□□□□□ -0.16
NKX6-1-201ENST00000295886 SPANXDQ9BXN6 97 aa14.03□□□□□ -0.16
NKX6-1-201ENST00000295886 SPANXCQ9NY87 97 aa14.03□□□□□ -0.16
NKX6-1-201ENST00000295886 CLEC2BQ92478 149 aa14.02□□□□□ -0.16
NKX6-1-201ENST00000295886 DNAJC30Q96LL9 226 aa14.02□□□□□ -0.16
NKX6-1-201ENST00000295886 ICOSQ9Y6W8 199 aa14.02□□□□□ -0.16
NKX6-1-201ENST00000295886 TRAV13-1A0A0B4J241 112 aa14.02□□□□□ -0.17
NKX6-1-201ENST00000295886 KRTAP1-3Q8IUG1 177 aa14.02□□□□□ -0.17
NKX6-1-201ENST00000295886 ZNF843Q8N446 348 aa14.01□□□□□ -0.17
NKX6-1-201ENST00000295886 TRBV10-2A0A0K0K1G8 114 aa14.01□□□□□ -0.17
NKX6-1-201ENST00000295886 IFITM1P13164 125 aa14.01□□□□□ -0.17
NKX6-1-201ENST00000295886 WFDC10AQ9H1F0 79 aa14.01□□□□□ -0.17
NKX6-1-201ENST00000295886 TRBV30A0A0K0K1B3 111 aa14□□□□□ -0.17
NKX6-1-201ENST00000295886 DNAJC9-AS1A6NH13 148 aa14□□□□□ -0.17
NKX6-1-201ENST00000295886 CCDC179H3BU77 68 aa14□□□□□ -0.17
NKX6-1-201ENST00000295886 LINC00242Q5T6M2 205 aa14□□□□□ -0.17
NKX6-1-201ENST00000295886 NTM-AS1Q6ZSK4 140 aa14□□□□□ -0.17
NKX6-1-201ENST00000295886 C15orf53Q8NAA6 179 aa14□□□□□ -0.17
NKX6-1-201ENST00000295886 WFDC11Q8NEX6 87 aa14□□□□□ -0.17
NKX6-1-201ENST00000295886 UBE2WQ96B02 151 aa14□□□□□ -0.17
NKX6-1-201ENST00000295886 GAGE12JA6NER3 117 aa13.99□□□□□ -0.17
NKX6-1-201ENST00000295886 GAGE4Q13068 117 aa13.99□□□□□ -0.17
NKX6-1-201ENST00000295886 Q9H8V8 135 aa13.99□□□□□ -0.17
NKX6-1-201ENST00000295886 GAGE7O76087 117 aa13.99□□□□□ -0.17
NKX6-1-201ENST00000295886 GAGE12FP0CL80 117 aa13.99□□□□□ -0.17
NKX6-1-201ENST00000295886 GAGE12GP0CL81 117 aa13.99□□□□□ -0.17
NKX6-1-201ENST00000295886 GAGE12IP0CL82 117 aa13.99□□□□□ -0.17
NKX6-1-201ENST00000295886 RPL13AP40429 203 aaKnown RBP13.99□□□□□ -0.17
NKX6-1-201ENST00000295886 ESM1Q9NQ30 184 aa13.99□□□□□ -0.17
NKX6-1-201ENST00000295886 CCL24O00175 119 aa13.98□□□□□ -0.17
NKX6-1-201ENST00000295886 HIST2H2BCQ6DN03 193 aa13.98□□□□□ -0.17
NKX6-1-201ENST00000295886 C2orf82Q6UX34 121 aa13.98□□□□□ -0.17
NKX6-1-201ENST00000295886 NOP10Q9NPE3 64 aaKnown RBP13.98□□□□□ -0.17
NKX6-1-201ENST00000295886 PLA2G2AP14555 144 aa13.96□□□□□ -0.17
NKX6-1-201ENST00000295886 CITED2Q99967 270 aaPredicted RBP13.96□□□□□ -0.17
NKX6-1-201ENST00000295886 NDUFA1O15239 70 aa13.96□□□□□ -0.17
NKX6-1-201ENST00000295886 TIRAPP58753 221 aa13.96□□□□□ -0.17
NKX6-1-201ENST00000295886 IGLV5-45A0A087WSX0 123 aa13.95□□□□□ -0.18
NKX6-1-201ENST00000295886 K7EQD1 137 aa13.95□□□□□ -0.18
NKX6-1-201ENST00000295886 H7C423 109 aa13.95□□□□□ -0.18
NKX6-1-201ENST00000295886 RPL36AP83881 106 aaKnown RBP13.95□□□□□ -0.18
NKX6-1-201ENST00000295886 IL17DQ8TAD2 202 aa13.95□□□□□ -0.18
NKX6-1-201ENST00000295886 RPL36ALQ969Q0 106 aaKnown RBP13.95□□□□□ -0.18
NKX6-1-201ENST00000295886 LOC100131303A0A0U1RQF7 123 aa13.94□□□□□ -0.18
NKX6-1-201ENST00000295886 Q6Q795 121 aa13.94□□□□□ -0.18
NKX6-1-201ENST00000295886 TENM4Q6N022 2769 aa13.94□□□□□ -0.18
NKX6-1-201ENST00000295886 RPL35AP18077 110 aaKnown RBP13.94□□□□□ -0.18
NKX6-1-201ENST00000295886 LINC01600Q96MT4 127 aa13.94□□□□□ -0.18
NKX6-1-201ENST00000295886 SMIM1B2RUZ4 78 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms