RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 HIST1H4GQ99525 98 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 A0A0J9YXV3 536 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 H3BRM9 83 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 UBE2D3P61077 147 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 UBE2D2P62837 147 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 VAMP3Q15836 100 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 APOC4P55056 127 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 SMAGPQ0VAQ4 97 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 TIMM21Q9BVV7 248 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 TM2D2Q9BX73 214 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 PGPEP1Q9NXJ5 209 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 ZNF22P17026 224 aaPredicted RBP6.49□□□□□ -1.37
PDPN-201ENST00000294489 LGALS3P17931 250 aaKnown RBP6.49□□□□□ -1.37
PDPN-201ENST00000294489 MRPS36P82909 103 aaKnown RBP6.49□□□□□ -1.37
PDPN-201ENST00000294489 TMEM223A0PJW6 202 aa6.49□□□□□ -1.37
PDPN-201ENST00000294489 FXYD2P54710 66 aa6.49□□□□□ -1.37
PDPN-201ENST00000294489 KRTAP10-11P60412 298 aa6.49□□□□□ -1.37
PDPN-201ENST00000294489 FAM104AQ969W3 186 aa6.49□□□□□ -1.37
PDPN-201ENST00000294489 TRAV26-1A0A087WT03 109 aa6.48□□□□□ -1.37
PDPN-201ENST00000294489 J3QQQ9 107 aa6.48□□□□□ -1.37
PDPN-201ENST00000294489 SMIM13P0DJ93 91 aa6.48□□□□□ -1.37
PDPN-201ENST00000294489 RNASE13Q5GAN3 156 aaKnown RBP6.48□□□□□ -1.37
PDPN-201ENST00000294489 Q6ZUT4 128 aa6.48□□□□□ -1.37
PDPN-201ENST00000294489 ATRQ13535 2644 aa6.48□□□□□ -1.37
PDPN-201ENST00000294489 LEPROTO15243 131 aa6.48□□□□□ -1.37
PDPN-201ENST00000294489 DEFB130BP0DP73 79 aa6.48□□□□□ -1.37
PDPN-201ENST00000294489 DEFB130AP0DP74 79 aa6.48□□□□□ -1.37
PDPN-201ENST00000294489 UBE2V1Q13404 147 aa6.48□□□□□ -1.37
PDPN-201ENST00000294489 GTSF1LQ9H1H1 148 aa6.48□□□□□ -1.37
PDPN-201ENST00000294489 TRRAPQ9Y4A5 3859 aa6.48□□□□□ -1.37
PDPN-201ENST00000294489 ANK2Q01484 3957 aa6.48□□□□□ -1.37
PDPN-201ENST00000294489 TINCRA0A1B0GVN0 87 aa6.47□□□□□ -1.37
PDPN-201ENST00000294489 PLEKHB2Q96CS7 222 aa6.47□□□□□ -1.37
PDPN-201ENST00000294489 C9orf118A6NHY6 69 aa6.47□□□□□ -1.37
PDPN-201ENST00000294489 SRSF9Q13242 221 aaKnown RBP eCLIP6.47□□□□□ -1.37
PDPN-201ENST00000294489 FHL2Q14192 279 aa6.47□□□□□ -1.37
PDPN-201ENST00000294489 CSDC2Q9Y534 153 aaKnown RBP6.47□□□□□ -1.37
PDPN-201ENST00000294489 UBE2L6O14933 153 aa6.47□□□□□ -1.37
PDPN-201ENST00000294489 IGHV4-30-4P0DP06 118 aa6.47□□□□□ -1.37
PDPN-201ENST00000294489 NTM-AS1Q6ZSK4 140 aa6.47□□□□□ -1.37
PDPN-201ENST00000294489 RAB37Q96AX2 223 aa6.47□□□□□ -1.37
PDPN-201ENST00000294489 GEMIN7Q9H840 131 aaKnown RBP6.47□□□□□ -1.37
PDPN-201ENST00000294489 NHP2Q9NX24 153 aaKnown RBP6.47□□□□□ -1.37
PDPN-201ENST00000294489 K7EP13 123 aa6.46□□□□□ -1.37
PDPN-201ENST00000294489 TSPEAR-AS2P59090 65 aa6.46□□□□□ -1.37
PDPN-201ENST00000294489 TMEM243Q9BU79 118 aa6.46□□□□□ -1.37
PDPN-201ENST00000294489 DEFB135Q30KP9 77 aa6.46□□□□□ -1.38
PDPN-201ENST00000294489 AMMECR1LQ6DCA0 310 aa6.46□□□□□ -1.38
PDPN-201ENST00000294489 RNF183Q96D59 192 aa6.46□□□□□ -1.38
PDPN-201ENST00000294489 IGHV3-64A0A075B6Q5 118 aa6.45□□□□□ -1.38
PDPN-201ENST00000294489 LOC100131303A0A0U1RQF7 123 aa6.45□□□□□ -1.38
PDPN-201ENST00000294489 LYRM9A8MSI8 78 aa6.45□□□□□ -1.38
PDPN-201ENST00000294489 LINC00694P0DN24 101 aa6.45□□□□□ -1.38
PDPN-201ENST00000294489 UBE2D1P51668 147 aa6.45□□□□□ -1.38
PDPN-201ENST00000294489 OXLD1Q5BKU9 147 aa6.45□□□□□ -1.38
PDPN-201ENST00000294489 OR5A1Q8NGJ0 315 aa6.45□□□□□ -1.38
PDPN-201ENST00000294489 A0A0J9YY99 117 aa6.45□□□□□ -1.38
PDPN-201ENST00000294489 H3BUT2 72 aa6.45□□□□□ -1.38
PDPN-201ENST00000294489 H7C423 109 aa6.45□□□□□ -1.38
PDPN-201ENST00000294489 TMEM101Q96IK0 257 aa6.45□□□□□ -1.38
PDPN-201ENST00000294489 CCL25O15444 150 aa6.45□□□□□ -1.38
PDPN-201ENST00000294489 SBSPONQ8IVN8 264 aa6.45□□□□□ -1.38
PDPN-201ENST00000294489 IGHV1-58A0A0C4DH39 117 aa6.44□□□□□ -1.38
PDPN-201ENST00000294489 TIRAPP58753 221 aa6.44□□□□□ -1.38
PDPN-201ENST00000294489 SAMD5Q5TGI4 173 aa6.44□□□□□ -1.38
PDPN-201ENST00000294489 Q8NAQ8 132 aa6.44□□□□□ -1.38
PDPN-201ENST00000294489 IGHV3-30-3P0DP02 117 aa6.44□□□□□ -1.38
PDPN-201ENST00000294489 MIFP14174 115 aa6.44□□□□□ -1.38
PDPN-201ENST00000294489 HERVK_113P63121 156 aa6.44□□□□□ -1.38
PDPN-201ENST00000294489 FAM222AQ5U5X8 452 aa6.44□□□□□ -1.38
PDPN-201ENST00000294489 SPANXB1Q9NS25 103 aaPredicted RBP6.44□□□□□ -1.38
PDPN-201ENST00000294489 K7ERJ3 54 aa6.43□□□□□ -1.38
PDPN-201ENST00000294489 C12orf74Q32Q52 190 aa6.43□□□□□ -1.38
PDPN-201ENST00000294489 GTF2H5Q6ZYL4 71 aa6.43□□□□□ -1.38
PDPN-201ENST00000294489 CDC42SE2Q9NRR3 84 aa6.43□□□□□ -1.38
PDPN-201ENST00000294489 PRO0255Q9UI72 69 aa6.43□□□□□ -1.38
PDPN-201ENST00000294489 TRBV6-8A0A0A6YYG3 113 aa6.43□□□□□ -1.38
PDPN-201ENST00000294489 GAGE10A6NGK3 116 aa6.43□□□□□ -1.38
PDPN-201ENST00000294489 VSIG2Q96IQ7 327 aa6.43□□□□□ -1.38
PDPN-201ENST00000294489 TRAV8-3A0A0A6YYJ7 113 aa6.42□□□□□ -1.38
PDPN-201ENST00000294489 A0A1W2PPM0 123 aa6.42□□□□□ -1.38
PDPN-201ENST00000294489 FABP2P12104 132 aa6.42□□□□□ -1.38
PDPN-201ENST00000294489 NAA38Q9BRA0 125 aaKnown RBP6.42□□□□□ -1.38
PDPN-201ENST00000294489 IGLV5-45A0A087WSX0 123 aa6.42□□□□□ -1.38
PDPN-201ENST00000294489 TRAV13-1A0A0B4J241 112 aa6.42□□□□□ -1.38
PDPN-201ENST00000294489 IGHV4-28A0A0C4DH34 117 aa6.42□□□□□ -1.38
PDPN-201ENST00000294489 SPINK8P0C7L1 97 aa6.42□□□□□ -1.38
PDPN-201ENST00000294489 GYPEP15421 78 aa6.42□□□□□ -1.38
PDPN-201ENST00000294489 CDKN2A-AS1Q9UH64 79 aa6.42□□□□□ -1.38
PDPN-201ENST00000294489 A0A1B0GWB2 263 aa6.41□□□□□ -1.38
PDPN-201ENST00000294489 LINC00242Q5T6M2 205 aa6.41□□□□□ -1.38
PDPN-201ENST00000294489 FAM19A3Q7Z5A8 133 aa6.41□□□□□ -1.38
PDPN-201ENST00000294489 ATP6V0E2Q8NHE4 81 aa6.41□□□□□ -1.38
PDPN-201ENST00000294489 CHCHD5Q9BSY4 110 aa6.41□□□□□ -1.38
PDPN-201ENST00000294489 DAD1P61803 113 aa6.41□□□□□ -1.38
PDPN-201ENST00000294489 NDUFA12Q9UI09 145 aa6.41□□□□□ -1.38
PDPN-201ENST00000294489 M0QXV9 152 aa6.41□□□□□ -1.38
PDPN-201ENST00000294489 DEFB4AO15263 64 aa6.41□□□□□ -1.38
PDPN-201ENST00000294489 GAGE6Q13070 117 aa6.41□□□□□ -1.38
PDPN-201ENST00000294489 KPRPQ5T749 579 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms