RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 GAGE4Q13068 117 aa10.01□□□□□ -0.81
NXF1-201ENST00000294172 GAGE5Q13069 117 aa10.01□□□□□ -0.81
NXF1-201ENST00000294172 GAGE13Q4V321 117 aa10.01□□□□□ -0.81
NXF1-201ENST00000294172 NBEAL2Q6ZNJ1 2754 aa10.01□□□□□ -0.81
NXF1-201ENST00000294172 LEPROTO15243 131 aa10□□□□□ -0.81
NXF1-201ENST00000294172 SPATA3Q8NHX4 192 aa10□□□□□ -0.81
NXF1-201ENST00000294172 DGAT2L7PQ6IED9 249 aa10□□□□□ -0.81
NXF1-201ENST00000294172 TRBV10-1A0A0K0K1A3 114 aa9.99□□□□□ -0.81
NXF1-201ENST00000294172 CRYBA4P53673 196 aa9.99□□□□□ -0.81
NXF1-201ENST00000294172 MRPS36P82909 103 aaKnown RBP9.99□□□□□ -0.81
NXF1-201ENST00000294172 G3V4G9 280 aa9.99□□□□□ -0.81
NXF1-201ENST00000294172 A0A1B0GWB2 263 aa9.98□□□□□ -0.81
NXF1-201ENST00000294172 RPL24P83731 157 aaKnown RBP9.98□□□□□ -0.81
NXF1-201ENST00000294172 DAZ4Q86SG3 579 aaKnown RBP9.98□□□□□ -0.81
NXF1-201ENST00000294172 TIMM21Q9BVV7 248 aa9.98□□□□□ -0.81
NXF1-201ENST00000294172 DAZ3Q9NR90 486 aaKnown RBP9.98□□□□□ -0.81
NXF1-201ENST00000294172 FLNBO75369 2602 aaKnown RBP9.97□□□□□ -0.81
NXF1-201ENST00000294172 TRAV8-3A0A0A6YYJ7 113 aa9.97□□□□□ -0.81
NXF1-201ENST00000294172 H3BMG7 143 aa9.97□□□□□ -0.81
NXF1-201ENST00000294172 CIDEAO60543 219 aa9.97□□□□□ -0.81
NXF1-201ENST00000294172 LINC00694P0DN24 101 aa9.97□□□□□ -0.81
NXF1-201ENST00000294172 TEP1Q99973 2627 aaKnown RBP9.97□□□□□ -0.81
NXF1-201ENST00000294172 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.81
NXF1-201ENST00000294172 TINCRA0A1B0GVN0 87 aa9.96□□□□□ -0.81
NXF1-201ENST00000294172 IGHV3-30-3P0DP02 117 aa9.96□□□□□ -0.81
NXF1-201ENST00000294172 UBE2D3P61077 147 aa9.96□□□□□ -0.81
NXF1-201ENST00000294172 UBE2D2P62837 147 aa9.96□□□□□ -0.81
NXF1-201ENST00000294172 NTM-AS1Q6ZSK4 140 aa9.96□□□□□ -0.81
NXF1-201ENST00000294172 OVOL2Q9BRP0 275 aa9.96□□□□□ -0.81
NXF1-201ENST00000294172 LOC100131303A0A0U1RQF7 123 aa9.96□□□□□ -0.82
NXF1-201ENST00000294172 CRLF1O75462 422 aa9.96□□□□□ -0.82
NXF1-201ENST00000294172 GEMIN7Q9H840 131 aaKnown RBP9.96□□□□□ -0.82
NXF1-201ENST00000294172 PGPEP1Q9NXJ5 209 aa9.96□□□□□ -0.82
NXF1-201ENST00000294172 SPINK8P0C7L1 97 aa9.95□□□□□ -0.82
NXF1-201ENST00000294172 WFDC2Q14508 124 aa9.95□□□□□ -0.82
NXF1-201ENST00000294172 APOMO95445 188 aa9.94□□□□□ -0.82
NXF1-201ENST00000294172 IGHV3-30P01768 117 aa9.94□□□□□ -0.82
NXF1-201ENST00000294172 IGHV3-30-5P0DP03 117 aa9.94□□□□□ -0.82
NXF1-201ENST00000294172 DEFB130BP0DP73 79 aa9.94□□□□□ -0.82
NXF1-201ENST00000294172 DEFB130AP0DP74 79 aa9.94□□□□□ -0.82
NXF1-201ENST00000294172 UBE2D1P51668 147 aa9.94□□□□□ -0.82
NXF1-201ENST00000294172 C9orf66Q5T8R8 295 aa9.94□□□□□ -0.82
NXF1-201ENST00000294172 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.94□□□□□ -0.82
NXF1-201ENST00000294172 SPANXB1Q9NS25 103 aaPredicted RBP9.94□□□□□ -0.82
NXF1-201ENST00000294172 TRRAPQ9Y4A5 3859 aa9.94□□□□□ -0.82
NXF1-201ENST00000294172 TEX48A0A1B0GUV7 120 aa9.94□□□□□ -0.82
NXF1-201ENST00000294172 A8MZ25 164 aa9.94□□□□□ -0.82
NXF1-201ENST00000294172 F8W1H4 67 aa9.94□□□□□ -0.82
NXF1-201ENST00000294172 INSL3P51460 131 aa9.94□□□□□ -0.82
NXF1-201ENST00000294172 C10orf126Q8N4M7 172 aa9.94□□□□□ -0.82
NXF1-201ENST00000294172 IGHV1-58A0A0C4DH39 117 aa9.93□□□□□ -0.82
NXF1-201ENST00000294172 TRBV6-4A0A1B0GX49 114 aa9.93□□□□□ -0.82
NXF1-201ENST00000294172 SFTA2Q6UW10 78 aa9.93□□□□□ -0.82
NXF1-201ENST00000294172 MTURNQ8N3F0 131 aa9.93□□□□□ -0.82
NXF1-201ENST00000294172 VSIG2Q96IQ7 327 aa9.92□□□□□ -0.82
NXF1-201ENST00000294172 CDKN2A-AS1Q9UH64 79 aa9.92□□□□□ -0.82
NXF1-201ENST00000294172 A0A0J9YXY3 114 aa9.91□□□□□ -0.82
NXF1-201ENST00000294172 UBE2L6O14933 153 aa9.91□□□□□ -0.82
NXF1-201ENST00000294172 FHL2Q14192 279 aa9.91□□□□□ -0.82
NXF1-201ENST00000294172 TRAV13-1A0A0B4J241 112 aa9.91□□□□□ -0.82
NXF1-201ENST00000294172 COX6A2Q02221 97 aa9.91□□□□□ -0.82
NXF1-201ENST00000294172 LOC107984156A0A0G2JMH3 177 aa9.9□□□□□ -0.82
NXF1-201ENST00000294172 TSPAN13O95857 204 aa9.9□□□□□ -0.82
NXF1-201ENST00000294172 SBSPONQ8IVN8 264 aa9.9□□□□□ -0.82
NXF1-201ENST00000294172 ARL17AQ8IVW1 177 aa9.9□□□□□ -0.82
NXF1-201ENST00000294172 TMEM243Q9BU79 118 aa9.9□□□□□ -0.82
NXF1-201ENST00000294172 NDUFA12Q9UI09 145 aa9.9□□□□□ -0.82
NXF1-201ENST00000294172 F8P00451 2351 aa9.9□□□□□ -0.82
NXF1-201ENST00000294172 SH2D6Q7Z4S9 175 aa9.9□□□□□ -0.82
NXF1-201ENST00000294172 CITED1Q99966 193 aa9.9□□□□□ -0.82
NXF1-201ENST00000294172 TMEM238C9JI98 176 aa9.89□□□□□ -0.83
NXF1-201ENST00000294172 TIRAPP58753 221 aa9.89□□□□□ -0.83
NXF1-201ENST00000294172 ETDBQ3ZM63 59 aa9.89□□□□□ -0.83
NXF1-201ENST00000294172 LINC00242Q5T6M2 205 aa9.89□□□□□ -0.83
NXF1-201ENST00000294172 GTSF1LQ9H1H1 148 aa9.89□□□□□ -0.83
NXF1-201ENST00000294172 CFC1BP0CG36 223 aa9.89□□□□□ -0.83
NXF1-201ENST00000294172 CFC1P0CG37 223 aa9.89□□□□□ -0.83
NXF1-201ENST00000294172 MUSTN1Q8IVN3 82 aa9.89□□□□□ -0.83
NXF1-201ENST00000294172 CDC42SE2Q9NRR3 84 aa9.89□□□□□ -0.83
NXF1-201ENST00000294172 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
NXF1-201ENST00000294172 X6R8D5 127 aa9.89□□□□□ -0.83
NXF1-201ENST00000294172 PSMB2P49721 201 aa9.88□□□□□ -0.83
NXF1-201ENST00000294172 TMEM101Q96IK0 257 aa9.88□□□□□ -0.83
NXF1-201ENST00000294172 A4D1N5 150 aa9.88□□□□□ -0.83
NXF1-201ENST00000294172 HERVK_113P63121 156 aa9.88□□□□□ -0.83
NXF1-201ENST00000294172 PRO0461Q9UI25 63 aa9.88□□□□□ -0.83
NXF1-201ENST00000294172 PRSS2P07478 247 aa9.87□□□□□ -0.83
NXF1-201ENST00000294172 SMAGPQ0VAQ4 97 aa9.87□□□□□ -0.83
NXF1-201ENST00000294172 DEFB135Q30KP9 77 aa9.87□□□□□ -0.83
NXF1-201ENST00000294172 IGLV5-45A0A087WSX0 123 aa9.87□□□□□ -0.83
NXF1-201ENST00000294172 GAGE6Q13070 117 aa9.87□□□□□ -0.83
NXF1-201ENST00000294172 KIR2DL5BQ8NHK3 375 aa9.87□□□□□ -0.83
NXF1-201ENST00000294172 DEFB4AO15263 64 aa9.86□□□□□ -0.83
NXF1-201ENST00000294172 ADAMTSL4-AS1Q5T5F5 129 aa9.85□□□□□ -0.83
NXF1-201ENST00000294172 ZFAND6Q6FIF0 208 aa9.85□□□□□ -0.83
NXF1-201ENST00000294172 TRBV6-8A0A0A6YYG3 113 aa9.85□□□□□ -0.83
NXF1-201ENST00000294172 IGKV3OR2-268A0A0C4DH90 116 aa9.85□□□□□ -0.83
NXF1-201ENST00000294172 SMIM9A6NGZ8 99 aa9.85□□□□□ -0.83
NXF1-201ENST00000294172 LITAFQ99732 161 aa9.85□□□□□ -0.83
NXF1-201ENST00000294172 CHCHD5Q9BSY4 110 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms