RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 F8P00451 2351 aa9.44□□□□□ -0.9
SLC6A1-201ENST00000287766 NDUFA7O95182 113 aa9.44□□□□□ -0.9
SLC6A1-201ENST00000287766 C20orf203Q8NBC4 194 aa9.44□□□□□ -0.9
SLC6A1-201ENST00000287766 VSIG2Q96IQ7 327 aa9.44□□□□□ -0.9
SLC6A1-201ENST00000287766 IGHV3-33P01772 117 aa9.44□□□□□ -0.9
SLC6A1-201ENST00000287766 EBI3Q14213 229 aa9.44□□□□□ -0.9
SLC6A1-201ENST00000287766 NOP10Q9NPE3 64 aaKnown RBP9.44□□□□□ -0.9
SLC6A1-201ENST00000287766 AGRNO00468 2067 aa9.44□□□□□ -0.9
SLC6A1-201ENST00000287766 F8W735 103 aaPredicted RBP9.44□□□□□ -0.9
SLC6A1-201ENST00000287766 WFDC11Q8NEX6 87 aa9.44□□□□□ -0.9
SLC6A1-201ENST00000287766 UFSP1Q6NVU6 142 aa9.44□□□□□ -0.9
SLC6A1-201ENST00000287766 Q8N6K4 173 aa9.44□□□□□ -0.9
SLC6A1-201ENST00000287766 LINC01619G3V211 115 aa9.43□□□□□ -0.9
SLC6A1-201ENST00000287766 GATA3P23771 443 aa9.43□□□□□ -0.9
SLC6A1-201ENST00000287766 NREPQ16612 68 aa9.43□□□□□ -0.9
SLC6A1-201ENST00000287766 CMC4P56277 68 aaPredicted RBP9.43□□□□□ -0.9
SLC6A1-201ENST00000287766 SPTSSBQ8NFR3 76 aa9.43□□□□□ -0.9
SLC6A1-201ENST00000287766 JMJD7-PLA2G4BH0Y9G9 81 aa9.43□□□□□ -0.9
SLC6A1-201ENST00000287766 NFE4Q86UQ8 179 aa9.43□□□□□ -0.9
SLC6A1-201ENST00000287766 ZNF292O60281 2723 aa9.42□□□□□ -0.9
SLC6A1-201ENST00000287766 VPREB3Q9UKI3 123 aa9.42□□□□□ -0.9
SLC6A1-201ENST00000287766 P0DMU3 169 aa9.42□□□□□ -0.9
SLC6A1-201ENST00000287766 FAM231AP0DMU4 169 aa9.42□□□□□ -0.9
SLC6A1-201ENST00000287766 FAM231CP0DMU5 169 aa9.42□□□□□ -0.9
SLC6A1-201ENST00000287766 ZFAND2AQ8N6M9 145 aa9.42□□□□□ -0.9
SLC6A1-201ENST00000287766 H3BUA1 57 aa9.42□□□□□ -0.9
SLC6A1-201ENST00000287766 NEXN-AS1Q8NBZ9 246 aa9.42□□□□□ -0.9
SLC6A1-201ENST00000287766 EDN2P20800 178 aa9.41□□□□□ -0.9
SLC6A1-201ENST00000287766 CLPSL1A2RUU4 121 aa9.41□□□□□ -0.9
SLC6A1-201ENST00000287766 MIAQ16674 131 aa9.41□□□□□ -0.9
SLC6A1-201ENST00000287766 FAM236DA0A1B0GTK5 79 aa9.41□□□□□ -0.9
SLC6A1-201ENST00000287766 LINC00694P0DN24 101 aa9.41□□□□□ -0.9
SLC6A1-201ENST00000287766 FAM236CP0DP71 79 aa9.41□□□□□ -0.9
SLC6A1-201ENST00000287766 A6NDX4 124 aa9.41□□□□□ -0.9
SLC6A1-201ENST00000287766 COX7A2LO14548 114 aa9.4□□□□□ -0.9
SLC6A1-201ENST00000287766 PRM2P04554 102 aa9.4□□□□□ -0.9
SLC6A1-201ENST00000287766 U3KQK5 164 aa9.4□□□□□ -0.9
SLC6A1-201ENST00000287766 ELANEP08246 267 aa9.4□□□□□ -0.9
SLC6A1-201ENST00000287766 AKAP13Q12802 2813 aa9.4□□□□□ -0.91
SLC6A1-201ENST00000287766 SLPIP03973 132 aa9.39□□□□□ -0.91
SLC6A1-201ENST00000287766 UPK3BQ9BT76 320 aa9.39□□□□□ -0.91
SLC6A1-201ENST00000287766 A0A096LNJ9 63 aa9.39□□□□□ -0.91
SLC6A1-201ENST00000287766 HRCT1Q6UXD1 115 aa9.39□□□□□ -0.91
SLC6A1-201ENST00000287766 ADGRG4Q8IZF6 3080 aa9.39□□□□□ -0.91
SLC6A1-201ENST00000287766 FUSP35637 526 aaKnown RBP eCLIP9.39□□□□□ -0.91
SLC6A1-201ENST00000287766 CDKN2A-AS1Q9UH64 79 aa9.39□□□□□ -0.91
SLC6A1-201ENST00000287766 V9GYY9 64 aa9.39□□□□□ -0.91
SLC6A1-201ENST00000287766 ANKRD17O75179 2603 aaKnown RBP9.38□□□□□ -0.91
SLC6A1-201ENST00000287766 ENHOQ6UWT2 76 aa9.38□□□□□ -0.91
SLC6A1-201ENST00000287766 SCXQ7RTU7 201 aa9.38□□□□□ -0.91
SLC6A1-201ENST00000287766 NRACQ8N912 160 aa9.37□□□□□ -0.91
SLC6A1-201ENST00000287766 A0A0J9YX75 114 aa9.37□□□□□ -0.91
SLC6A1-201ENST00000287766 ZNF22P17026 224 aaPredicted RBP9.37□□□□□ -0.91
SLC6A1-201ENST00000287766 MUC4Q99102 2169 aa9.37□□□□□ -0.91
SLC6A1-201ENST00000287766 A8MZ25 164 aa9.37□□□□□ -0.91
SLC6A1-201ENST00000287766 USP17L23D6RBM5 183 aa9.36□□□□□ -0.91
SLC6A1-201ENST00000287766 GPHB5Q86YW7 130 aa9.36□□□□□ -0.91
SLC6A1-201ENST00000287766 NDUFS5O43920 106 aa9.36□□□□□ -0.91
SLC6A1-201ENST00000287766 CFAP47Q6ZTR5 3102 aa9.36□□□□□ -0.91
SLC6A1-201ENST00000287766 NCR3O14931 201 aa9.36□□□□□ -0.91
SLC6A1-201ENST00000287766 PIK3CD-AS1Q5SR53 167 aa9.36□□□□□ -0.91
SLC6A1-201ENST00000287766 ESM1Q9NQ30 184 aa9.36□□□□□ -0.91
SLC6A1-201ENST00000287766 AVPP01185 164 aa9.35□□□□□ -0.91
SLC6A1-201ENST00000287766 PROK1P58294 105 aa9.35□□□□□ -0.91
SLC6A1-201ENST00000287766 LOC400499M0QZD8 3231 aa9.35□□□□□ -0.91
SLC6A1-201ENST00000287766 TRBV30A0A0K0K1B3 111 aa9.35□□□□□ -0.91
SLC6A1-201ENST00000287766 TMEM256-PLSCR3K7ERE1 68 aa9.35□□□□□ -0.91
SLC6A1-201ENST00000287766 MP68P56378 58 aa9.35□□□□□ -0.91
SLC6A1-201ENST00000287766 FASNP49327 2511 aaKnown RBP9.35□□□□□ -0.91
SLC6A1-201ENST00000287766 PSCAO43653 123 aa9.35□□□□□ -0.91
SLC6A1-201ENST00000287766 RNASE3P12724 160 aaKnown RBP9.35□□□□□ -0.91
SLC6A1-201ENST00000287766 COX7CP15954 63 aa9.35□□□□□ -0.91
SLC6A1-201ENST00000287766 SERP2Q8N6R1 65 aa9.35□□□□□ -0.91
SLC6A1-201ENST00000287766 TRBV7-3A0A075B6L6 115 aa9.34□□□□□ -0.91
SLC6A1-201ENST00000287766 K7EMT4 169 aa9.34□□□□□ -0.91
SLC6A1-201ENST00000287766 SNURFQ9Y675 71 aa9.34□□□□□ -0.91
SLC6A1-201ENST00000287766 IGHV3-30P01768 117 aa9.34□□□□□ -0.91
SLC6A1-201ENST00000287766 IGHV3-30-5P0DP03 117 aa9.34□□□□□ -0.91
SLC6A1-201ENST00000287766 SHISA2Q6UWI4 295 aa9.34□□□□□ -0.91
SLC6A1-201ENST00000287766 MRPL55Q7Z7F7 128 aaKnown RBP9.34□□□□□ -0.91
SLC6A1-201ENST00000287766 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
SLC6A1-201ENST00000287766 J3QLI3 93 aa9.33□□□□□ -0.92
SLC6A1-201ENST00000287766 HHLA3Q9XRX5 114 aa9.33□□□□□ -0.92
SLC6A1-201ENST00000287766 SMIM9A6NGZ8 99 aa9.33□□□□□ -0.92
SLC6A1-201ENST00000287766 HIGD2BQ4VC39 106 aa9.33□□□□□ -0.92
SLC6A1-201ENST00000287766 FAM240AA0A1B0GVK7 77 aa9.32□□□□□ -0.92
SLC6A1-201ENST00000287766 CRIP2P52943 208 aaPredicted RBP9.32□□□□□ -0.92
SLC6A1-201ENST00000287766 KLK5Q9Y337 293 aaPredicted RBP9.32□□□□□ -0.92
SLC6A1-201ENST00000287766 UBE2BP63146 152 aa9.32□□□□□ -0.92
SLC6A1-201ENST00000287766 RPL18AQ02543 176 aaKnown RBP9.32□□□□□ -0.92
SLC6A1-201ENST00000287766 LINC00308Q8TCZ7 52 aa9.32□□□□□ -0.92
SLC6A1-201ENST00000287766 WDFY3Q8IZQ1 3526 aa9.32□□□□□ -0.92
SLC6A1-201ENST00000287766 IGLV4-3A0A075B6K6 122 aa9.31□□□□□ -0.92
SLC6A1-201ENST00000287766 TMEM223A0PJW6 202 aa9.31□□□□□ -0.92
SLC6A1-201ENST00000287766 CCL24O00175 119 aa9.31□□□□□ -0.92
SLC6A1-201ENST00000287766 GYPEP15421 78 aa9.31□□□□□ -0.92
SLC6A1-201ENST00000287766 IMUPQ9GZP8 106 aa9.31□□□□□ -0.92
SLC6A1-201ENST00000287766 MED14OSP0DP75 135 aa9.31□□□□□ -0.92
SLC6A1-201ENST00000287766 C18orf65Q6ZTR6 163 aa9.31□□□□□ -0.92
SLC6A1-201ENST00000287766 K7EQD1 137 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms