RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 IFI27P40305 119 aaPredicted RBP5.62□□□□□ -1.51
TRIM42-201ENST00000286349 RNF185Q96GF1 192 aa5.62□□□□□ -1.51
TRIM42-201ENST00000286349 C11orf21Q9P2W6 132 aa5.62□□□□□ -1.51
TRIM42-201ENST00000286349 MYMXA0A1B0GTQ4 84 aa5.62□□□□□ -1.51
TRIM42-201ENST00000286349 NPYP01303 97 aa5.62□□□□□ -1.51
TRIM42-201ENST00000286349 DAZ2Q13117 558 aaKnown RBP5.62□□□□□ -1.51
TRIM42-201ENST00000286349 DAZ4Q86SG3 579 aaKnown RBP5.62□□□□□ -1.51
TRIM42-201ENST00000286349 Q8N1Y9 231 aa5.62□□□□□ -1.51
TRIM42-201ENST00000286349 DAZ3Q9NR90 486 aaKnown RBP5.62□□□□□ -1.51
TRIM42-201ENST00000286349 KLLNB2CW77 178 aa5.61□□□□□ -1.51
TRIM42-201ENST00000286349 HBDP02042 147 aa5.61□□□□□ -1.51
TRIM42-201ENST00000286349 S100A4P26447 101 aaKnown RBP5.61□□□□□ -1.51
TRIM42-201ENST00000286349 UPK3BQ9BT76 320 aa5.61□□□□□ -1.51
TRIM42-201ENST00000286349 HIST1H4AP62805 103 aaKnown RBP5.6□□□□□ -1.51
TRIM42-201ENST00000286349 C4orf3Q8WVX3 66 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 IGKV3-7A0A075B6H7 116 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 IGHV4OR15-8A0A075B7B6 117 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 A0A087WW49 117 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 LOC389332A0A1B0GUA5 103 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 K7EQG2 157 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 SPRY2O43597 315 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 SLC25A20O43772 301 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 PPP1R17O96001 155 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 ACYP1P07311 99 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 RNASE4P34096 147 aaKnown RBP5.6□□□□□ -1.51
TRIM42-201ENST00000286349 SYNJ2BPP57105 145 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 ZNF56Q15929 161 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 TMEM170BQ5T4T1 132 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 PRR9Q5T870 116 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 C10orf99Q6UWK7 81 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 MSRB1Q9NZV6 116 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 PHLDA3Q9Y5J5 127 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 FBN1P35555 2871 aaKnown RBP5.6□□□□□ -1.51
TRIM42-201ENST00000286349 JMJD1CQ15652 2540 aa5.6□□□□□ -1.51
TRIM42-201ENST00000286349 KNCNA6PVL3 124 aa5.59□□□□□ -1.51
TRIM42-201ENST00000286349 H3BVH4 76 aa5.59□□□□□ -1.51
TRIM42-201ENST00000286349 APOC4P55056 127 aa5.59□□□□□ -1.51
TRIM42-201ENST00000286349 SRSF9Q13242 221 aaKnown RBP eCLIP5.59□□□□□ -1.51
TRIM42-201ENST00000286349 CEMP1Q6PRD7 247 aaPredicted RBP5.59□□□□□ -1.51
TRIM42-201ENST00000286349 TRBV25-1A0A075B6N4 114 aa5.59□□□□□ -1.51
TRIM42-201ENST00000286349 K7EMI3 77 aa5.59□□□□□ -1.51
TRIM42-201ENST00000286349 RNASE1P07998 156 aaKnown RBP5.59□□□□□ -1.51
TRIM42-201ENST00000286349 Q8N8P6 123 aa5.59□□□□□ -1.51
TRIM42-201ENST00000286349 TRBV7-6A0A0J9YX20 115 aa5.58□□□□□ -1.52
TRIM42-201ENST00000286349 A0A0J9YX75 114 aa5.58□□□□□ -1.52
TRIM42-201ENST00000286349 HERVK_113P61574 105 aa5.58□□□□□ -1.52
TRIM42-201ENST00000286349 SERP2Q8N6R1 65 aa5.58□□□□□ -1.52
TRIM42-201ENST00000286349 A0A096LNJ9 63 aa5.58□□□□□ -1.52
TRIM42-201ENST00000286349 F6UB75 175 aa5.58□□□□□ -1.52
TRIM42-201ENST00000286349 SMKR1H3BMG3 65 aa5.58□□□□□ -1.52
TRIM42-201ENST00000286349 M0R381 172 aa5.58□□□□□ -1.52
TRIM42-201ENST00000286349 PAX4O43316 350 aa5.58□□□□□ -1.52
TRIM42-201ENST00000286349 NXPH4O95158 308 aa5.58□□□□□ -1.52
TRIM42-201ENST00000286349 FCER1GP30273 86 aa5.58□□□□□ -1.52
TRIM42-201ENST00000286349 MRPS36P82909 103 aaKnown RBP5.58□□□□□ -1.52
TRIM42-201ENST00000286349 C5orf38Q86SI9 138 aa5.58□□□□□ -1.52
TRIM42-201ENST00000286349 DEFB121Q5J5C9 76 aa5.57□□□□□ -1.52
TRIM42-201ENST00000286349 WNK1Q9H4A3 2382 aa5.57□□□□□ -1.52
TRIM42-201ENST00000286349 Q6ZSV7 163 aa5.57□□□□□ -1.52
TRIM42-201ENST00000286349 LINC00643Q86TS7 51 aa5.57□□□□□ -1.52
TRIM42-201ENST00000286349 PRR26Q8N8Z3 221 aa5.57□□□□□ -1.52
TRIM42-201ENST00000286349 IFI27L1Q96BM0 104 aa5.57□□□□□ -1.52
TRIM42-201ENST00000286349 CYSTM1Q9H1C7 97 aa5.57□□□□□ -1.52
TRIM42-201ENST00000286349 LAGE3Q14657 143 aa5.56□□□□□ -1.52
TRIM42-201ENST00000286349 FP248Q71RG6 208 aaPredicted RBP5.56□□□□□ -1.52
TRIM42-201ENST00000286349 NRACQ8N912 160 aa5.56□□□□□ -1.52
TRIM42-201ENST00000286349 IGLV2-18A0A075B6J9 118 aa5.56□□□□□ -1.52
TRIM42-201ENST00000286349 TRBV7-3A0A075B6L6 115 aa5.56□□□□□ -1.52
TRIM42-201ENST00000286349 LOC107984156A0A0G2JMH3 177 aa5.56□□□□□ -1.52
TRIM42-201ENST00000286349 LINC01549A6NIU2 74 aa5.56□□□□□ -1.52
TRIM42-201ENST00000286349 RNASE3P12724 160 aaKnown RBP5.56□□□□□ -1.52
TRIM42-201ENST00000286349 ORMDL2Q53FV1 153 aa5.56□□□□□ -1.52
TRIM42-201ENST00000286349 ARL17AQ8IVW1 177 aa5.56□□□□□ -1.52
TRIM42-201ENST00000286349 NTN5Q8WTR8 489 aaPredicted RBP5.56□□□□□ -1.52
TRIM42-201ENST00000286349 RBM12B-AS1Q9P1G2 102 aa5.56□□□□□ -1.52
TRIM42-201ENST00000286349 H3BMM0 161 aa5.55□□□□□ -1.52
TRIM42-201ENST00000286349 DEFB1P60022 68 aa5.55□□□□□ -1.52
TRIM42-201ENST00000286349 RPL18AQ02543 176 aaKnown RBP5.55□□□□□ -1.52
TRIM42-201ENST00000286349 UBE2WQ96B02 151 aa5.55□□□□□ -1.52
TRIM42-201ENST00000286349 GNRH2O43555 120 aa5.55□□□□□ -1.52
TRIM42-201ENST00000286349 SLURP1P55000 103 aa5.55□□□□□ -1.52
TRIM42-201ENST00000286349 BEAN1Q3B7T3 259 aa5.55□□□□□ -1.52
TRIM42-201ENST00000286349 KRTAP24-1Q3LI83 254 aa5.55□□□□□ -1.52
TRIM42-201ENST00000286349 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.55□□□□□ -1.52
TRIM42-201ENST00000286349 KLHL30-AS1Q8NEE0 82 aa5.55□□□□□ -1.52
TRIM42-201ENST00000286349 LINC01006Q8NI28 216 aa5.55□□□□□ -1.52
TRIM42-201ENST00000286349 DYNLRB2Q8TF09 96 aa5.55□□□□□ -1.52
TRIM42-201ENST00000286349 SMIM2Q9BVW6 85 aa5.55□□□□□ -1.52
TRIM42-201ENST00000286349 IGHV1OR15-1A0A075B7D0 117 aa5.54□□□□□ -1.52
TRIM42-201ENST00000286349 TRAV12-3A0A0B4J271 114 aa5.54□□□□□ -1.52
TRIM42-201ENST00000286349 PLAC8L1A1L4L8 177 aa5.54□□□□□ -1.52
TRIM42-201ENST00000286349 A8MTW9 85 aa5.54□□□□□ -1.52
TRIM42-201ENST00000286349 SUMO2P61956 95 aaKnown RBP5.54□□□□□ -1.52
TRIM42-201ENST00000286349 HIST1H4GQ99525 98 aa5.54□□□□□ -1.52
TRIM42-201ENST00000286349 DKK2Q9UBU2 259 aa5.54□□□□□ -1.52
TRIM42-201ENST00000286349 KRTAP10-3P60369 221 aa5.54□□□□□ -1.52
TRIM42-201ENST00000286349 ZFP2Q6ZN57 461 aa5.54□□□□□ -1.52
TRIM42-201ENST00000286349 C14orf178Q8N769 122 aaPredicted RBP5.54□□□□□ -1.52
TRIM42-201ENST00000286349 TENM1Q9UKZ4 2725 aa5.54□□□□□ -1.52
TRIM42-201ENST00000286349 C2CD3Q4AC94 2353 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms