RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 SMCPP49901 116 aaPredicted RBP7.9□□□□□ -1.14
MSH3-201ENST00000265081 CMYA5Q8N3K9 4069 aa7.9□□□□□ -1.14
MSH3-201ENST00000265081 F5H768 121 aa7.9□□□□□ -1.14
MSH3-201ENST00000265081 LINC00242Q5T6M2 205 aa7.9□□□□□ -1.14
MSH3-201ENST00000265081 PRO1854Q9UHT4 67 aa7.9□□□□□ -1.14
MSH3-201ENST00000265081 H3BMG7 143 aa7.9□□□□□ -1.15
MSH3-201ENST00000265081 IGHV3-33P01772 117 aa7.9□□□□□ -1.15
MSH3-201ENST00000265081 RPL24P83731 157 aaKnown RBP7.9□□□□□ -1.15
MSH3-201ENST00000265081 CDC42SE2Q9NRR3 84 aa7.9□□□□□ -1.15
MSH3-201ENST00000265081 FAM208BQ5VWN6 2430 aa7.9□□□□□ -1.15
MSH3-201ENST00000265081 CREBBPQ92793 2442 aa7.9□□□□□ -1.15
MSH3-201ENST00000265081 RPL36AP83881 106 aaKnown RBP7.89□□□□□ -1.15
MSH3-201ENST00000265081 KIR2DL5BQ8NHK3 375 aa7.89□□□□□ -1.15
MSH3-201ENST00000265081 RPL36ALQ969Q0 106 aaKnown RBP7.89□□□□□ -1.15
MSH3-201ENST00000265081 MIAQ16674 131 aa7.89□□□□□ -1.15
MSH3-201ENST00000265081 MUSTN1Q8IVN3 82 aa7.89□□□□□ -1.15
MSH3-201ENST00000265081 WFDC10AQ9H1F0 79 aa7.89□□□□□ -1.15
MSH3-201ENST00000265081 TRBV20-1A0A075B6N2 111 aa7.89□□□□□ -1.15
MSH3-201ENST00000265081 IGHV3-38A0A0C4DH36 116 aa7.89□□□□□ -1.15
MSH3-201ENST00000265081 HERVK_113P63121 156 aa7.89□□□□□ -1.15
MSH3-201ENST00000265081 COX6A2Q02221 97 aa7.89□□□□□ -1.15
MSH3-201ENST00000265081 TRAV8-3A0A0A6YYJ7 113 aa7.88□□□□□ -1.15
MSH3-201ENST00000265081 A4D1N5 150 aa7.88□□□□□ -1.15
MSH3-201ENST00000265081 TMEM101Q96IK0 257 aa7.88□□□□□ -1.15
MSH3-201ENST00000265081 DNAH3Q8TD57 4116 aa7.88□□□□□ -1.15
MSH3-201ENST00000265081 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.88□□□□□ -1.15
MSH3-201ENST00000265081 FHL2Q14192 279 aa7.88□□□□□ -1.15
MSH3-201ENST00000265081 WFDC2Q14508 124 aa7.88□□□□□ -1.15
MSH3-201ENST00000265081 GAGE13Q4V321 117 aa7.88□□□□□ -1.15
MSH3-201ENST00000265081 ADAMTSL4-AS1Q5T5F5 129 aa7.88□□□□□ -1.15
MSH3-201ENST00000265081 NOP10Q9NPE3 64 aaKnown RBP7.88□□□□□ -1.15
MSH3-201ENST00000265081 NF1P21359 2839 aa7.88□□□□□ -1.15
MSH3-201ENST00000265081 TEX48A0A1B0GUV7 120 aa7.88□□□□□ -1.15
MSH3-201ENST00000265081 LYRM7Q5U5X0 104 aa7.88□□□□□ -1.15
MSH3-201ENST00000265081 CDKN2A-AS1Q9UH64 79 aa7.88□□□□□ -1.15
MSH3-201ENST00000265081 SMAGPQ0VAQ4 97 aa7.87□□□□□ -1.15
MSH3-201ENST00000265081 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
MSH3-201ENST00000265081 SMIM1B2RUZ4 78 aa7.87□□□□□ -1.15
MSH3-201ENST00000265081 RNASE13Q5GAN3 156 aaKnown RBP7.87□□□□□ -1.15
MSH3-201ENST00000265081 LY6G6DO95868 133 aa7.87□□□□□ -1.15
MSH3-201ENST00000265081 ZNF625Q96I27 306 aaPredicted RBP7.87□□□□□ -1.15
MSH3-201ENST00000265081 IFITM1P13164 125 aa7.86□□□□□ -1.15
MSH3-201ENST00000265081 INSL3P51460 131 aa7.86□□□□□ -1.15
MSH3-201ENST00000265081 TRBV30A0A0K0K1B3 111 aa7.86□□□□□ -1.15
MSH3-201ENST00000265081 TCL1BO95988 128 aa7.86□□□□□ -1.15
MSH3-201ENST00000265081 SPINK8P0C7L1 97 aa7.86□□□□□ -1.15
MSH3-201ENST00000265081 OTOGQ6ZRI0 2925 aa7.85□□□□□ -1.15
MSH3-201ENST00000265081 WIPF1O43516 503 aa7.85□□□□□ -1.15
MSH3-201ENST00000265081 SPATA25Q9BR10 227 aa7.85□□□□□ -1.15
MSH3-201ENST00000265081 X6R8D5 127 aa7.85□□□□□ -1.15
MSH3-201ENST00000265081 IGHV3-64A0A075B6Q5 118 aa7.85□□□□□ -1.15
MSH3-201ENST00000265081 SMR3AQ99954 134 aa7.85□□□□□ -1.15
MSH3-201ENST00000265081 NIPBLQ6KC79 2804 aaeCLIP7.84□□□□□ -1.15
MSH3-201ENST00000265081 SMIM9A6NGZ8 99 aa7.84□□□□□ -1.15
MSH3-201ENST00000265081 EPG5Q9HCE0 2579 aa7.84□□□□□ -1.15
MSH3-201ENST00000265081 APOMO95445 188 aa7.84□□□□□ -1.15
MSH3-201ENST00000265081 SORL1Q92673 2214 aa7.83□□□□□ -1.16
MSH3-201ENST00000265081 A8MZ25 164 aa7.83□□□□□ -1.16
MSH3-201ENST00000265081 UNC79Q9P2D8 2635 aa7.83□□□□□ -1.16
MSH3-201ENST00000265081 TMEM243Q9BU79 118 aa7.83□□□□□ -1.16
MSH3-201ENST00000265081 GEMIN7Q9H840 131 aaKnown RBP7.83□□□□□ -1.16
MSH3-201ENST00000265081 RPL35AP18077 110 aaKnown RBP7.82□□□□□ -1.16
MSH3-201ENST00000265081 RNF151Q2KHN1 245 aa7.82□□□□□ -1.16
MSH3-201ENST00000265081 ITPR2Q14571 2701 aa7.82□□□□□ -1.16
MSH3-201ENST00000265081 TRBV6-8A0A0A6YYG3 113 aa7.82□□□□□ -1.16
MSH3-201ENST00000265081 GAGE12JA6NER3 117 aa7.82□□□□□ -1.16
MSH3-201ENST00000265081 GAGE4Q13068 117 aa7.82□□□□□ -1.16
MSH3-201ENST00000265081 GAGE5Q13069 117 aa7.82□□□□□ -1.16
MSH3-201ENST00000265081 CITED1Q99966 193 aa7.82□□□□□ -1.16
MSH3-201ENST00000265081 LOC100131303A0A0U1RQF7 123 aa7.81□□□□□ -1.16
MSH3-201ENST00000265081 GAGE7O76087 117 aa7.81□□□□□ -1.16
MSH3-201ENST00000265081 GAGE12FP0CL80 117 aa7.81□□□□□ -1.16
MSH3-201ENST00000265081 GAGE12GP0CL81 117 aa7.81□□□□□ -1.16
MSH3-201ENST00000265081 GAGE12IP0CL82 117 aa7.81□□□□□ -1.16
MSH3-201ENST00000265081 ERG28Q9UKR5 140 aa7.81□□□□□ -1.16
MSH3-201ENST00000265081 SH2D6Q7Z4S9 175 aa7.81□□□□□ -1.16
MSH3-201ENST00000265081 VPS25Q9BRG1 176 aa7.81□□□□□ -1.16
MSH3-201ENST00000265081 PCP4P48539 62 aa7.8□□□□□ -1.16
MSH3-201ENST00000265081 HERV-K104P63124 156 aa7.8□□□□□ -1.16
MSH3-201ENST00000265081 FOXI1Q12951 378 aa7.8□□□□□ -1.16
MSH3-201ENST00000265081 PSMB2P49721 201 aa7.8□□□□□ -1.16
MSH3-201ENST00000265081 C9orf66Q5T8R8 295 aa7.8□□□□□ -1.16
MSH3-201ENST00000265081 ETDBQ3ZM63 59 aa7.8□□□□□ -1.16
MSH3-201ENST00000265081 SPATA3Q8NHX4 192 aa7.8□□□□□ -1.16
MSH3-201ENST00000265081 CARD19Q96LW7 228 aa7.79□□□□□ -1.16
MSH3-201ENST00000265081 TEN1Q86WV5 123 aa7.79□□□□□ -1.16
MSH3-201ENST00000265081 LINC01561Q8N1V8 128 aa7.79□□□□□ -1.16
MSH3-201ENST00000265081 TRGV2A0A075B6R0 118 aa7.79□□□□□ -1.16
MSH3-201ENST00000265081 A0A1B0GUV1 79 aa7.79□□□□□ -1.16
MSH3-201ENST00000265081 TRIAP1O43715 76 aa7.79□□□□□ -1.16
MSH3-201ENST00000265081 LINC00308Q8TCZ7 52 aa7.79□□□□□ -1.16
MSH3-201ENST00000265081 IGHV3OR16-9A0A0B4J2B5 98 aa7.78□□□□□ -1.16
MSH3-201ENST00000265081 DGAT2L7PQ6IED9 249 aa7.78□□□□□ -1.16
MSH3-201ENST00000265081 LOC107984156A0A0G2JMH3 177 aa7.78□□□□□ -1.16
MSH3-201ENST00000265081 LYRM9A8MSI8 78 aa7.78□□□□□ -1.16
MSH3-201ENST00000265081 ARL17AQ8IVW1 177 aa7.78□□□□□ -1.16
MSH3-201ENST00000265081 ICOSQ9Y6W8 199 aa7.78□□□□□ -1.16
MSH3-201ENST00000265081 SOSTDC1Q6X4U4 206 aa7.78□□□□□ -1.16
MSH3-201ENST00000265081 SCGB1A1P11684 91 aa7.77□□□□□ -1.17
MSH3-201ENST00000265081 SHISA2Q6UWI4 295 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms