RNA–Protein interactions for RNA: ENST00000260795.6

FGFR3-201, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR3, Length 4,132 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-201ENST00000260795 LINC01006Q8NI28 216 aa10.65□□□□□ -0.7
FGFR3-201ENST00000260795 GCN1Q92616 2671 aaKnown RBP10.64□□□□□ -0.71
FGFR3-201ENST00000260795 IGLV4-3A0A075B6K6 122 aa10.64□□□□□ -0.71
FGFR3-201ENST00000260795 POLR2KP53803 58 aaKnown RBP10.64□□□□□ -0.71
FGFR3-201ENST00000260795 SPANXA1Q9NS26 97 aa10.64□□□□□ -0.71
FGFR3-201ENST00000260795 C4orf3Q8WVX3 66 aa10.64□□□□□ -0.71
FGFR3-201ENST00000260795 IGHV4-4A0A075B6R2 117 aa10.64□□□□□ -0.71
FGFR3-201ENST00000260795 A0A0J9YXY3 114 aa10.64□□□□□ -0.71
FGFR3-201ENST00000260795 IGLV2-18A0A075B6J9 118 aa10.63□□□□□ -0.71
FGFR3-201ENST00000260795 TRBV7-3A0A075B6L6 115 aa10.63□□□□□ -0.71
FGFR3-201ENST00000260795 CRLF1O75462 422 aa10.63□□□□□ -0.71
FGFR3-201ENST00000260795 DCANP1Q8TF63 244 aa10.63□□□□□ -0.71
FGFR3-201ENST00000260795 CDKN2A-AS1Q9UH64 79 aa10.63□□□□□ -0.71
FGFR3-201ENST00000260795 DEFB114Q30KQ6 69 aa10.63□□□□□ -0.71
FGFR3-201ENST00000260795 COX8CQ7Z4L0 72 aa10.63□□□□□ -0.71
FGFR3-201ENST00000260795 LRRC75A-AS1Q8N1F1 130 aa10.63□□□□□ -0.71
FGFR3-201ENST00000260795 KLLNB2CW77 178 aa10.63□□□□□ -0.71
FGFR3-201ENST00000260795 ICOSQ9Y6W8 199 aa10.63□□□□□ -0.71
FGFR3-201ENST00000260795 CRYGDP07320 174 aa10.62□□□□□ -0.71
FGFR3-201ENST00000260795 IGLV10-54A0A075B6I4 117 aa10.62□□□□□ -0.71
FGFR3-201ENST00000260795 MT-ATP8P03928 68 aa10.62□□□□□ -0.71
FGFR3-201ENST00000260795 XCL1P47992 114 aa10.62□□□□□ -0.71
FGFR3-201ENST00000260795 IGHV1-58A0A0C4DH39 117 aa10.62□□□□□ -0.71
FGFR3-201ENST00000260795 TRBV27A0A0K0K1C4 114 aa10.62□□□□□ -0.71
FGFR3-201ENST00000260795 LINC00467Q9BRT7 94 aa10.62□□□□□ -0.71
FGFR3-201ENST00000260795 S100A7L2Q5SY68 101 aa10.61□□□□□ -0.71
FGFR3-201ENST00000260795 B5MCH6 92 aa10.61□□□□□ -0.71
FGFR3-201ENST00000260795 ZMAT4Q9H898 229 aa10.61□□□□□ -0.71
FGFR3-201ENST00000260795 Q6ZTI0 123 aa10.61□□□□□ -0.71
FGFR3-201ENST00000260795 NFE4Q86UQ8 179 aa10.61□□□□□ -0.71
FGFR3-201ENST00000260795 LGALS9O00182 355 aa10.6□□□□□ -0.71
FGFR3-201ENST00000260795 PSMG3-AS1Q96PY0 264 aa10.6□□□□□ -0.71
FGFR3-201ENST00000260795 VSIG2Q96IQ7 327 aa10.6□□□□□ -0.71
FGFR3-201ENST00000260795 ANGP03950 147 aaKnown RBP10.6□□□□□ -0.71
FGFR3-201ENST00000260795 HIST1H4AP62805 103 aaKnown RBP10.6□□□□□ -0.71
FGFR3-201ENST00000260795 ZNF580Q9UK33 172 aa10.6□□□□□ -0.71
FGFR3-201ENST00000260795 ITPR1Q14643 2758 aa10.59□□□□□ -0.71
FGFR3-201ENST00000260795 TEX49A0A1B0GTD5 131 aa10.59□□□□□ -0.71
FGFR3-201ENST00000260795 IGIPA6NJ69 53 aa10.59□□□□□ -0.71
FGFR3-201ENST00000260795 IGLV1-40P01703 118 aa10.59□□□□□ -0.71
FGFR3-201ENST00000260795 TMEM223A0PJW6 202 aa10.58□□□□□ -0.72
FGFR3-201ENST00000260795 TSHBP01222 138 aa10.58□□□□□ -0.72
FGFR3-201ENST00000260795 GYPEP15421 78 aa10.58□□□□□ -0.72
FGFR3-201ENST00000260795 SS18Q15532 418 aa10.58□□□□□ -0.72
FGFR3-201ENST00000260795 TSPEAR-AS2P59090 65 aa10.58□□□□□ -0.72
FGFR3-201ENST00000260795 STAB1Q9NY15 2570 aa10.58□□□□□ -0.72
FGFR3-201ENST00000260795 IGHV3-30P01768 117 aa10.57□□□□□ -0.72
FGFR3-201ENST00000260795 IGHV3-30-5P0DP03 117 aa10.57□□□□□ -0.72
FGFR3-201ENST00000260795 TINCRA0A1B0GVN0 87 aa10.57□□□□□ -0.72
FGFR3-201ENST00000260795 BAALC-AS2P0C853 105 aa10.57□□□□□ -0.72
FGFR3-201ENST00000260795 APOC4P55056 127 aa10.57□□□□□ -0.72
FGFR3-201ENST00000260795 UBR5O95071 2799 aaPredicted RBP10.57□□□□□ -0.72
FGFR3-201ENST00000260795 TRAV26-1A0A087WT03 109 aa10.57□□□□□ -0.72
FGFR3-201ENST00000260795 IFITM1P13164 125 aa10.57□□□□□ -0.72
FGFR3-201ENST00000260795 IGHV3-33P01772 117 aa10.56□□□□□ -0.72
FGFR3-201ENST00000260795 CRYBA4P53673 196 aa10.56□□□□□ -0.72
FGFR3-201ENST00000260795 TMEM89A2RUT3 159 aa10.56□□□□□ -0.72
FGFR3-201ENST00000260795 K7EQD1 137 aa10.56□□□□□ -0.72
FGFR3-201ENST00000260795 PRB2P02812 416 aaPredicted RBP10.56□□□□□ -0.72
FGFR3-201ENST00000260795 C9orf66Q5T8R8 295 aa10.56□□□□□ -0.72
FGFR3-201ENST00000260795 LAMA5O15230 3695 aa10.55□□□□□ -0.72
FGFR3-201ENST00000260795 SS18L2Q9UHA2 77 aa10.55□□□□□ -0.72
FGFR3-201ENST00000260795 TRBV6-5A0A0K0K1A5 114 aa10.54□□□□□ -0.72
FGFR3-201ENST00000260795 SOCS3O14543 225 aa10.54□□□□□ -0.72
FGFR3-201ENST00000260795 TRIAP1O43715 76 aa10.54□□□□□ -0.72
FGFR3-201ENST00000260795 CFAP126Q5VTH2 177 aa10.54□□□□□ -0.72
FGFR3-201ENST00000260795 DNAJC30Q96LL9 226 aa10.54□□□□□ -0.72
FGFR3-201ENST00000260795 SND1-IT1Q9HBX3 110 aa10.54□□□□□ -0.72
FGFR3-201ENST00000260795 IGLV4-69A0A075B6H9 119 aa10.54□□□□□ -0.72
FGFR3-201ENST00000260795 UBE2DNLQ8IWF7 75 aa10.54□□□□□ -0.72
FGFR3-201ENST00000260795 C9orf85Q96MD7 179 aa10.54□□□□□ -0.72
FGFR3-201ENST00000260795 Q9HAA7 133 aa10.54□□□□□ -0.72
FGFR3-201ENST00000260795 LAMTOR3Q9UHA4 124 aa10.54□□□□□ -0.72
FGFR3-201ENST00000260795 TRBV10-2A0A0K0K1G8 114 aa10.53□□□□□ -0.72
FGFR3-201ENST00000260795 EDA2RQ9HAV5 297 aa10.53□□□□□ -0.72
FGFR3-201ENST00000260795 FAM110AQ9BQ89 295 aa10.53□□□□□ -0.72
FGFR3-201ENST00000260795 MIAQ16674 131 aa10.52□□□□□ -0.72
FGFR3-201ENST00000260795 MIR7-3HGQ8N6C7 128 aa10.52□□□□□ -0.72
FGFR3-201ENST00000260795 ODF3Q96PU9 254 aa10.52□□□□□ -0.72
FGFR3-201ENST00000260795 NDUFA7O95182 113 aa10.52□□□□□ -0.73
FGFR3-201ENST00000260795 PIK3CD-AS1Q5SR53 167 aa10.52□□□□□ -0.73
FGFR3-201ENST00000260795 COL6A5A8TX70 2615 aa10.52□□□□□ -0.73
FGFR3-201ENST00000260795 UNC79Q9P2D8 2635 aa10.51□□□□□ -0.73
FGFR3-201ENST00000260795 NBEAL1Q6ZS30 2694 aa10.51□□□□□ -0.73
FGFR3-201ENST00000260795 NOTCH1P46531 2555 aa10.51□□□□□ -0.73
FGFR3-201ENST00000260795 CRIP2P52943 208 aaPredicted RBP10.51□□□□□ -0.73
FGFR3-201ENST00000260795 DAZ2Q13117 558 aaKnown RBP10.51□□□□□ -0.73
FGFR3-201ENST00000260795 DAZ4Q86SG3 579 aaKnown RBP10.51□□□□□ -0.73
FGFR3-201ENST00000260795 DAZ3Q9NR90 486 aaKnown RBP10.51□□□□□ -0.73
FGFR3-201ENST00000260795 TRAV13-2A0A0B4J235 113 aa10.51□□□□□ -0.73
FGFR3-201ENST00000260795 RNF183Q96D59 192 aa10.5□□□□□ -0.73
FGFR3-201ENST00000260795 A0A0B4J2C4 111 aa10.5□□□□□ -0.73
FGFR3-201ENST00000260795 INAFM2P0DMQ5 153 aa10.5□□□□□ -0.73
FGFR3-201ENST00000260795 ATP6V0E2Q8NHE4 81 aa10.5□□□□□ -0.73
FGFR3-201ENST00000260795 TRAV4A0A0B4J268 109 aa10.49□□□□□ -0.73
FGFR3-201ENST00000260795 UBE2D1P51668 147 aa10.49□□□□□ -0.73
FGFR3-201ENST00000260795 XGP55808 180 aa10.49□□□□□ -0.73
FGFR3-201ENST00000260795 OXLD1Q5BKU9 147 aa10.49□□□□□ -0.73
FGFR3-201ENST00000260795 RNF152Q8N8N0 203 aa10.49□□□□□ -0.73
FGFR3-201ENST00000260795 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms