RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ANKRD29Q8N6D5 301 aa10.63□□□□□ -0.71
TRAFD1-201ENST00000257604 COL6A5A8TX70 2615 aa10.63□□□□□ -0.71
TRAFD1-201ENST00000257604 PPP1R17O96001 155 aa10.63□□□□□ -0.71
TRAFD1-201ENST00000257604 POLR2KP53803 58 aaKnown RBP10.63□□□□□ -0.71
TRAFD1-201ENST00000257604 Q6ZUT4 128 aa10.63□□□□□ -0.71
TRAFD1-201ENST00000257604 ZNRF2Q8NHG8 242 aa10.63□□□□□ -0.71
TRAFD1-201ENST00000257604 M0R2P5 195 aa10.63□□□□□ -0.71
TRAFD1-201ENST00000257604 GAGE7O76087 117 aa10.63□□□□□ -0.71
TRAFD1-201ENST00000257604 GAGE12FP0CL80 117 aa10.63□□□□□ -0.71
TRAFD1-201ENST00000257604 GAGE12GP0CL81 117 aa10.63□□□□□ -0.71
TRAFD1-201ENST00000257604 GAGE12IP0CL82 117 aa10.63□□□□□ -0.71
TRAFD1-201ENST00000257604 RPL32P62910 135 aaKnown RBP10.63□□□□□ -0.71
TRAFD1-201ENST00000257604 TRGV2A0A075B6R0 118 aa10.62□□□□□ -0.71
TRAFD1-201ENST00000257604 IGKV3OR2-268A0A0C4DH90 116 aa10.62□□□□□ -0.71
TRAFD1-201ENST00000257604 A8MZ25 164 aa10.62□□□□□ -0.71
TRAFD1-201ENST00000257604 DEFB4AO15263 64 aa10.61□□□□□ -0.71
TRAFD1-201ENST00000257604 UBE2D3P61077 147 aa10.61□□□□□ -0.71
TRAFD1-201ENST00000257604 UBE2D2P62837 147 aa10.61□□□□□ -0.71
TRAFD1-201ENST00000257604 ODF3Q96PU9 254 aa10.61□□□□□ -0.71
TRAFD1-201ENST00000257604 A4D1N5 150 aa10.61□□□□□ -0.71
TRAFD1-201ENST00000257604 KRTAP10-3P60369 221 aa10.61□□□□□ -0.71
TRAFD1-201ENST00000257604 HERVK_113P61574 105 aa10.61□□□□□ -0.71
TRAFD1-201ENST00000257604 C1orf158Q8N1D5 194 aa10.61□□□□□ -0.71
TRAFD1-201ENST00000257604 LINC00482Q8N8I6 264 aa10.61□□□□□ -0.71
TRAFD1-201ENST00000257604 DEFB130BP0DP73 79 aa10.61□□□□□ -0.71
TRAFD1-201ENST00000257604 DEFB130AP0DP74 79 aa10.61□□□□□ -0.71
TRAFD1-201ENST00000257604 GAGE5Q13069 117 aa10.61□□□□□ -0.71
TRAFD1-201ENST00000257604 GAGE6Q13070 117 aa10.61□□□□□ -0.71
TRAFD1-201ENST00000257604 PMVKQ15126 192 aa10.61□□□□□ -0.71
TRAFD1-201ENST00000257604 NXPH4O95158 308 aa10.6□□□□□ -0.71
TRAFD1-201ENST00000257604 IGHV3-30P01768 117 aa10.6□□□□□ -0.71
TRAFD1-201ENST00000257604 IGHV3-30-5P0DP03 117 aa10.6□□□□□ -0.71
TRAFD1-201ENST00000257604 IGIPA6NJ69 53 aa10.6□□□□□ -0.71
TRAFD1-201ENST00000257604 A8MWV9 139 aa10.6□□□□□ -0.71
TRAFD1-201ENST00000257604 I3L3M4 83 aa10.6□□□□□ -0.71
TRAFD1-201ENST00000257604 LGALS3P17931 250 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-201ENST00000257604 TEN1Q86WV5 123 aa10.6□□□□□ -0.71
TRAFD1-201ENST00000257604 PPDPFLQ8WWR9 84 aa10.6□□□□□ -0.71
TRAFD1-201ENST00000257604 SPXQ9BT56 116 aa10.6□□□□□ -0.71
TRAFD1-201ENST00000257604 GAGE12JA6NER3 117 aa10.59□□□□□ -0.71
TRAFD1-201ENST00000257604 GAGE4Q13068 117 aa10.59□□□□□ -0.71
TRAFD1-201ENST00000257604 A0A0J9YXV3 536 aa10.59□□□□□ -0.71
TRAFD1-201ENST00000257604 VCX2Q9H322 139 aa10.59□□□□□ -0.71
TRAFD1-201ENST00000257604 J3QQQ9 107 aa10.59□□□□□ -0.71
TRAFD1-201ENST00000257604 DGAT2L7PQ6IED9 249 aa10.59□□□□□ -0.71
TRAFD1-201ENST00000257604 CCDC179H3BU77 68 aa10.58□□□□□ -0.72
TRAFD1-201ENST00000257604 C10orf126Q8N4M7 172 aa10.58□□□□□ -0.72
TRAFD1-201ENST00000257604 PRO1854Q9UHT4 67 aa10.58□□□□□ -0.72
TRAFD1-201ENST00000257604 ZNF625Q96I27 306 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-201ENST00000257604 TRAV8-3A0A0A6YYJ7 113 aa10.57□□□□□ -0.72
TRAFD1-201ENST00000257604 DAND5Q8N907 189 aa10.57□□□□□ -0.72
TRAFD1-201ENST00000257604 FBN1P35555 2871 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-201ENST00000257604 EIF4EBP3O60516 100 aaPredicted RBP10.57□□□□□ -0.72
TRAFD1-201ENST00000257604 MUSTN1Q8IVN3 82 aa10.57□□□□□ -0.72
TRAFD1-201ENST00000257604 SLC25A29Q8N8R3 303 aa10.57□□□□□ -0.72
TRAFD1-201ENST00000257604 NTN5Q8WTR8 489 aaPredicted RBP10.57□□□□□ -0.72
TRAFD1-201ENST00000257604 TRBV27A0A0K0K1C4 114 aa10.57□□□□□ -0.72
TRAFD1-201ENST00000257604 POM121L12Q8N7R1 296 aa10.56□□□□□ -0.72
TRAFD1-201ENST00000257604 ATP6V0E2Q8NHE4 81 aa10.56□□□□□ -0.72
TRAFD1-201ENST00000257604 NBEAL1Q6ZS30 2694 aa10.56□□□□□ -0.72
TRAFD1-201ENST00000257604 A0A096LPF7 62 aa10.56□□□□□ -0.72
TRAFD1-201ENST00000257604 LOC100131303A0A0U1RQF7 123 aa10.56□□□□□ -0.72
TRAFD1-201ENST00000257604 SLC25A20O43772 301 aa10.56□□□□□ -0.72
TRAFD1-201ENST00000257604 CRLF1O75462 422 aa10.56□□□□□ -0.72
TRAFD1-201ENST00000257604 MRPL23Q16540 153 aaKnown RBP10.56□□□□□ -0.72
TRAFD1-201ENST00000257604 M0QXV9 152 aa10.55□□□□□ -0.72
TRAFD1-201ENST00000257604 C11orf72Q8NBR9 251 aa10.55□□□□□ -0.72
TRAFD1-201ENST00000257604 TEX49A0A1B0GTD5 131 aa10.55□□□□□ -0.72
TRAFD1-201ENST00000257604 PPDPFQ9H3Y8 114 aa10.55□□□□□ -0.72
TRAFD1-201ENST00000257604 NDUFA7O95182 113 aa10.55□□□□□ -0.72
TRAFD1-201ENST00000257604 C20orf203Q8NBC4 194 aa10.55□□□□□ -0.72
TRAFD1-201ENST00000257604 ERG28Q9UKR5 140 aa10.55□□□□□ -0.72
TRAFD1-201ENST00000257604 LYRM7Q5U5X0 104 aa10.54□□□□□ -0.72
TRAFD1-201ENST00000257604 AMELXQ99217 191 aa10.54□□□□□ -0.72
TRAFD1-201ENST00000257604 LINC00467Q9BRT7 94 aa10.53□□□□□ -0.72
TRAFD1-201ENST00000257604 PKD1L1Q8TDX9 2849 aa10.53□□□□□ -0.72
TRAFD1-201ENST00000257604 TRAV4A0A0B4J268 109 aa10.53□□□□□ -0.72
TRAFD1-201ENST00000257604 IGLV1-51P01701 117 aa10.53□□□□□ -0.72
TRAFD1-201ENST00000257604 TRAV13-1A0A0B4J241 112 aa10.52□□□□□ -0.73
TRAFD1-201ENST00000257604 TRGV4A0A0C4DH28 118 aa10.52□□□□□ -0.73
TRAFD1-201ENST00000257604 PAPPA-AS1Q5QFB9 102 aa10.52□□□□□ -0.73
TRAFD1-201ENST00000257604 BAHCC1Q9P281 2608 aa10.52□□□□□ -0.73
TRAFD1-201ENST00000257604 TRAV25A0A0B4J276 109 aa10.51□□□□□ -0.73
TRAFD1-201ENST00000257604 IGHV3-33P01772 117 aa10.51□□□□□ -0.73
TRAFD1-201ENST00000257604 TTC32Q5I0X7 151 aa10.51□□□□□ -0.73
TRAFD1-201ENST00000257604 ZFAND6Q6FIF0 208 aa10.51□□□□□ -0.73
TRAFD1-201ENST00000257604 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.51□□□□□ -0.73
TRAFD1-201ENST00000257604 CLEC2BQ92478 149 aa10.51□□□□□ -0.73
TRAFD1-201ENST00000257604 IGLV4-3A0A075B6K6 122 aa10.51□□□□□ -0.73
TRAFD1-201ENST00000257604 TMEM141Q96I45 108 aa10.51□□□□□ -0.73
TRAFD1-201ENST00000257604 C16orf95Q9H693 158 aa10.51□□□□□ -0.73
TRAFD1-201ENST00000257604 TIMM17AQ99595 171 aa10.5□□□□□ -0.73
TRAFD1-201ENST00000257604 TRBV6-5A0A0K0K1A5 114 aa10.5□□□□□ -0.73
TRAFD1-201ENST00000257604 GIG44P09565 113 aaPredicted RBP10.5□□□□□ -0.73
TRAFD1-201ENST00000257604 DEFB135Q30KP9 77 aa10.49□□□□□ -0.73
TRAFD1-201ENST00000257604 HTN3P15516 51 aa10.49□□□□□ -0.73
TRAFD1-201ENST00000257604 TMEM263Q8WUH6 116 aaKnown RBP10.49□□□□□ -0.73
TRAFD1-201ENST00000257604 ZNF22P17026 224 aaPredicted RBP10.49□□□□□ -0.73
TRAFD1-201ENST00000257604 TMEM223A0PJW6 202 aa10.48□□□□□ -0.73
TRAFD1-201ENST00000257604 LINC00694P0DN24 101 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms