RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 WFDC10AQ9H1F0 79 aa9.72□□□□□ -0.85
PRPF38A-201ENST00000257181 F8W1H4 67 aa9.71□□□□□ -0.85
PRPF38A-201ENST00000257181 CNFNQ9BYD5 112 aa9.71□□□□□ -0.85
PRPF38A-201ENST00000257181 BDP1A6H8Y1 2624 aa9.71□□□□□ -0.85
PRPF38A-201ENST00000257181 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.71□□□□□ -0.85
PRPF38A-201ENST00000257181 hADV29S1A0JD25 119 aa9.71□□□□□ -0.86
PRPF38A-201ENST00000257181 RNASE3P12724 160 aaKnown RBP9.71□□□□□ -0.86
PRPF38A-201ENST00000257181 CDPF1Q6NVV7 123 aa9.71□□□□□ -0.86
PRPF38A-201ENST00000257181 FAM229AH3BQW9 127 aa9.7□□□□□ -0.86
PRPF38A-201ENST00000257181 IGLV4-3A0A075B6K6 122 aa9.7□□□□□ -0.86
PRPF38A-201ENST00000257181 C9orf118A6NHY6 69 aa9.7□□□□□ -0.86
PRPF38A-201ENST00000257181 PPDPFLQ8WWR9 84 aa9.7□□□□□ -0.86
PRPF38A-201ENST00000257181 C6orf223Q8N319 242 aa9.7□□□□□ -0.86
PRPF38A-201ENST00000257181 UBE2D4Q9Y2X8 147 aa9.7□□□□□ -0.86
PRPF38A-201ENST00000257181 C1orf158Q8N1D5 194 aa9.69□□□□□ -0.86
PRPF38A-201ENST00000257181 BAALC-AS2P0C853 105 aa9.69□□□□□ -0.86
PRPF38A-201ENST00000257181 FHL2Q14192 279 aa9.69□□□□□ -0.86
PRPF38A-201ENST00000257181 NREPQ16612 68 aa9.69□□□□□ -0.86
PRPF38A-201ENST00000257181 HIGD2AQ9BW72 106 aa9.69□□□□□ -0.86
PRPF38A-201ENST00000257181 NAV2Q8IVL1 2488 aa9.69□□□□□ -0.86
PRPF38A-201ENST00000257181 NCOR2Q9Y618 2525 aa9.68□□□□□ -0.86
PRPF38A-201ENST00000257181 IGLV2-8P01709 118 aa9.68□□□□□ -0.86
PRPF38A-201ENST00000257181 EXPH5Q8NEV8 1989 aa9.68□□□□□ -0.86
PRPF38A-201ENST00000257181 MRPS12O15235 138 aaKnown RBP9.68□□□□□ -0.86
PRPF38A-201ENST00000257181 RETNQ9HD89 108 aa9.68□□□□□ -0.86
PRPF38A-201ENST00000257181 SPTAN1Q13813 2472 aaKnown RBP9.68□□□□□ -0.86
PRPF38A-201ENST00000257181 RAI1Q7Z5J4 1906 aaPredicted RBP9.68□□□□□ -0.86
PRPF38A-201ENST00000257181 NAV3Q8IVL0 2385 aa9.67□□□□□ -0.86
PRPF38A-201ENST00000257181 LINC01556Q5JQF7 62 aa9.67□□□□□ -0.86
PRPF38A-201ENST00000257181 FAM19A5Q7Z5A7 132 aaPredicted RBP9.67□□□□□ -0.86
PRPF38A-201ENST00000257181 MDFIQ99750 246 aa9.67□□□□□ -0.86
PRPF38A-201ENST00000257181 A0A1B0GX51 115 aa9.67□□□□□ -0.86
PRPF38A-201ENST00000257181 REG3GQ6UW15 175 aa9.67□□□□□ -0.86
PRPF38A-201ENST00000257181 MUSTN1Q8IVN3 82 aa9.67□□□□□ -0.86
PRPF38A-201ENST00000257181 A8MZ25 164 aa9.67□□□□□ -0.86
PRPF38A-201ENST00000257181 HAMPP81172 84 aa9.67□□□□□ -0.86
PRPF38A-201ENST00000257181 PLAC8L1A1L4L8 177 aa9.66□□□□□ -0.86
PRPF38A-201ENST00000257181 IGLV2-11P01706 119 aa9.66□□□□□ -0.86
PRPF38A-201ENST00000257181 MP68P56378 58 aa9.66□□□□□ -0.86
PRPF38A-201ENST00000257181 HIST2H2BDQ6DRA6 164 aa9.66□□□□□ -0.86
PRPF38A-201ENST00000257181 SMIM20Q8N5G0 67 aa9.66□□□□□ -0.86
PRPF38A-201ENST00000257181 LYPD5Q6UWN5 251 aa9.66□□□□□ -0.86
PRPF38A-201ENST00000257181 LINC00336Q6ZUF6 198 aa9.66□□□□□ -0.86
PRPF38A-201ENST00000257181 A0A1B0GV90 55 aa9.65□□□□□ -0.86
PRPF38A-201ENST00000257181 TSHBP01222 138 aa9.65□□□□□ -0.86
PRPF38A-201ENST00000257181 RBM3P98179 157 aaKnown RBP9.65□□□□□ -0.86
PRPF38A-201ENST00000257181 C12orf74Q32Q52 190 aa9.65□□□□□ -0.86
PRPF38A-201ENST00000257181 TMEM223A0PJW6 202 aa9.65□□□□□ -0.86
PRPF38A-201ENST00000257181 FREM1Q5H8C1 2179 aa9.65□□□□□ -0.87
PRPF38A-201ENST00000257181 ARFGEF3Q5TH69 2177 aa9.65□□□□□ -0.87
PRPF38A-201ENST00000257181 PYY3Q5JQD4 70 aa9.65□□□□□ -0.87
PRPF38A-201ENST00000257181 A0A0B4J2C4 111 aa9.64□□□□□ -0.87
PRPF38A-201ENST00000257181 PLA2G1BP04054 148 aaKnown RBP9.64□□□□□ -0.87
PRPF38A-201ENST00000257181 ABCA1O95477 2261 aa9.64□□□□□ -0.87
PRPF38A-201ENST00000257181 A0A1B0GV72 72 aa9.64□□□□□ -0.87
PRPF38A-201ENST00000257181 POLR2KP53803 58 aaKnown RBP9.64□□□□□ -0.87
PRPF38A-201ENST00000257181 TRAV23DV6A0A075B6W5 121 aa9.63□□□□□ -0.87
PRPF38A-201ENST00000257181 CDC42SE2Q9NRR3 84 aa9.63□□□□□ -0.87
PRPF38A-201ENST00000257181 TET2Q6N021 2002 aaPredicted RBP9.63□□□□□ -0.87
PRPF38A-201ENST00000257181 CACNA1AO00555 2505 aa9.63□□□□□ -0.87
PRPF38A-201ENST00000257181 H3BT86 120 aa9.62□□□□□ -0.87
PRPF38A-201ENST00000257181 NCOA6Q14686 2063 aaPredicted RBP9.62□□□□□ -0.87
PRPF38A-201ENST00000257181 LIMD2Q9BT23 127 aa9.62□□□□□ -0.87
PRPF38A-201ENST00000257181 LRCOL1A6NCL2 159 aa9.62□□□□□ -0.87
PRPF38A-201ENST00000257181 PRRC2AP48634 2157 aaKnown RBP9.61□□□□□ -0.87
PRPF38A-201ENST00000257181 SIGMAR1Q99720 223 aa9.61□□□□□ -0.87
PRPF38A-201ENST00000257181 UPK3BQ9BT76 320 aa9.61□□□□□ -0.87
PRPF38A-201ENST00000257181 USP17L23D6RBM5 183 aa9.61□□□□□ -0.87
PRPF38A-201ENST00000257181 DOCK11Q5JSL3 2073 aa9.61□□□□□ -0.87
PRPF38A-201ENST00000257181 ZNF22P17026 224 aaPredicted RBP9.61□□□□□ -0.87
PRPF38A-201ENST00000257181 Q6JHZ5 121 aa9.6□□□□□ -0.87
PRPF38A-201ENST00000257181 A0A096LNT2 108 aa9.59□□□□□ -0.87
PRPF38A-201ENST00000257181 RNF185Q96GF1 192 aa9.59□□□□□ -0.87
PRPF38A-201ENST00000257181 CDKN2A-AS1Q9UH64 79 aa9.59□□□□□ -0.87
PRPF38A-201ENST00000257181 PRYO14603 147 aa9.59□□□□□ -0.87
PRPF38A-201ENST00000257181 NUPR1O60356 82 aa9.59□□□□□ -0.87
PRPF38A-201ENST00000257181 CRIP1P50238 77 aa9.59□□□□□ -0.87
PRPF38A-201ENST00000257181 M0QXV9 152 aa9.58□□□□□ -0.88
PRPF38A-201ENST00000257181 B5MCH6 92 aa9.58□□□□□ -0.88
PRPF38A-201ENST00000257181 K7EP34 96 aa9.58□□□□□ -0.88
PRPF38A-201ENST00000257181 PRR9Q5T870 116 aa9.58□□□□□ -0.88
PRPF38A-201ENST00000257181 A0A1W2PPM0 123 aa9.57□□□□□ -0.88
PRPF38A-201ENST00000257181 TRBV10-2A0A0K0K1G8 114 aa9.57□□□□□ -0.88
PRPF38A-201ENST00000257181 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.57□□□□□ -0.88
PRPF38A-201ENST00000257181 KIAA1549Q9HCM3 1950 aa9.56□□□□□ -0.88
PRPF38A-201ENST00000257181 PLCE1Q9P212 2302 aa9.56□□□□□ -0.88
PRPF38A-201ENST00000257181 NBDYA0A0U1RRE5 68 aa9.56□□□□□ -0.88
PRPF38A-201ENST00000257181 SBSPONQ8IVN8 264 aa9.56□□□□□ -0.88
PRPF38A-201ENST00000257181 LECT2O14960 151 aa9.55□□□□□ -0.88
PRPF38A-201ENST00000257181 DOPEY2Q9Y3R5 2298 aa9.55□□□□□ -0.88
PRPF38A-201ENST00000257181 NRACQ8N912 160 aa9.55□□□□□ -0.88
PRPF38A-201ENST00000257181 H0Y9J4 135 aa9.54□□□□□ -0.88
PRPF38A-201ENST00000257181 UBE2V1Q13404 147 aa9.54□□□□□ -0.88
PRPF38A-201ENST00000257181 LOC100131303A0A0U1RQF7 123 aa9.54□□□□□ -0.88
PRPF38A-201ENST00000257181 PLA2G2EQ9NZK7 142 aa9.54□□□□□ -0.88
PRPF38A-201ENST00000257181 ATRXP46100 2492 aa9.54□□□□□ -0.88
PRPF38A-201ENST00000257181 C10orf25Q5T742 122 aa9.54□□□□□ -0.88
PRPF38A-201ENST00000257181 NDUFC2-KCTD14E9PQ53 114 aa9.54□□□□□ -0.88
PRPF38A-201ENST00000257181 CHKB-CPT1BH3BT56 60 aa9.53□□□□□ -0.88
PRPF38A-201ENST00000257181 NOTCH2Q04721 2471 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms