RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 TIRAPP58753 221 aa14.24□□□□□ -0.13
PPFIA1-201ENST00000253925 IGLV10-54A0A075B6I4 117 aa14.24□□□□□ -0.13
PPFIA1-201ENST00000253925 SPART-AS1P0CW21 52 aa14.24□□□□□ -0.13
PPFIA1-201ENST00000253925 HIVEP3Q5T1R4 2406 aa14.23□□□□□ -0.13
PPFIA1-201ENST00000253925 TRAV23DV6A0A075B6W5 121 aa14.22□□□□□ -0.13
PPFIA1-201ENST00000253925 TRBV30A0A0K0K1B3 111 aa14.22□□□□□ -0.13
PPFIA1-201ENST00000253925 IGIPA6NJ69 53 aa14.22□□□□□ -0.13
PPFIA1-201ENST00000253925 CXCL5P42830 114 aa14.22□□□□□ -0.13
PPFIA1-201ENST00000253925 PROK1P58294 105 aa14.22□□□□□ -0.13
PPFIA1-201ENST00000253925 TRIAP1O43715 76 aa14.22□□□□□ -0.13
PPFIA1-201ENST00000253925 PRB2P02812 416 aaPredicted RBP14.21□□□□□ -0.13
PPFIA1-201ENST00000253925 ZNF702PQ9H963 129 aa14.21□□□□□ -0.13
PPFIA1-201ENST00000253925 PRO0255Q9UI72 69 aa14.21□□□□□ -0.13
PPFIA1-201ENST00000253925 DEFB121Q5J5C9 76 aa14.21□□□□□ -0.13
PPFIA1-201ENST00000253925 C20orf197Q8N268 126 aa14.21□□□□□ -0.13
PPFIA1-201ENST00000253925 M0QXV9 152 aa14.21□□□□□ -0.14
PPFIA1-201ENST00000253925 A0A1W2PPR1 153 aa14.2□□□□□ -0.14
PPFIA1-201ENST00000253925 UBE2DNLQ8IWF7 75 aa14.2□□□□□ -0.14
PPFIA1-201ENST00000253925 PKIGQ9Y2B9 76 aa14.2□□□□□ -0.14
PPFIA1-201ENST00000253925 BRI3O95415 125 aa14.2□□□□□ -0.14
PPFIA1-201ENST00000253925 HIST2H2BDQ6DRA6 164 aa14.2□□□□□ -0.14
PPFIA1-201ENST00000253925 MYO18BQ8IUG5 2567 aa14.2□□□□□ -0.14
PPFIA1-201ENST00000253925 NDUFA1O15239 70 aa14.2□□□□□ -0.14
PPFIA1-201ENST00000253925 SVIPQ8NHG7 77 aa14.19□□□□□ -0.14
PPFIA1-201ENST00000253925 LINC00308Q8TCZ7 52 aa14.19□□□□□ -0.14
PPFIA1-201ENST00000253925 IGLV2-18A0A075B6J9 118 aa14.18□□□□□ -0.14
PPFIA1-201ENST00000253925 H7C423 109 aa14.18□□□□□ -0.14
PPFIA1-201ENST00000253925 PSCAO43653 123 aa14.18□□□□□ -0.14
PPFIA1-201ENST00000253925 JMJD7-PLA2G4BH0Y9G9 81 aa14.18□□□□□ -0.14
PPFIA1-201ENST00000253925 Q6ZSV7 163 aa14.18□□□□□ -0.14
PPFIA1-201ENST00000253925 TIMM17BO60830 172 aa14.17□□□□□ -0.14
PPFIA1-201ENST00000253925 PIK3CD-AS1Q5SR53 167 aa14.17□□□□□ -0.14
PPFIA1-201ENST00000253925 USP9XQ93008 2570 aaPredicted RBP14.17□□□□□ -0.14
PPFIA1-201ENST00000253925 ESM1Q9NQ30 184 aa14.17□□□□□ -0.14
PPFIA1-201ENST00000253925 FAM236DA0A1B0GTK5 79 aa14.16□□□□□ -0.14
PPFIA1-201ENST00000253925 AVPP01185 164 aa14.16□□□□□ -0.14
PPFIA1-201ENST00000253925 FAM236CP0DP71 79 aa14.16□□□□□ -0.14
PPFIA1-201ENST00000253925 A0A0U1RQV1 116 aa14.15□□□□□ -0.14
PPFIA1-201ENST00000253925 LINC00694P0DN24 101 aa14.15□□□□□ -0.14
PPFIA1-201ENST00000253925 CHD7Q9P2D1 2997 aa14.15□□□□□ -0.14
PPFIA1-201ENST00000253925 DEFB135Q30KP9 77 aa14.15□□□□□ -0.14
PPFIA1-201ENST00000253925 CAMK2N2Q96S95 79 aa14.14□□□□□ -0.15
PPFIA1-201ENST00000253925 RMI2Q96E14 147 aa14.14□□□□□ -0.15
PPFIA1-201ENST00000253925 UBE2D4Q9Y2X8 147 aa14.14□□□□□ -0.15
PPFIA1-201ENST00000253925 USP9YO00507 2555 aaPredicted RBP14.13□□□□□ -0.15
PPFIA1-201ENST00000253925 IGKV2D-24A0A075B6R9 120 aa14.13□□□□□ -0.15
PPFIA1-201ENST00000253925 MRPS36P82909 103 aaKnown RBP14.13□□□□□ -0.15
PPFIA1-201ENST00000253925 TRBV6-4A0A1B0GX49 114 aa14.13□□□□□ -0.15
PPFIA1-201ENST00000253925 SPAG11BQ08648 103 aa14.13□□□□□ -0.15
PPFIA1-201ENST00000253925 UPK3BQ9BT76 320 aa14.12□□□□□ -0.15
PPFIA1-201ENST00000253925 CDK2AP2O75956 126 aa14.11□□□□□ -0.15
PPFIA1-201ENST00000253925 A8MZ25 164 aa14.11□□□□□ -0.15
PPFIA1-201ENST00000253925 UBE2D1P51668 147 aa14.11□□□□□ -0.15
PPFIA1-201ENST00000253925 IGLV4-69A0A075B6H9 119 aa14.11□□□□□ -0.15
PPFIA1-201ENST00000253925 H3BQ85 93 aa14.11□□□□□ -0.15
PPFIA1-201ENST00000253925 MPLKIPQ8TAP9 179 aa14.11□□□□□ -0.15
PPFIA1-201ENST00000253925 EDN2P20800 178 aa14.11□□□□□ -0.15
PPFIA1-201ENST00000253925 ZNF580Q9UK33 172 aa14.11□□□□□ -0.15
PPFIA1-201ENST00000253925 WFDC11Q8NEX6 87 aa14.1□□□□□ -0.15
PPFIA1-201ENST00000253925 ABCA2Q9BZC7 2435 aa14.1□□□□□ -0.15
PPFIA1-201ENST00000253925 IMUPQ9GZP8 106 aa14.1□□□□□ -0.15
PPFIA1-201ENST00000253925 TLN2Q9Y4G6 2542 aa14.1□□□□□ -0.15
PPFIA1-201ENST00000253925 IBA57-AS1B1ANH7 110 aa14.1□□□□□ -0.15
PPFIA1-201ENST00000253925 WFDC9Q8NEX5 89 aa14.1□□□□□ -0.15
PPFIA1-201ENST00000253925 PRRC2CQ9Y520 2896 aaKnown RBP14.09□□□□□ -0.15
PPFIA1-201ENST00000253925 DEFB4AO15263 64 aa14.09□□□□□ -0.15
PPFIA1-201ENST00000253925 DEFB105AQ8NG35 78 aa14.09□□□□□ -0.15
PPFIA1-201ENST00000253925 TRBV6-8A0A0A6YYG3 113 aa14.09□□□□□ -0.15
PPFIA1-201ENST00000253925 SMIM9A6NGZ8 99 aa14.09□□□□□ -0.15
PPFIA1-201ENST00000253925 HTTP42858 3142 aa14.09□□□□□ -0.15
PPFIA1-201ENST00000253925 TMEM256-PLSCR3K7ERE1 68 aa14.08□□□□□ -0.15
PPFIA1-201ENST00000253925 COX7CP15954 63 aa14.08□□□□□ -0.15
PPFIA1-201ENST00000253925 C18orf65Q6ZTR6 163 aa14.08□□□□□ -0.16
PPFIA1-201ENST00000253925 PCSK5Q92824 1860 aa14.08□□□□□ -0.16
PPFIA1-201ENST00000253925 IGHV4-28A0A0C4DH34 117 aa14.08□□□□□ -0.16
PPFIA1-201ENST00000253925 KLK12Q9UKR0 248 aa14.08□□□□□ -0.16
PPFIA1-201ENST00000253925 Q6Q795 121 aa14.08□□□□□ -0.16
PPFIA1-201ENST00000253925 NCR3O14931 201 aa14.07□□□□□ -0.16
PPFIA1-201ENST00000253925 PRM2P04554 102 aa14.07□□□□□ -0.16
PPFIA1-201ENST00000253925 SERP2Q8N6R1 65 aa14.06□□□□□ -0.16
PPFIA1-201ENST00000253925 NREPQ16612 68 aa14.06□□□□□ -0.16
PPFIA1-201ENST00000253925 V9GYY9 64 aa14.06□□□□□ -0.16
PPFIA1-201ENST00000253925 LST1O00453 97 aa14.06□□□□□ -0.16
PPFIA1-201ENST00000253925 FAM110AQ9BQ89 295 aa14.06□□□□□ -0.16
PPFIA1-201ENST00000253925 LINC01546A6NGU7 62 aa14.05□□□□□ -0.16
PPFIA1-201ENST00000253925 ENHOQ6UWT2 76 aa14.05□□□□□ -0.16
PPFIA1-201ENST00000253925 LYRM9A8MSI8 78 aa14.05□□□□□ -0.16
PPFIA1-201ENST00000253925 FAM222AQ5U5X8 452 aa14.04□□□□□ -0.16
PPFIA1-201ENST00000253925 LINC00269Q8N2A0 174 aa14.04□□□□□ -0.16
PPFIA1-201ENST00000253925 RPL18AQ02543 176 aaKnown RBP14.04□□□□□ -0.16
PPFIA1-201ENST00000253925 USP17L23D6RBM5 183 aa14.02□□□□□ -0.16
PPFIA1-201ENST00000253925 TSPEAR-AS2P59090 65 aa14.02□□□□□ -0.16
PPFIA1-201ENST00000253925 REG3AQ06141 175 aa14.02□□□□□ -0.16
PPFIA1-201ENST00000253925 DIRC1Q969H9 104 aa14.02□□□□□ -0.16
PPFIA1-201ENST00000253925 FUSP35637 526 aaKnown RBP eCLIP14.02□□□□□ -0.17
PPFIA1-201ENST00000253925 HRCT1Q6UXD1 115 aa14.02□□□□□ -0.17
PPFIA1-201ENST00000253925 UBE2D3P61077 147 aa14.02□□□□□ -0.17
PPFIA1-201ENST00000253925 UBE2D2P62837 147 aa14.02□□□□□ -0.17
PPFIA1-201ENST00000253925 POM121L12Q8N7R1 296 aa14.01□□□□□ -0.17
PPFIA1-201ENST00000253925 PRRC2AP48634 2157 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 277.3 ms