RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 NTM-AS1Q6ZSK4 140 aa17.92■□□□□ 0.46
TMEM55B-201ENST00000250489 CIDEAO60543 219 aa17.91■□□□□ 0.46
TMEM55B-201ENST00000250489 DGAT2L7PQ6IED9 249 aa17.91■□□□□ 0.46
TMEM55B-201ENST00000250489 TRAV8-3A0A0A6YYJ7 113 aa17.9■□□□□ 0.46
TMEM55B-201ENST00000250489 IGHV1-58A0A0C4DH39 117 aa17.9■□□□□ 0.46
TMEM55B-201ENST00000250489 LINC00694P0DN24 101 aa17.9■□□□□ 0.46
TMEM55B-201ENST00000250489 SPATA3Q8NHX4 192 aa17.9■□□□□ 0.46
TMEM55B-201ENST00000250489 INSL3P51460 131 aa17.89■□□□□ 0.45
TMEM55B-201ENST00000250489 SBSPONQ8IVN8 264 aa17.89■□□□□ 0.45
TMEM55B-201ENST00000250489 C10orf126Q8N4M7 172 aa17.89■□□□□ 0.45
TMEM55B-201ENST00000250489 TRBV6-4A0A1B0GX49 114 aa17.88■□□□□ 0.45
TMEM55B-201ENST00000250489 NOTCH2Q04721 2471 aa17.88■□□□□ 0.45
TMEM55B-201ENST00000250489 C9orf66Q5T8R8 295 aa17.87■□□□□ 0.45
TMEM55B-201ENST00000250489 GEMIN7Q9H840 131 aaKnown RBP17.87■□□□□ 0.45
TMEM55B-201ENST00000250489 TIRAPP58753 221 aa17.86■□□□□ 0.45
TMEM55B-201ENST00000250489 VSIG2Q96IQ7 327 aa17.86■□□□□ 0.45
TMEM55B-201ENST00000250489 CSDC2Q9Y534 153 aaKnown RBP17.86■□□□□ 0.45
TMEM55B-201ENST00000250489 PGPEP1Q9NXJ5 209 aa17.86■□□□□ 0.45
TMEM55B-201ENST00000250489 IGLV5-45A0A087WSX0 123 aa17.85■□□□□ 0.45
TMEM55B-201ENST00000250489 TRGV4A0A0C4DH28 118 aa17.85■□□□□ 0.45
TMEM55B-201ENST00000250489 A0A0J9YXY3 114 aa17.85■□□□□ 0.45
TMEM55B-201ENST00000250489 LOC100131303A0A0U1RQF7 123 aa17.85■□□□□ 0.45
TMEM55B-201ENST00000250489 SPINK8P0C7L1 97 aa17.85■□□□□ 0.45
TMEM55B-201ENST00000250489 GTSF1LQ9H1H1 148 aa17.85■□□□□ 0.45
TMEM55B-201ENST00000250489 NSD1Q96L73 2696 aaPredicted RBP17.84■□□□□ 0.45
TMEM55B-201ENST00000250489 CRLF1O75462 422 aa17.84■□□□□ 0.45
TMEM55B-201ENST00000250489 FOSL1P15407 271 aa17.84■□□□□ 0.45
TMEM55B-201ENST00000250489 NOTCH3Q9UM47 2321 aa17.84■□□□□ 0.45
TMEM55B-201ENST00000250489 C2CD3Q4AC94 2353 aa17.84■□□□□ 0.45
TMEM55B-201ENST00000250489 FHL2Q14192 279 aa17.84■□□□□ 0.45
TMEM55B-201ENST00000250489 OCIAD2Q56VL3 154 aa17.84■□□□□ 0.45
TMEM55B-201ENST00000250489 APOMO95445 188 aa17.83■□□□□ 0.44
TMEM55B-201ENST00000250489 CDKN2A-AS1Q9UH64 79 aa17.83■□□□□ 0.44
TMEM55B-201ENST00000250489 TMEM238C9JI98 176 aa17.82■□□□□ 0.44
TMEM55B-201ENST00000250489 FN1P02751 2386 aaKnown RBP17.82■□□□□ 0.44
TMEM55B-201ENST00000250489 FAM19A3Q7Z5A8 133 aa17.81■□□□□ 0.44
TMEM55B-201ENST00000250489 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.81■□□□□ 0.44
TMEM55B-201ENST00000250489 NDUFA12Q9UI09 145 aa17.81■□□□□ 0.44
TMEM55B-201ENST00000250489 CFC1BP0CG36 223 aa17.8■□□□□ 0.44
TMEM55B-201ENST00000250489 CFC1P0CG37 223 aa17.8■□□□□ 0.44
TMEM55B-201ENST00000250489 SMAGPQ0VAQ4 97 aa17.8■□□□□ 0.44
TMEM55B-201ENST00000250489 TMEM243Q9BU79 118 aa17.8■□□□□ 0.44
TMEM55B-201ENST00000250489 A8MZ25 164 aa17.8■□□□□ 0.44
TMEM55B-201ENST00000250489 TSPAN13O95857 204 aa17.8■□□□□ 0.44
TMEM55B-201ENST00000250489 COX6A2Q02221 97 aa17.8■□□□□ 0.44
TMEM55B-201ENST00000250489 LINC00242Q5T6M2 205 aa17.8■□□□□ 0.44
TMEM55B-201ENST00000250489 KIR2DL5BQ8NHK3 375 aa17.8■□□□□ 0.44
TMEM55B-201ENST00000250489 RBX1P62877 108 aa17.79■□□□□ 0.44
TMEM55B-201ENST00000250489 LINC00612Q8N6U2 182 aa17.79■□□□□ 0.44
TMEM55B-201ENST00000250489 CITED1Q99966 193 aa17.79■□□□□ 0.44
TMEM55B-201ENST00000250489 CDC42SE2Q9NRR3 84 aa17.79■□□□□ 0.44
TMEM55B-201ENST00000250489 X6R8D5 127 aa17.79■□□□□ 0.44
TMEM55B-201ENST00000250489 HERVK_113P63121 156 aa17.79■□□□□ 0.44
TMEM55B-201ENST00000250489 LITAFQ99732 161 aa17.79■□□□□ 0.44
TMEM55B-201ENST00000250489 ZFAND6Q6FIF0 208 aa17.78■□□□□ 0.44
TMEM55B-201ENST00000250489 MUSTN1Q8IVN3 82 aa17.77■□□□□ 0.44
TMEM55B-201ENST00000250489 A4D1N5 150 aa17.77■□□□□ 0.43
TMEM55B-201ENST00000250489 UBE2L6O14933 153 aa17.77■□□□□ 0.43
TMEM55B-201ENST00000250489 DEFB130BP0DP73 79 aa17.76■□□□□ 0.43
TMEM55B-201ENST00000250489 DEFB130AP0DP74 79 aa17.76■□□□□ 0.43
TMEM55B-201ENST00000250489 RPL24P83731 157 aaKnown RBP17.75■□□□□ 0.43
TMEM55B-201ENST00000250489 TMEM101Q96IK0 257 aa17.75■□□□□ 0.43
TMEM55B-201ENST00000250489 SMIM9A6NGZ8 99 aa17.75■□□□□ 0.43
TMEM55B-201ENST00000250489 H7C423 109 aa17.75■□□□□ 0.43
TMEM55B-201ENST00000250489 TRAV13-1A0A0B4J241 112 aa17.74■□□□□ 0.43
TMEM55B-201ENST00000250489 H3BMG7 143 aa17.74■□□□□ 0.43
TMEM55B-201ENST00000250489 HIVEP1P15822 2718 aa17.74■□□□□ 0.43
TMEM55B-201ENST00000250489 IGLV5-39A0A0G2JS06 123 aa17.73■□□□□ 0.43
TMEM55B-201ENST00000250489 PRO1854Q9UHT4 67 aa17.73■□□□□ 0.43
TMEM55B-201ENST00000250489 K7ERU9 68 aa17.72■□□□□ 0.43
TMEM55B-201ENST00000250489 EIF4EBP3O60516 100 aaPredicted RBP17.72■□□□□ 0.43
TMEM55B-201ENST00000250489 SPANXDQ9BXN6 97 aa17.72■□□□□ 0.43
TMEM55B-201ENST00000250489 SPANXCQ9NY87 97 aa17.72■□□□□ 0.43
TMEM55B-201ENST00000250489 ADAMTSL4-AS1Q5T5F5 129 aa17.71■□□□□ 0.43
TMEM55B-201ENST00000250489 FLNBO75369 2602 aaKnown RBP17.71■□□□□ 0.43
TMEM55B-201ENST00000250489 VWFP04275 2813 aa17.71■□□□□ 0.43
TMEM55B-201ENST00000250489 TRBV6-8A0A0A6YYG3 113 aa17.7■□□□□ 0.42
TMEM55B-201ENST00000250489 F8W1H4 67 aa17.7■□□□□ 0.42
TMEM55B-201ENST00000250489 NDUFA1O15239 70 aa17.7■□□□□ 0.42
TMEM55B-201ENST00000250489 A0A0B4J2C4 111 aa17.7■□□□□ 0.42
TMEM55B-201ENST00000250489 LOC107984156A0A0G2JMH3 177 aa17.69■□□□□ 0.42
TMEM55B-201ENST00000250489 SMIM1B2RUZ4 78 aa17.69■□□□□ 0.42
TMEM55B-201ENST00000250489 RNF151Q2KHN1 245 aa17.69■□□□□ 0.42
TMEM55B-201ENST00000250489 SFTA2Q6UW10 78 aa17.69■□□□□ 0.42
TMEM55B-201ENST00000250489 ARL17AQ8IVW1 177 aa17.69■□□□□ 0.42
TMEM55B-201ENST00000250489 GAGE6Q13070 117 aa17.68■□□□□ 0.42
TMEM55B-201ENST00000250489 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.68■□□□□ 0.42
TMEM55B-201ENST00000250489 TIMM17BO60830 172 aa17.68■□□□□ 0.42
TMEM55B-201ENST00000250489 MIAQ16674 131 aa17.68■□□□□ 0.42
TMEM55B-201ENST00000250489 CBY1Q9Y3M2 126 aa17.67■□□□□ 0.42
TMEM55B-201ENST00000250489 PRO0461Q9UI25 63 aa17.66■□□□□ 0.42
TMEM55B-201ENST00000250489 TENM1Q9UKZ4 2725 aa17.66■□□□□ 0.42
TMEM55B-201ENST00000250489 F5H768 121 aa17.66■□□□□ 0.42
TMEM55B-201ENST00000250489 PRSS2P07478 247 aa17.66■□□□□ 0.42
TMEM55B-201ENST00000250489 APOC4P55056 127 aa17.66■□□□□ 0.42
TMEM55B-201ENST00000250489 WFDC2Q14508 124 aa17.66■□□□□ 0.42
TMEM55B-201ENST00000250489 DEFB135Q30KP9 77 aa17.66■□□□□ 0.42
TMEM55B-201ENST00000250489 LYRM7Q5U5X0 104 aa17.66■□□□□ 0.42
TMEM55B-201ENST00000250489 IGHV3-33P01772 117 aa17.65■□□□□ 0.42
TMEM55B-201ENST00000250489 FAM222AQ5U5X8 452 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms