RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 SPANXB1Q9NS25 103 aaPredicted RBP15.45■□□□□ 0.06
CLN6-201ENST00000249806 TRBV10-1A0A0K0K1A3 114 aa15.44■□□□□ 0.06
CLN6-201ENST00000249806 TIMM21Q9BVV7 248 aa15.44■□□□□ 0.06
CLN6-201ENST00000249806 TMEM238LA0A1B0GVL6 79 aa15.44■□□□□ 0.06
CLN6-201ENST00000249806 TINCRA0A1B0GVN0 87 aa15.44■□□□□ 0.06
CLN6-201ENST00000249806 A6NJY4 79 aa15.44■□□□□ 0.06
CLN6-201ENST00000249806 UBE2D1P51668 147 aa15.44■□□□□ 0.06
CLN6-201ENST00000249806 DGAT2L7PQ6IED9 249 aa15.44■□□□□ 0.06
CLN6-201ENST00000249806 APOMO95445 188 aa15.43■□□□□ 0.06
CLN6-201ENST00000249806 UBE2D3P61077 147 aa15.43■□□□□ 0.06
CLN6-201ENST00000249806 UBE2D2P62837 147 aa15.43■□□□□ 0.06
CLN6-201ENST00000249806 OCIAD2Q56VL3 154 aa15.43■□□□□ 0.06
CLN6-201ENST00000249806 C10orf126Q8N4M7 172 aa15.43■□□□□ 0.06
CLN6-201ENST00000249806 A8MZ25 164 aa15.42■□□□□ 0.06
CLN6-201ENST00000249806 OVOL2Q9BRP0 275 aa15.42■□□□□ 0.06
CLN6-201ENST00000249806 PGPEP1Q9NXJ5 209 aa15.42■□□□□ 0.06
CLN6-201ENST00000249806 NBEAL2Q6ZNJ1 2754 aa15.42■□□□□ 0.06
CLN6-201ENST00000249806 DAZ4Q86SG3 579 aaKnown RBP15.41■□□□□ 0.06
CLN6-201ENST00000249806 DAZ3Q9NR90 486 aaKnown RBP15.41■□□□□ 0.06
CLN6-201ENST00000249806 LOC100131303A0A0U1RQF7 123 aa15.41■□□□□ 0.06
CLN6-201ENST00000249806 SPINK8P0C7L1 97 aa15.4■□□□□ 0.06
CLN6-201ENST00000249806 RBX1P62877 108 aa15.4■□□□□ 0.06
CLN6-201ENST00000249806 IGHV1-58A0A0C4DH39 117 aa15.4■□□□□ 0.06
CLN6-201ENST00000249806 GEMIN7Q9H840 131 aaKnown RBP15.39■□□□□ 0.05
CLN6-201ENST00000249806 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.39■□□□□ 0.05
CLN6-201ENST00000249806 CDKN2A-AS1Q9UH64 79 aa15.39■□□□□ 0.05
CLN6-201ENST00000249806 A0A0J9YXY3 114 aa15.38■□□□□ 0.05
CLN6-201ENST00000249806 VSIG2Q96IQ7 327 aa15.38■□□□□ 0.05
CLN6-201ENST00000249806 CFC1BP0CG36 223 aa15.37■□□□□ 0.05
CLN6-201ENST00000249806 CFC1P0CG37 223 aa15.37■□□□□ 0.05
CLN6-201ENST00000249806 COX6A2Q02221 97 aa15.37■□□□□ 0.05
CLN6-201ENST00000249806 TRGV4A0A0C4DH28 118 aa15.37■□□□□ 0.05
CLN6-201ENST00000249806 H3BMG7 143 aa15.37■□□□□ 0.05
CLN6-201ENST00000249806 SFTA2Q6UW10 78 aa15.37■□□□□ 0.05
CLN6-201ENST00000249806 ATRQ13535 2644 aa15.36■□□□□ 0.05
CLN6-201ENST00000249806 RNF151Q2KHN1 245 aa15.36■□□□□ 0.05
CLN6-201ENST00000249806 TRRAPQ9Y4A5 3859 aa15.36■□□□□ 0.05
CLN6-201ENST00000249806 CRLF1O75462 422 aa15.36■□□□□ 0.05
CLN6-201ENST00000249806 TSPAN13O95857 204 aa15.36■□□□□ 0.05
CLN6-201ENST00000249806 SBSPONQ8IVN8 264 aa15.36■□□□□ 0.05
CLN6-201ENST00000249806 FOSL1P15407 271 aa15.35■□□□□ 0.05
CLN6-201ENST00000249806 TRBV6-4A0A1B0GX49 114 aa15.35■□□□□ 0.05
CLN6-201ENST00000249806 MUSTN1Q8IVN3 82 aa15.35■□□□□ 0.05
CLN6-201ENST00000249806 NDUFA12Q9UI09 145 aa15.35■□□□□ 0.05
CLN6-201ENST00000249806 A4D1N5 150 aa15.34■□□□□ 0.05
CLN6-201ENST00000249806 FHL2Q14192 279 aa15.34■□□□□ 0.05
CLN6-201ENST00000249806 TIRAPP58753 221 aa15.33■□□□□ 0.05
CLN6-201ENST00000249806 LINC00242Q5T6M2 205 aa15.33■□□□□ 0.05
CLN6-201ENST00000249806 CSDC2Q9Y534 153 aaKnown RBP15.33■□□□□ 0.04
CLN6-201ENST00000249806 TRAV13-1A0A0B4J241 112 aa15.32■□□□□ 0.04
CLN6-201ENST00000249806 TMEM238C9JI98 176 aa15.32■□□□□ 0.04
CLN6-201ENST00000249806 DEFB130BP0DP73 79 aa15.32■□□□□ 0.04
CLN6-201ENST00000249806 DEFB130AP0DP74 79 aa15.32■□□□□ 0.04
CLN6-201ENST00000249806 LITAFQ99732 161 aa15.32■□□□□ 0.04
CLN6-201ENST00000249806 TEP1Q99973 2627 aaKnown RBP15.32■□□□□ 0.04
CLN6-201ENST00000249806 IGLV5-45A0A087WSX0 123 aa15.32■□□□□ 0.04
CLN6-201ENST00000249806 CDC42SE2Q9NRR3 84 aa15.32■□□□□ 0.04
CLN6-201ENST00000249806 EIF4EBP3O60516 100 aaPredicted RBP15.31■□□□□ 0.04
CLN6-201ENST00000249806 TMEM101Q96IK0 257 aa15.31■□□□□ 0.04
CLN6-201ENST00000249806 GTSF1LQ9H1H1 148 aa15.31■□□□□ 0.04
CLN6-201ENST00000249806 LOC107984156A0A0G2JMH3 177 aa15.31■□□□□ 0.04
CLN6-201ENST00000249806 ADAMTSL4-AS1Q5T5F5 129 aa15.31■□□□□ 0.04
CLN6-201ENST00000249806 ARL17AQ8IVW1 177 aa15.31■□□□□ 0.04
CLN6-201ENST00000249806 MTURNQ8N3F0 131 aa15.31■□□□□ 0.04
CLN6-201ENST00000249806 CIDEAO60543 219 aa15.3■□□□□ 0.04
CLN6-201ENST00000249806 INSL3P51460 131 aa15.3■□□□□ 0.04
CLN6-201ENST00000249806 C9orf66Q5T8R8 295 aa15.3■□□□□ 0.04
CLN6-201ENST00000249806 TMEM243Q9BU79 118 aa15.3■□□□□ 0.04
CLN6-201ENST00000249806 K7ERU9 68 aa15.29■□□□□ 0.04
CLN6-201ENST00000249806 UBE2L6O14933 153 aa15.29■□□□□ 0.04
CLN6-201ENST00000249806 HERVK_113P63121 156 aa15.29■□□□□ 0.04
CLN6-201ENST00000249806 WFDC2Q14508 124 aa15.29■□□□□ 0.04
CLN6-201ENST00000249806 PRO1854Q9UHT4 67 aa15.29■□□□□ 0.04
CLN6-201ENST00000249806 RPL24P83731 157 aaKnown RBP15.28■□□□□ 0.04
CLN6-201ENST00000249806 ZFAND6Q6FIF0 208 aa15.28■□□□□ 0.04
CLN6-201ENST00000249806 X6R8D5 127 aa15.28■□□□□ 0.04
CLN6-201ENST00000249806 PRSS2P07478 247 aa15.28■□□□□ 0.04
CLN6-201ENST00000249806 CBY1Q9Y3M2 126 aa15.28■□□□□ 0.04
CLN6-201ENST00000249806 F8W1H4 67 aa15.27■□□□□ 0.03
CLN6-201ENST00000249806 KIR2DL5BQ8NHK3 375 aa15.26■□□□□ 0.03
CLN6-201ENST00000249806 FAM19A3Q7Z5A8 133 aa15.25■□□□□ 0.03
CLN6-201ENST00000249806 PSMB2P49721 201 aa15.24■□□□□ 0.03
CLN6-201ENST00000249806 NPC2P61916 151 aa15.24■□□□□ 0.03
CLN6-201ENST00000249806 GAGE6Q13070 117 aa15.24■□□□□ 0.03
CLN6-201ENST00000249806 CITED1Q99966 193 aa15.24■□□□□ 0.03
CLN6-201ENST00000249806 PRO0461Q9UI25 63 aa15.24■□□□□ 0.03
CLN6-201ENST00000249806 IGLV5-39A0A0G2JS06 123 aa15.23■□□□□ 0.03
CLN6-201ENST00000249806 VPS25Q9BRG1 176 aa15.23■□□□□ 0.03
CLN6-201ENST00000249806 TRBV6-8A0A0A6YYG3 113 aa15.23■□□□□ 0.03
CLN6-201ENST00000249806 SMAGPQ0VAQ4 97 aa15.23■□□□□ 0.03
CLN6-201ENST00000249806 LINC00612Q8N6U2 182 aa15.23■□□□□ 0.03
CLN6-201ENST00000249806 TEX48A0A1B0GUV7 120 aa15.22■□□□□ 0.03
CLN6-201ENST00000249806 SMIM1B2RUZ4 78 aa15.22■□□□□ 0.03
CLN6-201ENST00000249806 G3V4G9 280 aa15.22■□□□□ 0.03
CLN6-201ENST00000249806 H7C2G1 150 aa15.22■□□□□ 0.03
CLN6-201ENST00000249806 NDUFA1O15239 70 aa15.21■□□□□ 0.03
CLN6-201ENST00000249806 IGHV3-33P01772 117 aa15.21■□□□□ 0.03
CLN6-201ENST00000249806 DEFB135Q30KP9 77 aa15.21■□□□□ 0.03
CLN6-201ENST00000249806 DAND5Q8N907 189 aa15.21■□□□□ 0.03
CLN6-201ENST00000249806 SPANXDQ9BXN6 97 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms