RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 A0A0J9YY99 117 aa13.19□□□□□ -0.3
TUBA4A-201ENST00000248437 SMIM9A6NGZ8 99 aa13.19□□□□□ -0.3
TUBA4A-201ENST00000248437 KIR2DL5BQ8NHK3 375 aa13.19□□□□□ -0.3
TUBA4A-201ENST00000248437 GTSF1LQ9H1H1 148 aa13.19□□□□□ -0.3
TUBA4A-201ENST00000248437 CSDC2Q9Y534 153 aaKnown RBP13.19□□□□□ -0.3
TUBA4A-201ENST00000248437 GAGE12JA6NER3 117 aa13.18□□□□□ -0.3
TUBA4A-201ENST00000248437 GAGE4Q13068 117 aa13.18□□□□□ -0.3
TUBA4A-201ENST00000248437 GAGE5Q13069 117 aa13.18□□□□□ -0.3
TUBA4A-201ENST00000248437 GAGE13Q4V321 117 aa13.18□□□□□ -0.3
TUBA4A-201ENST00000248437 RNASE13Q5GAN3 156 aaKnown RBP13.18□□□□□ -0.3
TUBA4A-201ENST00000248437 SPANXB1Q9NS25 103 aaPredicted RBP13.18□□□□□ -0.3
TUBA4A-201ENST00000248437 STAB1Q9NY15 2570 aa13.18□□□□□ -0.3
TUBA4A-201ENST00000248437 SMAGPQ0VAQ4 97 aa13.18□□□□□ -0.3
TUBA4A-201ENST00000248437 DGAT2L7PQ6IED9 249 aa13.18□□□□□ -0.3
TUBA4A-201ENST00000248437 NTM-AS1Q6ZSK4 140 aa13.18□□□□□ -0.3
TUBA4A-201ENST00000248437 TRGV4A0A0C4DH28 118 aa13.17□□□□□ -0.3
TUBA4A-201ENST00000248437 SBSPONQ8IVN8 264 aa13.17□□□□□ -0.3
TUBA4A-201ENST00000248437 LINC00612Q8N6U2 182 aa13.17□□□□□ -0.3
TUBA4A-201ENST00000248437 OR5A1Q8NGJ0 315 aa13.17□□□□□ -0.3
TUBA4A-201ENST00000248437 A0A1B0GWB2 263 aa13.17□□□□□ -0.3
TUBA4A-201ENST00000248437 A0A1W2PPM0 123 aa13.16□□□□□ -0.3
TUBA4A-201ENST00000248437 K7ERJ3 54 aa13.16□□□□□ -0.3
TUBA4A-201ENST00000248437 UBE2D1P51668 147 aa13.16□□□□□ -0.3
TUBA4A-201ENST00000248437 SRSF9Q13242 221 aaKnown RBP eCLIP13.16□□□□□ -0.3
TUBA4A-201ENST00000248437 FHL2Q14192 279 aa13.16□□□□□ -0.3
TUBA4A-201ENST00000248437 C12orf74Q32Q52 190 aa13.16□□□□□ -0.3
TUBA4A-201ENST00000248437 X6R8D5 127 aa13.16□□□□□ -0.3
TUBA4A-201ENST00000248437 WFDC9Q8NEX5 89 aa13.15□□□□□ -0.3
TUBA4A-201ENST00000248437 TMEM238LA0A1B0GVL6 79 aa13.15□□□□□ -0.3
TUBA4A-201ENST00000248437 A6NJY4 79 aa13.15□□□□□ -0.3
TUBA4A-201ENST00000248437 GTF2H5Q6ZYL4 71 aa13.15□□□□□ -0.3
TUBA4A-201ENST00000248437 GAGE10A6NGK3 116 aa13.14□□□□□ -0.31
TUBA4A-201ENST00000248437 TIRAPP58753 221 aa13.14□□□□□ -0.31
TUBA4A-201ENST00000248437 IGHV1-58A0A0C4DH39 117 aa13.14□□□□□ -0.31
TUBA4A-201ENST00000248437 WIPF1O43516 503 aa13.14□□□□□ -0.31
TUBA4A-201ENST00000248437 LINC00694P0DN24 101 aa13.14□□□□□ -0.31
TUBA4A-201ENST00000248437 IGHV3-30-3P0DP02 117 aa13.14□□□□□ -0.31
TUBA4A-201ENST00000248437 SAMD5Q5TGI4 173 aa13.14□□□□□ -0.31
TUBA4A-201ENST00000248437 COL6A5A8TX70 2615 aa13.13□□□□□ -0.31
TUBA4A-201ENST00000248437 IGLV5-45A0A087WSX0 123 aa13.13□□□□□ -0.31
TUBA4A-201ENST00000248437 NAA38Q9BRA0 125 aaKnown RBP13.13□□□□□ -0.31
TUBA4A-201ENST00000248437 GEMIN7Q9H840 131 aaKnown RBP13.13□□□□□ -0.31
TUBA4A-201ENST00000248437 IGHV3-64A0A075B6Q5 118 aa13.13□□□□□ -0.31
TUBA4A-201ENST00000248437 H7C423 109 aa13.13□□□□□ -0.31
TUBA4A-201ENST00000248437 K7EP34 96 aa13.13□□□□□ -0.31
TUBA4A-201ENST00000248437 APOC4P55056 127 aa13.13□□□□□ -0.31
TUBA4A-201ENST00000248437 FAM19A3Q7Z5A8 133 aa13.13□□□□□ -0.31
TUBA4A-201ENST00000248437 TMEM243Q9BU79 118 aa13.13□□□□□ -0.31
TUBA4A-201ENST00000248437 FABP2P12104 132 aa13.12□□□□□ -0.31
TUBA4A-201ENST00000248437 LOC100131303A0A0U1RQF7 123 aa13.11□□□□□ -0.31
TUBA4A-201ENST00000248437 VSIG2Q96IQ7 327 aa13.11□□□□□ -0.31
TUBA4A-201ENST00000248437 IGLL5B9A064 214 aa13.1□□□□□ -0.31
TUBA4A-201ENST00000248437 IGHV3-30P01768 117 aa13.1□□□□□ -0.31
TUBA4A-201ENST00000248437 IGHV3-30-5P0DP03 117 aa13.1□□□□□ -0.31
TUBA4A-201ENST00000248437 UBE2L6O14933 153 aa13.1□□□□□ -0.31
TUBA4A-201ENST00000248437 DEFB130BP0DP73 79 aa13.1□□□□□ -0.31
TUBA4A-201ENST00000248437 DEFB130AP0DP74 79 aa13.1□□□□□ -0.31
TUBA4A-201ENST00000248437 HERVK_113P63121 156 aa13.1□□□□□ -0.31
TUBA4A-201ENST00000248437 CDC42SE2Q9NRR3 84 aa13.1□□□□□ -0.31
TUBA4A-201ENST00000248437 TRAV8-3A0A0A6YYJ7 113 aa13.09□□□□□ -0.31
TUBA4A-201ENST00000248437 C3orf56Q8N813 242 aa13.09□□□□□ -0.31
TUBA4A-201ENST00000248437 SPCS1Q9Y6A9 102 aa13.09□□□□□ -0.31
TUBA4A-201ENST00000248437 LYRM9A8MSI8 78 aa13.08□□□□□ -0.31
TUBA4A-201ENST00000248437 C10orf126Q8N4M7 172 aa13.08□□□□□ -0.31
TUBA4A-201ENST00000248437 TMEM238C9JI98 176 aa13.07□□□□□ -0.32
TUBA4A-201ENST00000248437 LINC00242Q5T6M2 205 aa13.07□□□□□ -0.32
TUBA4A-201ENST00000248437 TMEM101Q96IK0 257 aa13.07□□□□□ -0.32
TUBA4A-201ENST00000248437 CDKN2A-AS1Q9UH64 79 aa13.07□□□□□ -0.32
TUBA4A-201ENST00000248437 A0A0J9YXY3 114 aa13.07□□□□□ -0.32
TUBA4A-201ENST00000248437 SPINK8P0C7L1 97 aa13.07□□□□□ -0.32
TUBA4A-201ENST00000248437 TRBV6-8A0A0A6YYG3 113 aa13.06□□□□□ -0.32
TUBA4A-201ENST00000248437 DEFB135Q30KP9 77 aa13.06□□□□□ -0.32
TUBA4A-201ENST00000248437 ZFAND6Q6FIF0 208 aa13.05□□□□□ -0.32
TUBA4A-201ENST00000248437 NDUFA12Q9UI09 145 aa13.05□□□□□ -0.32
TUBA4A-201ENST00000248437 COX6A2Q02221 97 aa13.04□□□□□ -0.32
TUBA4A-201ENST00000248437 FAM222AQ5U5X8 452 aa13.04□□□□□ -0.32
TUBA4A-201ENST00000248437 PRO0255Q9UI72 69 aa13.03□□□□□ -0.32
TUBA4A-201ENST00000248437 IGLV5-39A0A0G2JS06 123 aa13.03□□□□□ -0.32
TUBA4A-201ENST00000248437 CMYA5Q8N3K9 4069 aa13.02□□□□□ -0.32
TUBA4A-201ENST00000248437 TRAV13-1A0A0B4J241 112 aa13.02□□□□□ -0.33
TUBA4A-201ENST00000248437 SHISA2Q6UWI4 295 aa13.02□□□□□ -0.33
TUBA4A-201ENST00000248437 PKD1L1Q8TDX9 2849 aa13.01□□□□□ -0.33
TUBA4A-201ENST00000248437 MIFP14174 115 aa13.01□□□□□ -0.33
TUBA4A-201ENST00000248437 LITAFQ99732 161 aa13.01□□□□□ -0.33
TUBA4A-201ENST00000248437 GYPEP15421 78 aa13.01□□□□□ -0.33
TUBA4A-201ENST00000248437 RPL24P83731 157 aaKnown RBP13.01□□□□□ -0.33
TUBA4A-201ENST00000248437 PGPEP1Q9NXJ5 209 aa13.01□□□□□ -0.33
TUBA4A-201ENST00000248437 IGHV4-28A0A0C4DH34 117 aa13□□□□□ -0.33
TUBA4A-201ENST00000248437 ATP6V0E2Q8NHE4 81 aa13□□□□□ -0.33
TUBA4A-201ENST00000248437 A8MZ25 164 aa13□□□□□ -0.33
TUBA4A-201ENST00000248437 NDUFA1O15239 70 aa13□□□□□ -0.33
TUBA4A-201ENST00000248437 APOMO95445 188 aa13□□□□□ -0.33
TUBA4A-201ENST00000248437 CFC1BP0CG36 223 aa13□□□□□ -0.33
TUBA4A-201ENST00000248437 CFC1P0CG37 223 aa13□□□□□ -0.33
TUBA4A-201ENST00000248437 IGHV4-30-4P0DP06 118 aa13□□□□□ -0.33
TUBA4A-201ENST00000248437 GAGE6Q13070 117 aa13□□□□□ -0.33
TUBA4A-201ENST00000248437 SPANXDQ9BXN6 97 aa13□□□□□ -0.33
TUBA4A-201ENST00000248437 SPANXCQ9NY87 97 aa13□□□□□ -0.33
TUBA4A-201ENST00000248437 Q8NAQ8 132 aa12.99□□□□□ -0.33
TUBA4A-201ENST00000248437 CHCHD5Q9BSY4 110 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms