RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 GEMIN7Q9H840 131 aaKnown RBP12.16□□□□□ -0.46
SSPN-201ENST00000242729 ERG28Q9UKR5 140 aa12.16□□□□□ -0.46
SSPN-201ENST00000242729 DNAJC9-AS1A6NH13 148 aa12.15□□□□□ -0.46
SSPN-201ENST00000242729 IGHV3-33P01772 117 aa12.15□□□□□ -0.46
SSPN-201ENST00000242729 COX6A2Q02221 97 aa12.15□□□□□ -0.46
SSPN-201ENST00000242729 TMEM263Q8WUH6 116 aaKnown RBP12.15□□□□□ -0.46
SSPN-201ENST00000242729 CARD19Q96LW7 228 aa12.15□□□□□ -0.46
SSPN-201ENST00000242729 TRAV13-1A0A0B4J241 112 aa12.14□□□□□ -0.47
SSPN-201ENST00000242729 MRPS36P82909 103 aaKnown RBP12.14□□□□□ -0.47
SSPN-201ENST00000242729 KRTAP1-3Q8IUG1 177 aa12.14□□□□□ -0.47
SSPN-201ENST00000242729 CITED2Q99967 270 aaPredicted RBP12.14□□□□□ -0.47
SSPN-201ENST00000242729 RPL35AP18077 110 aaKnown RBP12.14□□□□□ -0.47
SSPN-201ENST00000242729 C1orf158Q8N1D5 194 aa12.14□□□□□ -0.47
SSPN-201ENST00000242729 ANKRD29Q8N6D5 301 aa12.14□□□□□ -0.47
SSPN-201ENST00000242729 PDZD2O15018 2839 aa12.13□□□□□ -0.47
SSPN-201ENST00000242729 IGKV3OR2-268A0A0C4DH90 116 aa12.12□□□□□ -0.47
SSPN-201ENST00000242729 GAGE12JA6NER3 117 aa12.12□□□□□ -0.47
SSPN-201ENST00000242729 GAGE4Q13068 117 aa12.12□□□□□ -0.47
SSPN-201ENST00000242729 GAGE5Q13069 117 aa12.12□□□□□ -0.47
SSPN-201ENST00000242729 LITAFQ99732 161 aa12.12□□□□□ -0.47
SSPN-201ENST00000242729 NOP10Q9NPE3 64 aaKnown RBP12.12□□□□□ -0.47
SSPN-201ENST00000242729 IGHV1-58A0A0C4DH39 117 aa12.12□□□□□ -0.47
SSPN-201ENST00000242729 CCL24O00175 119 aa12.12□□□□□ -0.47
SSPN-201ENST00000242729 VSIG2Q96IQ7 327 aa12.12□□□□□ -0.47
SSPN-201ENST00000242729 Q8N2B8 174 aa12.11□□□□□ -0.47
SSPN-201ENST00000242729 PYGO1Q9Y3Y4 419 aa12.11□□□□□ -0.47
SSPN-201ENST00000242729 CIDEAO60543 219 aa12.11□□□□□ -0.47
SSPN-201ENST00000242729 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
SSPN-201ENST00000242729 UNC79Q9P2D8 2635 aa12.1□□□□□ -0.47
SSPN-201ENST00000242729 TRIAP1O43715 76 aa12.1□□□□□ -0.47
SSPN-201ENST00000242729 SLC25A20O43772 301 aa12.1□□□□□ -0.47
SSPN-201ENST00000242729 MT-ATP8P03928 68 aa12.09□□□□□ -0.47
SSPN-201ENST00000242729 SPATA25Q9BR10 227 aa12.09□□□□□ -0.47
SSPN-201ENST00000242729 CDIP1Q9H305 208 aa12.09□□□□□ -0.47
SSPN-201ENST00000242729 TEN1Q86WV5 123 aa12.08□□□□□ -0.48
SSPN-201ENST00000242729 CLEC2BQ92478 149 aa12.08□□□□□ -0.48
SSPN-201ENST00000242729 LYRM7Q5U5X0 104 aa12.08□□□□□ -0.48
SSPN-201ENST00000242729 A8MTW9 85 aa12.07□□□□□ -0.48
SSPN-201ENST00000242729 GAGE7O76087 117 aa12.07□□□□□ -0.48
SSPN-201ENST00000242729 GAGE12FP0CL80 117 aa12.07□□□□□ -0.48
SSPN-201ENST00000242729 GAGE12GP0CL81 117 aa12.07□□□□□ -0.48
SSPN-201ENST00000242729 GAGE12IP0CL82 117 aa12.07□□□□□ -0.48
SSPN-201ENST00000242729 TMEM101Q96IK0 257 aa12.07□□□□□ -0.48
SSPN-201ENST00000242729 TINCRA0A1B0GVN0 87 aa12.07□□□□□ -0.48
SSPN-201ENST00000242729 RS1O15537 224 aa12.07□□□□□ -0.48
SSPN-201ENST00000242729 SPANXA1Q9NS26 97 aa12.07□□□□□ -0.48
SSPN-201ENST00000242729 TRBV20-1A0A075B6N2 111 aa12.07□□□□□ -0.48
SSPN-201ENST00000242729 XGP55808 180 aa12.07□□□□□ -0.48
SSPN-201ENST00000242729 NTM-AS1Q6ZSK4 140 aa12.07□□□□□ -0.48
SSPN-201ENST00000242729 Q9H8V8 135 aa12.06□□□□□ -0.48
SSPN-201ENST00000242729 NTN5Q8WTR8 489 aaPredicted RBP12.05□□□□□ -0.48
SSPN-201ENST00000242729 BEAN1Q3B7T3 259 aa12.05□□□□□ -0.48
SSPN-201ENST00000242729 PPDPFLQ8WWR9 84 aa12.05□□□□□ -0.48
SSPN-201ENST00000242729 TENM1Q9UKZ4 2725 aa12.04□□□□□ -0.48
SSPN-201ENST00000242729 TRGV2A0A075B6R0 118 aa12.04□□□□□ -0.48
SSPN-201ENST00000242729 A0A0B4J2C4 111 aa12.04□□□□□ -0.48
SSPN-201ENST00000242729 TEX49A0A1B0GTD5 131 aa12.04□□□□□ -0.48
SSPN-201ENST00000242729 YAE1D1Q9NRH1 226 aa12.04□□□□□ -0.48
SSPN-201ENST00000242729 LINC00242Q5T6M2 205 aa12.04□□□□□ -0.48
SSPN-201ENST00000242729 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.03□□□□□ -0.48
SSPN-201ENST00000242729 MIAQ16674 131 aa12.03□□□□□ -0.48
SSPN-201ENST00000242729 EDA2RQ9HAV5 297 aa12.03□□□□□ -0.48
SSPN-201ENST00000242729 RPL13AP40429 203 aaKnown RBP12.02□□□□□ -0.49
SSPN-201ENST00000242729 SMR3AQ99954 134 aa12.02□□□□□ -0.49
SSPN-201ENST00000242729 ICOSQ9Y6W8 199 aa12.02□□□□□ -0.49
SSPN-201ENST00000242729 ANK3Q12955 4377 aaKnown RBP12.02□□□□□ -0.49
SSPN-201ENST00000242729 RPL36AP83881 106 aaKnown RBP12.01□□□□□ -0.49
SSPN-201ENST00000242729 LINC01620Q4KN68 170 aa12.01□□□□□ -0.49
SSPN-201ENST00000242729 LINC01006Q8NI28 216 aa12.01□□□□□ -0.49
SSPN-201ENST00000242729 RPL36ALQ969Q0 106 aaKnown RBP12.01□□□□□ -0.49
SSPN-201ENST00000242729 K7EQD1 137 aa12.01□□□□□ -0.49
SSPN-201ENST00000242729 GIG44P09565 113 aaPredicted RBP12.01□□□□□ -0.49
SSPN-201ENST00000242729 ZFAND6Q6FIF0 208 aa12.01□□□□□ -0.49
SSPN-201ENST00000242729 OTOGQ6ZRI0 2925 aa12□□□□□ -0.49
SSPN-201ENST00000242729 ATP6V0E2Q8NHE4 81 aa12□□□□□ -0.49
SSPN-201ENST00000242729 DNAJC30Q96LL9 226 aa12□□□□□ -0.49
SSPN-201ENST00000242729 ATXN8Q156A1 80 aa11.99□□□□□ -0.49
SSPN-201ENST00000242729 GAGE6Q13070 117 aa11.99□□□□□ -0.49
SSPN-201ENST00000242729 MEIG1Q5JSS6 88 aa11.99□□□□□ -0.49
SSPN-201ENST00000242729 TOMM7Q9P0U1 55 aa11.99□□□□□ -0.49
SSPN-201ENST00000242729 PRIMA1Q86XR5 153 aa11.98□□□□□ -0.49
SSPN-201ENST00000242729 LRRC75A-AS1Q8N1F1 130 aa11.98□□□□□ -0.49
SSPN-201ENST00000242729 SBSPONQ8IVN8 264 aa11.97□□□□□ -0.49
SSPN-201ENST00000242729 UBE2L6O14933 153 aa11.97□□□□□ -0.49
SSPN-201ENST00000242729 DEFB130BP0DP73 79 aa11.97□□□□□ -0.49
SSPN-201ENST00000242729 DEFB130AP0DP74 79 aa11.97□□□□□ -0.49
SSPN-201ENST00000242729 PIK3CD-AS1Q5SR53 167 aa11.97□□□□□ -0.49
SSPN-201ENST00000242729 SMIM1B2RUZ4 78 aa11.96□□□□□ -0.49
SSPN-201ENST00000242729 SOSTDC1Q6X4U4 206 aa11.96□□□□□ -0.49
SSPN-201ENST00000242729 SPANXDQ9BXN6 97 aa11.96□□□□□ -0.49
SSPN-201ENST00000242729 SPANXCQ9NY87 97 aa11.96□□□□□ -0.49
SSPN-201ENST00000242729 CRYBA4P53673 196 aa11.96□□□□□ -0.49
SSPN-201ENST00000242729 C2orf82Q6UX34 121 aa11.96□□□□□ -0.49
SSPN-201ENST00000242729 ATRQ13535 2644 aa11.96□□□□□ -0.49
SSPN-201ENST00000242729 A0A096LPF7 62 aa11.96□□□□□ -0.5
SSPN-201ENST00000242729 TRGV4A0A0C4DH28 118 aa11.96□□□□□ -0.5
SSPN-201ENST00000242729 C11orf68Q9H3H3 251 aaKnown RBP11.96□□□□□ -0.5
SSPN-201ENST00000242729 CKS1BP61024 79 aa11.95□□□□□ -0.5
SSPN-201ENST00000242729 TRBV30A0A0K0K1B3 111 aa11.95□□□□□ -0.5
SSPN-201ENST00000242729 H7C423 109 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms