RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 FXYD2P54710 66 aa16.47■□□□□ 0.23
MSX2-201ENST00000239243 RNASE13Q5GAN3 156 aaKnown RBP16.47■□□□□ 0.23
MSX2-201ENST00000239243 LYRM9A8MSI8 78 aa16.47■□□□□ 0.23
MSX2-201ENST00000239243 KRTAP24-1Q3LI83 254 aa16.47■□□□□ 0.23
MSX2-201ENST00000239243 PLEKHB2Q96CS7 222 aa16.47■□□□□ 0.23
MSX2-201ENST00000239243 DEFB135Q30KP9 77 aa16.46■□□□□ 0.23
MSX2-201ENST00000239243 SBSPONQ8IVN8 264 aa16.46■□□□□ 0.23
MSX2-201ENST00000239243 TMEM243Q9BU79 118 aa16.46■□□□□ 0.23
MSX2-201ENST00000239243 H7C423 109 aa16.45■□□□□ 0.22
MSX2-201ENST00000239243 SMIM13P0DJ93 91 aa16.45■□□□□ 0.22
MSX2-201ENST00000239243 UBE2L6O14933 153 aa16.45■□□□□ 0.22
MSX2-201ENST00000239243 TSPEAR-AS2P59090 65 aa16.45■□□□□ 0.22
MSX2-201ENST00000239243 VAMP3Q15836 100 aa16.45■□□□□ 0.22
MSX2-201ENST00000239243 LOC100131303A0A0U1RQF7 123 aa16.44■□□□□ 0.22
MSX2-201ENST00000239243 UBE2D1P51668 147 aa16.44■□□□□ 0.22
MSX2-201ENST00000239243 GEMIN7Q9H840 131 aaKnown RBP16.43■□□□□ 0.22
MSX2-201ENST00000239243 C9orf118A6NHY6 69 aa16.43■□□□□ 0.22
MSX2-201ENST00000239243 LINC00694P0DN24 101 aa16.43■□□□□ 0.22
MSX2-201ENST00000239243 UBE2V1Q13404 147 aa16.42■□□□□ 0.22
MSX2-201ENST00000239243 TIRAPP58753 221 aa16.42■□□□□ 0.22
MSX2-201ENST00000239243 AMMECR1LQ6DCA0 310 aa16.42■□□□□ 0.22
MSX2-201ENST00000239243 OR5A1Q8NGJ0 315 aa16.42■□□□□ 0.22
MSX2-201ENST00000239243 FAM222AQ5U5X8 452 aa16.41■□□□□ 0.22
MSX2-201ENST00000239243 TMEM101Q96IK0 257 aa16.41■□□□□ 0.22
MSX2-201ENST00000239243 A0A0J9YY99 117 aa16.41■□□□□ 0.22
MSX2-201ENST00000239243 IGHV4-30-4P0DP06 118 aa16.41■□□□□ 0.22
MSX2-201ENST00000239243 MIFP14174 115 aa16.41■□□□□ 0.22
MSX2-201ENST00000239243 C3orf56Q8N813 242 aa16.41■□□□□ 0.22
MSX2-201ENST00000239243 K7EP13 123 aa16.4■□□□□ 0.22
MSX2-201ENST00000239243 SRSF9Q13242 221 aaKnown RBP eCLIP16.4■□□□□ 0.22
MSX2-201ENST00000239243 SPANXB1Q9NS25 103 aaPredicted RBP16.4■□□□□ 0.22
MSX2-201ENST00000239243 NHP2Q9NX24 153 aaKnown RBP16.4■□□□□ 0.22
MSX2-201ENST00000239243 SHISA2Q6UWI4 295 aa16.39■□□□□ 0.22
MSX2-201ENST00000239243 IGHV1-58A0A0C4DH39 117 aa16.39■□□□□ 0.21
MSX2-201ENST00000239243 IGHV3-30-3P0DP02 117 aa16.39■□□□□ 0.21
MSX2-201ENST00000239243 FAM19A3Q7Z5A8 133 aa16.39■□□□□ 0.21
MSX2-201ENST00000239243 PRO0255Q9UI72 69 aa16.39■□□□□ 0.21
MSX2-201ENST00000239243 IGHV3-64A0A075B6Q5 118 aa16.38■□□□□ 0.21
MSX2-201ENST00000239243 TMEM238LA0A1B0GVL6 79 aa16.38■□□□□ 0.21
MSX2-201ENST00000239243 A6NJY4 79 aa16.38■□□□□ 0.21
MSX2-201ENST00000239243 HERVK_113P63121 156 aa16.38■□□□□ 0.21
MSX2-201ENST00000239243 RAB37Q96AX2 223 aa16.38■□□□□ 0.21
MSX2-201ENST00000239243 CDC42SE2Q9NRR3 84 aa16.38■□□□□ 0.21
MSX2-201ENST00000239243 IGLV5-45A0A087WSX0 123 aa16.38■□□□□ 0.21
MSX2-201ENST00000239243 TRBV6-8A0A0A6YYG3 113 aa16.38■□□□□ 0.21
MSX2-201ENST00000239243 IGHV4-28A0A0C4DH34 117 aa16.38■□□□□ 0.21
MSX2-201ENST00000239243 RNF183Q96D59 192 aa16.37■□□□□ 0.21
MSX2-201ENST00000239243 H3BUT2 72 aa16.35■□□□□ 0.21
MSX2-201ENST00000239243 VSIG2Q96IQ7 327 aa16.35■□□□□ 0.21
MSX2-201ENST00000239243 GYPEP15421 78 aa16.34■□□□□ 0.21
MSX2-201ENST00000239243 Q8NAQ8 132 aa16.34■□□□□ 0.21
MSX2-201ENST00000239243 CCL25O15444 150 aa16.34■□□□□ 0.21
MSX2-201ENST00000239243 ATP6V0E2Q8NHE4 81 aa16.34■□□□□ 0.21
MSX2-201ENST00000239243 TRAV8-3A0A0A6YYJ7 113 aa16.33■□□□□ 0.2
MSX2-201ENST00000239243 C12orf74Q32Q52 190 aa16.33■□□□□ 0.2
MSX2-201ENST00000239243 LINC00242Q5T6M2 205 aa16.33■□□□□ 0.2
MSX2-201ENST00000239243 CDKN2A-AS1Q9UH64 79 aa16.33■□□□□ 0.2
MSX2-201ENST00000239243 A0A1B0GWB2 263 aa16.33■□□□□ 0.2
MSX2-201ENST00000239243 DAD1P61803 113 aa16.33■□□□□ 0.2
MSX2-201ENST00000239243 OXLD1Q5BKU9 147 aa16.33■□□□□ 0.2
MSX2-201ENST00000239243 K7ERJ3 54 aa16.32■□□□□ 0.2
MSX2-201ENST00000239243 SPINK8P0C7L1 97 aa16.32■□□□□ 0.2
MSX2-201ENST00000239243 CHCHD5Q9BSY4 110 aa16.31■□□□□ 0.2
MSX2-201ENST00000239243 TRAV13-1A0A0B4J241 112 aa16.3■□□□□ 0.2
MSX2-201ENST00000239243 TMEM238C9JI98 176 aa16.3■□□□□ 0.2
MSX2-201ENST00000239243 DEFB4AO15263 64 aa16.3■□□□□ 0.2
MSX2-201ENST00000239243 PAX4O43316 350 aa16.3■□□□□ 0.2
MSX2-201ENST00000239243 EGFEM1PQ0D2K5 195 aa16.3■□□□□ 0.2
MSX2-201ENST00000239243 A0A1W2PPM0 123 aa16.3■□□□□ 0.2
MSX2-201ENST00000239243 SPART-AS1P0CW21 52 aa16.3■□□□□ 0.2
MSX2-201ENST00000239243 GAGE6Q13070 117 aa16.3■□□□□ 0.2
MSX2-201ENST00000239243 GTF2H5Q6ZYL4 71 aa16.3■□□□□ 0.2
MSX2-201ENST00000239243 SAMD5Q5TGI4 173 aa16.29■□□□□ 0.2
MSX2-201ENST00000239243 NDUFA12Q9UI09 145 aa16.29■□□□□ 0.2
MSX2-201ENST00000239243 IGHV3-30P01768 117 aa16.29■□□□□ 0.2
MSX2-201ENST00000239243 ATP5G1P05496 136 aa16.29■□□□□ 0.2
MSX2-201ENST00000239243 IGHV3-30-5P0DP03 117 aa16.29■□□□□ 0.2
MSX2-201ENST00000239243 C10orf126Q8N4M7 172 aa16.29■□□□□ 0.2
MSX2-201ENST00000239243 GAGE10A6NGK3 116 aa16.28■□□□□ 0.2
MSX2-201ENST00000239243 A8MZ25 164 aa16.28■□□□□ 0.2
MSX2-201ENST00000239243 COX6A2Q02221 97 aa16.28■□□□□ 0.2
MSX2-201ENST00000239243 ZFAND6Q6FIF0 208 aa16.28■□□□□ 0.2
MSX2-201ENST00000239243 A0A0J9YXY3 114 aa16.27■□□□□ 0.2
MSX2-201ENST00000239243 FABP2P12104 132 aa16.27■□□□□ 0.2
MSX2-201ENST00000239243 NAA38Q9BRA0 125 aaKnown RBP16.27■□□□□ 0.19
MSX2-201ENST00000239243 TEX48A0A1B0GUV7 120 aa16.26■□□□□ 0.19
MSX2-201ENST00000239243 KRTAP10-11P60412 298 aa16.26■□□□□ 0.19
MSX2-201ENST00000239243 IGLV5-39A0A0G2JS06 123 aa16.25■□□□□ 0.19
MSX2-201ENST00000239243 TRRAPQ9Y4A5 3859 aa16.25■□□□□ 0.19
MSX2-201ENST00000239243 PRIMA1Q86XR5 153 aa16.25■□□□□ 0.19
MSX2-201ENST00000239243 CELA1Q9UNI1 258 aa16.25■□□□□ 0.19
MSX2-201ENST00000239243 IGLL5B9A064 214 aa16.24■□□□□ 0.19
MSX2-201ENST00000239243 K7EP34 96 aa16.24■□□□□ 0.19
MSX2-201ENST00000239243 SPCS1Q9Y6A9 102 aa16.22■□□□□ 0.19
MSX2-201ENST00000239243 RPL24P83731 157 aaKnown RBP16.22■□□□□ 0.19
MSX2-201ENST00000239243 IGLV4-60A0A075B6I1 120 aa16.21■□□□□ 0.19
MSX2-201ENST00000239243 TRAV26-1A0A087WT03 109 aa16.21■□□□□ 0.19
MSX2-201ENST00000239243 SMIM1B2RUZ4 78 aa16.21■□□□□ 0.19
MSX2-201ENST00000239243 NDUFA1O15239 70 aa16.21■□□□□ 0.19
MSX2-201ENST00000239243 NBEAL2Q6ZNJ1 2754 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms