RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 TSPEAR-AS2P59090 65 aa10.77□□□□□ -0.69
PAF1-201ENST00000221265 NFE4Q86UQ8 179 aa10.77□□□□□ -0.69
PAF1-201ENST00000221265 SCGB1D4Q6XE38 83 aa10.77□□□□□ -0.69
PAF1-201ENST00000221265 IGLV4-3A0A075B6K6 122 aa10.76□□□□□ -0.69
PAF1-201ENST00000221265 DNHD1Q96M86 4753 aa10.75□□□□□ -0.69
PAF1-201ENST00000221265 RNF183Q96D59 192 aa10.75□□□□□ -0.69
PAF1-201ENST00000221265 TRGV2A0A075B6R0 118 aa10.75□□□□□ -0.69
PAF1-201ENST00000221265 SMIM9A6NGZ8 99 aa10.75□□□□□ -0.69
PAF1-201ENST00000221265 RHODO00212 210 aa10.75□□□□□ -0.69
PAF1-201ENST00000221265 RNF151Q2KHN1 245 aa10.75□□□□□ -0.69
PAF1-201ENST00000221265 FAM104AQ969W3 186 aa10.75□□□□□ -0.69
PAF1-201ENST00000221265 RETNQ9HD89 108 aa10.75□□□□□ -0.69
PAF1-201ENST00000221265 TNFRSF18Q9Y5U5 241 aa10.75□□□□□ -0.69
PAF1-201ENST00000221265 TRAV4A0A0B4J268 109 aa10.74□□□□□ -0.69
PAF1-201ENST00000221265 IGHV4-28A0A0C4DH34 117 aa10.74□□□□□ -0.69
PAF1-201ENST00000221265 A0A0J9YY99 117 aa10.74□□□□□ -0.69
PAF1-201ENST00000221265 A8MZ25 164 aa10.74□□□□□ -0.69
PAF1-201ENST00000221265 AMELXQ99217 191 aa10.74□□□□□ -0.69
PAF1-201ENST00000221265 DEFB130BP0DP73 79 aa10.73□□□□□ -0.69
PAF1-201ENST00000221265 DEFB130AP0DP74 79 aa10.73□□□□□ -0.69
PAF1-201ENST00000221265 Q8NAQ8 132 aa10.73□□□□□ -0.69
PAF1-201ENST00000221265 VCX2Q9H322 139 aa10.73□□□□□ -0.69
PAF1-201ENST00000221265 TMEM223A0PJW6 202 aa10.73□□□□□ -0.69
PAF1-201ENST00000221265 ZNF22P17026 224 aaPredicted RBP10.73□□□□□ -0.69
PAF1-201ENST00000221265 SRSF9Q13242 221 aaKnown RBP eCLIP10.73□□□□□ -0.69
PAF1-201ENST00000221265 PYGO1Q9Y3Y4 419 aa10.73□□□□□ -0.69
PAF1-201ENST00000221265 A0A0J9YXV3 536 aa10.72□□□□□ -0.69
PAF1-201ENST00000221265 J3QQQ9 107 aa10.72□□□□□ -0.69
PAF1-201ENST00000221265 FAM222AQ5U5X8 452 aa10.72□□□□□ -0.69
PAF1-201ENST00000221265 CHCHD7Q9BUK0 85 aa10.72□□□□□ -0.69
PAF1-201ENST00000221265 LEPROTO15243 131 aa10.71□□□□□ -0.69
PAF1-201ENST00000221265 CEMP1Q6PRD7 247 aaPredicted RBP10.71□□□□□ -0.69
PAF1-201ENST00000221265 K7ERU9 68 aa10.7□□□□□ -0.7
PAF1-201ENST00000221265 UBE2D1P51668 147 aa10.7□□□□□ -0.7
PAF1-201ENST00000221265 LINC00612Q8N6U2 182 aa10.7□□□□□ -0.7
PAF1-201ENST00000221265 SLC25A29Q8N8R3 303 aa10.7□□□□□ -0.7
PAF1-201ENST00000221265 SPANXB1Q9NS25 103 aaPredicted RBP10.7□□□□□ -0.7
PAF1-201ENST00000221265 CELA1Q9UNI1 258 aa10.7□□□□□ -0.7
PAF1-201ENST00000221265 LGALS3P17931 250 aaKnown RBP10.7□□□□□ -0.7
PAF1-201ENST00000221265 TMEM238LA0A1B0GVL6 79 aa10.69□□□□□ -0.7
PAF1-201ENST00000221265 A6NJY4 79 aa10.69□□□□□ -0.7
PAF1-201ENST00000221265 K7EIL1 84 aa10.69□□□□□ -0.7
PAF1-201ENST00000221265 MIFP14174 115 aa10.69□□□□□ -0.7
PAF1-201ENST00000221265 IGHV3-30P01768 117 aa10.69□□□□□ -0.7
PAF1-201ENST00000221265 IGHV3-30-5P0DP03 117 aa10.69□□□□□ -0.7
PAF1-201ENST00000221265 DNAJC30Q96LL9 226 aa10.69□□□□□ -0.7
PAF1-201ENST00000221265 COL7A1Q02388 2944 aa10.68□□□□□ -0.7
PAF1-201ENST00000221265 IGHV3-64A0A075B6Q5 118 aa10.68□□□□□ -0.7
PAF1-201ENST00000221265 IGHV3-38A0A0C4DH36 116 aa10.68□□□□□ -0.7
PAF1-201ENST00000221265 K7EQD1 137 aa10.68□□□□□ -0.7
PAF1-201ENST00000221265 CRYBA4P53673 196 aa10.68□□□□□ -0.7
PAF1-201ENST00000221265 FHL2Q14192 279 aa10.68□□□□□ -0.7
PAF1-201ENST00000221265 LOC100131303A0A0U1RQF7 123 aa10.67□□□□□ -0.7
PAF1-201ENST00000221265 MRPS36P82909 103 aaKnown RBP10.67□□□□□ -0.7
PAF1-201ENST00000221265 RNASE13Q5GAN3 156 aaKnown RBP10.67□□□□□ -0.7
PAF1-201ENST00000221265 KPRPQ5T749 579 aaPredicted RBP10.67□□□□□ -0.7
PAF1-201ENST00000221265 PGPEP1Q9NXJ5 209 aa10.67□□□□□ -0.7
PAF1-201ENST00000221265 UBE2D4Q9Y2X8 147 aa10.67□□□□□ -0.7
PAF1-201ENST00000221265 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.67□□□□□ -0.7
PAF1-201ENST00000221265 TRGV4A0A0C4DH28 118 aa10.67□□□□□ -0.7
PAF1-201ENST00000221265 IGKV2-29A2NJV5 120 aaPredicted RBP10.67□□□□□ -0.7
PAF1-201ENST00000221265 HUWE1Q7Z6Z7 4374 aaKnown RBP10.67□□□□□ -0.7
PAF1-201ENST00000221265 LYRM9A8MSI8 78 aa10.66□□□□□ -0.7
PAF1-201ENST00000221265 H3BMG7 143 aa10.66□□□□□ -0.7
PAF1-201ENST00000221265 SBSPONQ8IVN8 264 aa10.66□□□□□ -0.7
PAF1-201ENST00000221265 VPS25Q9BRG1 176 aa10.66□□□□□ -0.7
PAF1-201ENST00000221265 SPANXA1Q9NS26 97 aa10.66□□□□□ -0.7
PAF1-201ENST00000221265 APOMO95445 188 aa10.65□□□□□ -0.7
PAF1-201ENST00000221265 COTL1Q14019 142 aa10.65□□□□□ -0.7
PAF1-201ENST00000221265 GAGE12JA6NER3 117 aa10.64□□□□□ -0.71
PAF1-201ENST00000221265 TSPAN13O95857 204 aa10.64□□□□□ -0.71
PAF1-201ENST00000221265 GAGE4Q13068 117 aa10.64□□□□□ -0.71
PAF1-201ENST00000221265 GAGE5Q13069 117 aa10.64□□□□□ -0.71
PAF1-201ENST00000221265 GAGE13Q4V321 117 aa10.64□□□□□ -0.71
PAF1-201ENST00000221265 F8W1H4 67 aa10.64□□□□□ -0.71
PAF1-201ENST00000221265 CFC1BP0CG36 223 aa10.64□□□□□ -0.71
PAF1-201ENST00000221265 CFC1P0CG37 223 aa10.64□□□□□ -0.71
PAF1-201ENST00000221265 WFDC2Q14508 124 aa10.64□□□□□ -0.71
PAF1-201ENST00000221265 DEFB121Q5J5C9 76 aa10.64□□□□□ -0.71
PAF1-201ENST00000221265 Q6ZUT4 128 aa10.64□□□□□ -0.71
PAF1-201ENST00000221265 TRBV6-4A0A1B0GX49 114 aa10.63□□□□□ -0.71
PAF1-201ENST00000221265 IGHV3-30-3P0DP02 117 aa10.63□□□□□ -0.71
PAF1-201ENST00000221265 DAD1P61803 113 aa10.63□□□□□ -0.71
PAF1-201ENST00000221265 C10orf126Q8N4M7 172 aa10.63□□□□□ -0.71
PAF1-201ENST00000221265 MRAPQ8TCY5 172 aa10.63□□□□□ -0.71
PAF1-201ENST00000221265 TRBV10-1A0A0K0K1A3 114 aa10.62□□□□□ -0.71
PAF1-201ENST00000221265 TINCRA0A1B0GVN0 87 aa10.62□□□□□ -0.71
PAF1-201ENST00000221265 PCP4P48539 62 aa10.62□□□□□ -0.71
PAF1-201ENST00000221265 TRAV8-3A0A0A6YYJ7 113 aa10.62□□□□□ -0.71
PAF1-201ENST00000221265 CIDEAO60543 219 aa10.62□□□□□ -0.71
PAF1-201ENST00000221265 RPL24P83731 157 aaKnown RBP10.62□□□□□ -0.71
PAF1-201ENST00000221265 RPL36AP83881 106 aaKnown RBP10.62□□□□□ -0.71
PAF1-201ENST00000221265 RPL36ALQ969Q0 106 aaKnown RBP10.62□□□□□ -0.71
PAF1-201ENST00000221265 TIMM21Q9BVV7 248 aa10.62□□□□□ -0.71
PAF1-201ENST00000221265 PRO0461Q9UI25 63 aa10.62□□□□□ -0.71
PAF1-201ENST00000221265 SPART-AS1P0CW21 52 aa10.61□□□□□ -0.71
PAF1-201ENST00000221265 UBE2D3P61077 147 aa10.61□□□□□ -0.71
PAF1-201ENST00000221265 UBE2D2P62837 147 aa10.61□□□□□ -0.71
PAF1-201ENST00000221265 DNAH9Q9NYC9 4486 aa10.61□□□□□ -0.71
PAF1-201ENST00000221265 A0A0J9YXY3 114 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms