RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 BPY2O14599 106 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 Q8N6K4 173 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 PIEZO2Q9H5I5 2752 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 RS1O15537 224 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 ZFP36P26651 326 aaKnown RBP3.31□□□□□ -1.88
CHD9-201ENST00000219084 ASPHD1Q5U4P2 390 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 LINC00322Q6ZN03 302 aaPredicted RBP3.31□□□□□ -1.88
CHD9-201ENST00000219084 PRRC2CQ9Y520 2896 aaKnown RBP3.31□□□□□ -1.88
CHD9-201ENST00000219084 NDUFS5O43920 106 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 SEC61GP60059 68 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 Q6JHZ5 121 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 C9orf85Q96MD7 179 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 C14orf132Q9NPU4 83 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 PTPN13Q12923 2485 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 MT-ATP8P03928 68 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 ZNF80P51504 273 aaPredicted RBP3.31□□□□□ -1.88
CHD9-201ENST00000219084 CLPSL1A2RUU4 121 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 COX7CP15954 63 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 DEFB121Q5J5C9 76 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 BLCAPP62952 87 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 Q6ZQT7 251 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 LINC01561Q8N1V8 128 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 MIFP14174 115 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 Q6YL49 198 aa3.31□□□□□ -1.88
CHD9-201ENST00000219084 CSDC2Q9Y534 153 aaKnown RBP3.31□□□□□ -1.88
CHD9-201ENST00000219084 IGHV4-30-2A0A087WSY4 118 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 CLPSL2Q6UWE3 100 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 APRG1Q8IVJ8 170 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 FAM110AQ9BQ89 295 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 LINC00467Q9BRT7 94 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 KLK5Q9Y337 293 aaPredicted RBP3.3□□□□□ -1.88
CHD9-201ENST00000219084 CRIP2P52943 208 aaPredicted RBP3.3□□□□□ -1.88
CHD9-201ENST00000219084 UNQ9165/PRO28630Q6UXU0 137 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 PSMG3-AS1Q96PY0 264 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 CRIP1P50238 77 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 TRBV6-8A0A0A6YYG3 113 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 REG3AQ06141 175 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 ZNF706Q9Y5V0 76 aaPredicted RBP3.3□□□□□ -1.88
CHD9-201ENST00000219084 A0A087X002 238 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 UBE2AP49459 152 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 SPRY2O43597 315 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 TSHBP01222 138 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 UBE2D3P61077 147 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 UBE2D2P62837 147 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 CD164L2Q6UWJ8 174 aa3.3□□□□□ -1.88
CHD9-201ENST00000219084 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.3□□□□□ -1.88
CHD9-201ENST00000219084 POLR2KP53803 58 aaKnown RBP3.29□□□□□ -1.88
CHD9-201ENST00000219084 TTC28Q96AY4 2481 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 CEP295Q9C0D2 2601 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 NCR3O14931 201 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 LMO4P61968 165 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 DEFB136Q30KP8 78 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 C11orf71Q6IPW1 123 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 Q8IZM0 81 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 CHCHD7Q9BUK0 85 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 UBE2D1P51668 147 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 DEFB105AQ8NG35 78 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 ABCA2Q9BZC7 2435 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 DEFB114Q30KQ6 69 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 TRAV23DV6A0A075B6W5 121 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 FRMD6-AS1P0C7T7 363 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 FAM19A3Q7Z5A8 133 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 C20orf173Q96LM9 149 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 LINC00474Q9P2X8 69 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 UBE2D4Q9Y2X8 147 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 SMAD5-AS1Q9Y6J3 95 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 SERP1Q9Y6X1 66 aa3.29□□□□□ -1.88
CHD9-201ENST00000219084 IGLV1-40P01703 118 aa3.28□□□□□ -1.88
CHD9-201ENST00000219084 NOTCH2Q04721 2471 aa3.28□□□□□ -1.88
CHD9-201ENST00000219084 A0A1B0GW54 56 aa3.28□□□□□ -1.88
CHD9-201ENST00000219084 CHCHD10Q8WYQ3 142 aaPredicted RBP3.28□□□□□ -1.88
CHD9-201ENST00000219084 LINC01548A6NM66 108 aa3.28□□□□□ -1.88
CHD9-201ENST00000219084 PPDPFQ9H3Y8 114 aa3.28□□□□□ -1.88
CHD9-201ENST00000219084 CDKN2A-AS1Q9UH64 79 aa3.28□□□□□ -1.88
CHD9-201ENST00000219084 TRAV7A0A075B6U4 112 aa3.28□□□□□ -1.88
CHD9-201ENST00000219084 C4orf48Q5BLP8 95 aa3.28□□□□□ -1.88
CHD9-201ENST00000219084 IGIPA6NJ69 53 aa3.28□□□□□ -1.88
CHD9-201ENST00000219084 M0R378 163 aa3.28□□□□□ -1.88
CHD9-201ENST00000219084 CCKP06307 115 aa3.28□□□□□ -1.88
CHD9-201ENST00000219084 SDIM1Q6ZPB5 146 aa3.28□□□□□ -1.88
CHD9-201ENST00000219084 Q8NA96 180 aa3.28□□□□□ -1.88
CHD9-201ENST00000219084 IGKV2D-26A0A0A0MRZ7 120 aa3.27□□□□□ -1.89
CHD9-201ENST00000219084 DNAJC9-AS1A6NH13 148 aa3.27□□□□□ -1.89
CHD9-201ENST00000219084 RNASE3P12724 160 aaKnown RBP3.27□□□□□ -1.89
CHD9-201ENST00000219084 GRNP28799 593 aaKnown RBP3.27□□□□□ -1.89
CHD9-201ENST00000219084 RPL28P46779 137 aaKnown RBP3.27□□□□□ -1.89
CHD9-201ENST00000219084 USP9XQ93008 2570 aaPredicted RBP3.27□□□□□ -1.89
CHD9-201ENST00000219084 ZNF462Q96JM2 2506 aa3.27□□□□□ -1.89
CHD9-201ENST00000219084 UTP20O75691 2785 aaKnown RBP3.27□□□□□ -1.89
CHD9-201ENST00000219084 MSMPQ1L6U9 139 aa3.27□□□□□ -1.89
CHD9-201ENST00000219084 Q8N976 141 aa3.27□□□□□ -1.89
CHD9-201ENST00000219084 LINC00526Q96FQ7 95 aa3.27□□□□□ -1.89
CHD9-201ENST00000219084 IGLV10-54A0A075B6I4 117 aa3.27□□□□□ -1.89
CHD9-201ENST00000219084 F8W735 103 aaPredicted RBP3.27□□□□□ -1.89
CHD9-201ENST00000219084 MAPKAPK5-AS1Q8N8E1 139 aa3.27□□□□□ -1.89
CHD9-201ENST00000219084 DCANP1Q8TF63 244 aa3.27□□□□□ -1.89
CHD9-201ENST00000219084 BRK1Q8WUW1 75 aa3.27□□□□□ -1.89
CHD9-201ENST00000219084 MRPS12O15235 138 aaKnown RBP3.27□□□□□ -1.89
CHD9-201ENST00000219084 BCE1O60756 84 aa3.27□□□□□ -1.89
CHD9-201ENST00000219084 A0A1W2PNU3 283 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms