RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 LYRM9A8MSI8 78 aa12.15□□□□□ -0.46
RABGGTA-201ENST00000216840 TSPEAR-AS2P59090 65 aa12.15□□□□□ -0.46
RABGGTA-201ENST00000216840 FBN1P35555 2871 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-201ENST00000216840 IGHV4-28A0A0C4DH34 117 aa12.14□□□□□ -0.47
RABGGTA-201ENST00000216840 KRTAP10-11P60412 298 aa12.14□□□□□ -0.47
RABGGTA-201ENST00000216840 DGAT2L7PQ6IED9 249 aa12.14□□□□□ -0.47
RABGGTA-201ENST00000216840 TINCRA0A1B0GVN0 87 aa12.13□□□□□ -0.47
RABGGTA-201ENST00000216840 DEFB4AO15263 64 aa12.13□□□□□ -0.47
RABGGTA-201ENST00000216840 A6NDN8 102 aa12.12□□□□□ -0.47
RABGGTA-201ENST00000216840 GCSHP23434 173 aa12.12□□□□□ -0.47
RABGGTA-201ENST00000216840 RNF183Q96D59 192 aa12.12□□□□□ -0.47
RABGGTA-201ENST00000216840 TMEM243Q9BU79 118 aa12.12□□□□□ -0.47
RABGGTA-201ENST00000216840 CSDC2Q9Y534 153 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-201ENST00000216840 LEPROTO15243 131 aa12.12□□□□□ -0.47
RABGGTA-201ENST00000216840 UBE2D1P51668 147 aa12.12□□□□□ -0.47
RABGGTA-201ENST00000216840 TAL2Q16559 108 aa12.12□□□□□ -0.47
RABGGTA-201ENST00000216840 CEND1Q8N111 149 aa12.12□□□□□ -0.47
RABGGTA-201ENST00000216840 Q8NAQ8 132 aa12.12□□□□□ -0.47
RABGGTA-201ENST00000216840 PLEKHB2Q96CS7 222 aa12.12□□□□□ -0.47
RABGGTA-201ENST00000216840 STAB1Q9NY15 2570 aa12.11□□□□□ -0.47
RABGGTA-201ENST00000216840 CMYA5Q8N3K9 4069 aa12.11□□□□□ -0.47
RABGGTA-201ENST00000216840 J3QQQ9 107 aa12.11□□□□□ -0.47
RABGGTA-201ENST00000216840 MIFP14174 115 aa12.11□□□□□ -0.47
RABGGTA-201ENST00000216840 FXYD2P54710 66 aa12.11□□□□□ -0.47
RABGGTA-201ENST00000216840 TM2D2Q9BX73 214 aa12.11□□□□□ -0.47
RABGGTA-201ENST00000216840 K7EP13 123 aa12.1□□□□□ -0.47
RABGGTA-201ENST00000216840 EGFEM1PQ0D2K5 195 aa12.1□□□□□ -0.47
RABGGTA-201ENST00000216840 IGHV3-64A0A075B6Q5 118 aa12.09□□□□□ -0.47
RABGGTA-201ENST00000216840 LGALS3P17931 250 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-201ENST00000216840 SMAGPQ0VAQ4 97 aa12.09□□□□□ -0.47
RABGGTA-201ENST00000216840 HIST1H4GQ99525 98 aa12.09□□□□□ -0.47
RABGGTA-201ENST00000216840 H7C423 109 aa12.09□□□□□ -0.47
RABGGTA-201ENST00000216840 UBE2L6O14933 153 aa12.09□□□□□ -0.47
RABGGTA-201ENST00000216840 GYPEP15421 78 aa12.09□□□□□ -0.47
RABGGTA-201ENST00000216840 SCGB1D4Q6XE38 83 aa12.09□□□□□ -0.47
RABGGTA-201ENST00000216840 PRO0255Q9UI72 69 aa12.09□□□□□ -0.47
RABGGTA-201ENST00000216840 OR5A1Q8NGJ0 315 aa12.08□□□□□ -0.48
RABGGTA-201ENST00000216840 CDC42SE2Q9NRR3 84 aa12.08□□□□□ -0.48
RABGGTA-201ENST00000216840 TRBV6-8A0A0A6YYG3 113 aa12.07□□□□□ -0.48
RABGGTA-201ENST00000216840 H3BRM9 83 aa12.07□□□□□ -0.48
RABGGTA-201ENST00000216840 TIRAPP58753 221 aa12.07□□□□□ -0.48
RABGGTA-201ENST00000216840 AMMECR1LQ6DCA0 310 aa12.07□□□□□ -0.48
RABGGTA-201ENST00000216840 CELA1Q9UNI1 258 aa12.07□□□□□ -0.48
RABGGTA-201ENST00000216840 GEMIN7Q9H840 131 aaKnown RBP12.07□□□□□ -0.48
RABGGTA-201ENST00000216840 A0A0J9YY99 117 aa12.06□□□□□ -0.48
RABGGTA-201ENST00000216840 PTTG1IPP53801 180 aa12.06□□□□□ -0.48
RABGGTA-201ENST00000216840 DAD1P61803 113 aa12.06□□□□□ -0.48
RABGGTA-201ENST00000216840 FAM19A3Q7Z5A8 133 aa12.06□□□□□ -0.48
RABGGTA-201ENST00000216840 IGLV5-45A0A087WSX0 123 aa12.06□□□□□ -0.48
RABGGTA-201ENST00000216840 TRAV8-3A0A0A6YYJ7 113 aa12.06□□□□□ -0.48
RABGGTA-201ENST00000216840 IGHV3-30-3P0DP02 117 aa12.06□□□□□ -0.48
RABGGTA-201ENST00000216840 ATP6V0E2Q8NHE4 81 aa12.06□□□□□ -0.48
RABGGTA-201ENST00000216840 TMEM101Q96IK0 257 aa12.06□□□□□ -0.48
RABGGTA-201ENST00000216840 IGHV1-58A0A0C4DH39 117 aa12.05□□□□□ -0.48
RABGGTA-201ENST00000216840 A8MZ25 164 aa12.05□□□□□ -0.48
RABGGTA-201ENST00000216840 COX6A2Q02221 97 aa12.05□□□□□ -0.48
RABGGTA-201ENST00000216840 GAGE6Q13070 117 aa12.05□□□□□ -0.48
RABGGTA-201ENST00000216840 LINC00242Q5T6M2 205 aa12.05□□□□□ -0.48
RABGGTA-201ENST00000216840 CDKN2A-AS1Q9UH64 79 aa12.04□□□□□ -0.48
RABGGTA-201ENST00000216840 PAX4O43316 350 aa12.04□□□□□ -0.48
RABGGTA-201ENST00000216840 SPINK8P0C7L1 97 aa12.04□□□□□ -0.48
RABGGTA-201ENST00000216840 SMIM13P0DJ93 91 aa12.04□□□□□ -0.48
RABGGTA-201ENST00000216840 VSIG2Q96IQ7 327 aa12.04□□□□□ -0.48
RABGGTA-201ENST00000216840 MAST4O15021 2626 aa12.03□□□□□ -0.48
RABGGTA-201ENST00000216840 SPART-AS1P0CW21 52 aa12.03□□□□□ -0.48
RABGGTA-201ENST00000216840 TRAV13-1A0A0B4J241 112 aa12.02□□□□□ -0.48
RABGGTA-201ENST00000216840 C9orf118A6NHY6 69 aa12.02□□□□□ -0.48
RABGGTA-201ENST00000216840 HERVK_113P63121 156 aa12.02□□□□□ -0.48
RABGGTA-201ENST00000216840 RAB37Q96AX2 223 aa12.02□□□□□ -0.48
RABGGTA-201ENST00000216840 CHCHD5Q9BSY4 110 aa12.02□□□□□ -0.48
RABGGTA-201ENST00000216840 NHP2Q9NX24 153 aaKnown RBP12.02□□□□□ -0.48
RABGGTA-201ENST00000216840 SPANXB1Q9NS25 103 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-201ENST00000216840 K7ERJ3 54 aa12.01□□□□□ -0.49
RABGGTA-201ENST00000216840 ATP5G1P05496 136 aa12.01□□□□□ -0.49
RABGGTA-201ENST00000216840 SRSF9Q13242 221 aaKnown RBP eCLIP12.01□□□□□ -0.49
RABGGTA-201ENST00000216840 VAMP3Q15836 100 aa12.01□□□□□ -0.49
RABGGTA-201ENST00000216840 PKD1L1Q8TDX9 2849 aa12.01□□□□□ -0.49
RABGGTA-201ENST00000216840 G3V4G9 280 aa12.01□□□□□ -0.49
RABGGTA-201ENST00000216840 C10orf126Q8N4M7 172 aa12.01□□□□□ -0.49
RABGGTA-201ENST00000216840 DNAH3Q8TD57 4116 aa12□□□□□ -0.49
RABGGTA-201ENST00000216840 IGLV4-60A0A075B6I1 120 aa11.99□□□□□ -0.49
RABGGTA-201ENST00000216840 RETNQ9HD89 108 aa11.99□□□□□ -0.49
RABGGTA-201ENST00000216840 A0A096LPF7 62 aa11.99□□□□□ -0.49
RABGGTA-201ENST00000216840 H3BUT2 72 aa11.99□□□□□ -0.49
RABGGTA-201ENST00000216840 UBE2V1Q13404 147 aa11.99□□□□□ -0.49
RABGGTA-201ENST00000216840 C12orf74Q32Q52 190 aa11.99□□□□□ -0.49
RABGGTA-201ENST00000216840 NAA38Q9BRA0 125 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-201ENST00000216840 A0A0J9YXY3 114 aa11.98□□□□□ -0.49
RABGGTA-201ENST00000216840 F5H768 121 aa11.98□□□□□ -0.49
RABGGTA-201ENST00000216840 CCL25O15444 150 aa11.98□□□□□ -0.49
RABGGTA-201ENST00000216840 IGHV3-30P01768 117 aa11.98□□□□□ -0.49
RABGGTA-201ENST00000216840 IGHV3-30-5P0DP03 117 aa11.98□□□□□ -0.49
RABGGTA-201ENST00000216840 COL6A5A8TX70 2615 aa11.97□□□□□ -0.49
RABGGTA-201ENST00000216840 TRAV26-1A0A087WT03 109 aa11.97□□□□□ -0.49
RABGGTA-201ENST00000216840 A0A1B0GWB2 263 aa11.97□□□□□ -0.49
RABGGTA-201ENST00000216840 NDUFA12Q9UI09 145 aa11.97□□□□□ -0.49
RABGGTA-201ENST00000216840 IGLV5-39A0A0G2JS06 123 aa11.96□□□□□ -0.49
RABGGTA-201ENST00000216840 ZFAND6Q6FIF0 208 aa11.96□□□□□ -0.49
RABGGTA-201ENST00000216840 TEX48A0A1B0GUV7 120 aa11.95□□□□□ -0.5
RABGGTA-201ENST00000216840 SMIM1B2RUZ4 78 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms