RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 NTM-AS1Q6ZSK4 140 aa12.89□□□□□ -0.35
SLC22A4-201ENST00000200652 C10orf126Q8N4M7 172 aa12.89□□□□□ -0.35
SLC22A4-201ENST00000200652 TRGV2A0A075B6R0 118 aa12.88□□□□□ -0.35
SLC22A4-201ENST00000200652 GAGE12JA6NER3 117 aa12.88□□□□□ -0.35
SLC22A4-201ENST00000200652 GAGE4Q13068 117 aa12.88□□□□□ -0.35
SLC22A4-201ENST00000200652 GAGE5Q13069 117 aa12.88□□□□□ -0.35
SLC22A4-201ENST00000200652 GAGE13Q4V321 117 aa12.88□□□□□ -0.35
SLC22A4-201ENST00000200652 HECTD1Q9ULT8 2610 aa12.88□□□□□ -0.35
SLC22A4-201ENST00000200652 NOTCH3Q9UM47 2321 aa12.88□□□□□ -0.35
SLC22A4-201ENST00000200652 APOMO95445 188 aa12.88□□□□□ -0.35
SLC22A4-201ENST00000200652 LINC00694P0DN24 101 aa12.88□□□□□ -0.35
SLC22A4-201ENST00000200652 A0A0J9YXY3 114 aa12.86□□□□□ -0.35
SLC22A4-201ENST00000200652 SPINK8P0C7L1 97 aa12.86□□□□□ -0.35
SLC22A4-201ENST00000200652 CFC1BP0CG36 223 aa12.86□□□□□ -0.35
SLC22A4-201ENST00000200652 CFC1P0CG37 223 aa12.86□□□□□ -0.35
SLC22A4-201ENST00000200652 VSIG2Q96IQ7 327 aa12.86□□□□□ -0.35
SLC22A4-201ENST00000200652 GEMIN7Q9H840 131 aaKnown RBP12.86□□□□□ -0.35
SLC22A4-201ENST00000200652 SBSPONQ8IVN8 264 aa12.85□□□□□ -0.35
SLC22A4-201ENST00000200652 CIDEAO60543 219 aa12.85□□□□□ -0.35
SLC22A4-201ENST00000200652 TSPAN13O95857 204 aa12.85□□□□□ -0.35
SLC22A4-201ENST00000200652 TIRAPP58753 221 aa12.85□□□□□ -0.35
SLC22A4-201ENST00000200652 CBY1Q9Y3M2 126 aa12.84□□□□□ -0.35
SLC22A4-201ENST00000200652 IGLV5-45A0A087WSX0 123 aa12.84□□□□□ -0.35
SLC22A4-201ENST00000200652 TRBV6-4A0A1B0GX49 114 aa12.84□□□□□ -0.35
SLC22A4-201ENST00000200652 A8MZ25 164 aa12.84□□□□□ -0.35
SLC22A4-201ENST00000200652 TMEM238C9JI98 176 aa12.84□□□□□ -0.35
SLC22A4-201ENST00000200652 H3BMG7 143 aa12.84□□□□□ -0.35
SLC22A4-201ENST00000200652 RNF151Q2KHN1 245 aa12.84□□□□□ -0.35
SLC22A4-201ENST00000200652 CDKN2A-AS1Q9UH64 79 aa12.84□□□□□ -0.35
SLC22A4-201ENST00000200652 CSDC2Q9Y534 153 aaKnown RBP12.84□□□□□ -0.35
SLC22A4-201ENST00000200652 LOC100131303A0A0U1RQF7 123 aa12.83□□□□□ -0.36
SLC22A4-201ENST00000200652 K7ERU9 68 aa12.83□□□□□ -0.36
SLC22A4-201ENST00000200652 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.83□□□□□ -0.36
SLC22A4-201ENST00000200652 COX6A2Q02221 97 aa12.82□□□□□ -0.36
SLC22A4-201ENST00000200652 MUSTN1Q8IVN3 82 aa12.82□□□□□ -0.36
SLC22A4-201ENST00000200652 SPATA3Q8NHX4 192 aa12.82□□□□□ -0.36
SLC22A4-201ENST00000200652 NDUFA12Q9UI09 145 aa12.82□□□□□ -0.36
SLC22A4-201ENST00000200652 OTOGQ6ZRI0 2925 aa12.82□□□□□ -0.36
SLC22A4-201ENST00000200652 TRGV4A0A0C4DH28 118 aa12.82□□□□□ -0.36
SLC22A4-201ENST00000200652 A4D1N5 150 aa12.82□□□□□ -0.36
SLC22A4-201ENST00000200652 GTSF1LQ9H1H1 148 aa12.82□□□□□ -0.36
SLC22A4-201ENST00000200652 LITAFQ99732 161 aa12.81□□□□□ -0.36
SLC22A4-201ENST00000200652 FHL2Q14192 279 aa12.81□□□□□ -0.36
SLC22A4-201ENST00000200652 LINC00242Q5T6M2 205 aa12.81□□□□□ -0.36
SLC22A4-201ENST00000200652 F8W1H4 67 aa12.8□□□□□ -0.36
SLC22A4-201ENST00000200652 FAM19A3Q7Z5A8 133 aa12.8□□□□□ -0.36
SLC22A4-201ENST00000200652 CRLF1O75462 422 aa12.8□□□□□ -0.36
SLC22A4-201ENST00000200652 INSL3P51460 131 aa12.8□□□□□ -0.36
SLC22A4-201ENST00000200652 RPL24P83731 157 aaKnown RBP12.8□□□□□ -0.36
SLC22A4-201ENST00000200652 ZFAND6Q6FIF0 208 aa12.8□□□□□ -0.36
SLC22A4-201ENST00000200652 CDC42SE2Q9NRR3 84 aa12.8□□□□□ -0.36
SLC22A4-201ENST00000200652 PRO1854Q9UHT4 67 aa12.8□□□□□ -0.36
SLC22A4-201ENST00000200652 EIF4EBP3O60516 100 aaPredicted RBP12.79□□□□□ -0.36
SLC22A4-201ENST00000200652 HERVK_113P63121 156 aa12.79□□□□□ -0.36
SLC22A4-201ENST00000200652 SFTA2Q6UW10 78 aa12.79□□□□□ -0.36
SLC22A4-201ENST00000200652 TMEM101Q96IK0 257 aa12.79□□□□□ -0.36
SLC22A4-201ENST00000200652 TMEM243Q9BU79 118 aa12.79□□□□□ -0.36
SLC22A4-201ENST00000200652 LOC107984156A0A0G2JMH3 177 aa12.78□□□□□ -0.36
SLC22A4-201ENST00000200652 SMAGPQ0VAQ4 97 aa12.78□□□□□ -0.36
SLC22A4-201ENST00000200652 WFDC2Q14508 124 aa12.78□□□□□ -0.36
SLC22A4-201ENST00000200652 C9orf66Q5T8R8 295 aa12.78□□□□□ -0.36
SLC22A4-201ENST00000200652 ARL17AQ8IVW1 177 aa12.78□□□□□ -0.36
SLC22A4-201ENST00000200652 NOTCH2Q04721 2471 aa12.78□□□□□ -0.36
SLC22A4-201ENST00000200652 UBE2L6O14933 153 aa12.77□□□□□ -0.36
SLC22A4-201ENST00000200652 ADAMTSL4-AS1Q5T5F5 129 aa12.77□□□□□ -0.36
SLC22A4-201ENST00000200652 C2CD3Q4AC94 2353 aa12.77□□□□□ -0.36
SLC22A4-201ENST00000200652 TRAV13-1A0A0B4J241 112 aa12.77□□□□□ -0.37
SLC22A4-201ENST00000200652 PRO0461Q9UI25 63 aa12.77□□□□□ -0.37
SLC22A4-201ENST00000200652 FN1P02751 2386 aaKnown RBP12.77□□□□□ -0.37
SLC22A4-201ENST00000200652 KIR2DL5BQ8NHK3 375 aa12.76□□□□□ -0.37
SLC22A4-201ENST00000200652 A0A0B4J2C4 111 aa12.76□□□□□ -0.37
SLC22A4-201ENST00000200652 G3V4G9 280 aa12.76□□□□□ -0.37
SLC22A4-201ENST00000200652 SPANXDQ9BXN6 97 aa12.76□□□□□ -0.37
SLC22A4-201ENST00000200652 SPANXCQ9NY87 97 aa12.76□□□□□ -0.37
SLC22A4-201ENST00000200652 X6R8D5 127 aa12.76□□□□□ -0.37
SLC22A4-201ENST00000200652 IGLV5-39A0A0G2JS06 123 aa12.75□□□□□ -0.37
SLC22A4-201ENST00000200652 DEFB130BP0DP73 79 aa12.75□□□□□ -0.37
SLC22A4-201ENST00000200652 DEFB130AP0DP74 79 aa12.75□□□□□ -0.37
SLC22A4-201ENST00000200652 LINC00612Q8N6U2 182 aa12.75□□□□□ -0.37
SLC22A4-201ENST00000200652 VPS25Q9BRG1 176 aa12.75□□□□□ -0.37
SLC22A4-201ENST00000200652 H7C423 109 aa12.74□□□□□ -0.37
SLC22A4-201ENST00000200652 MTURNQ8N3F0 131 aa12.74□□□□□ -0.37
SLC22A4-201ENST00000200652 NSD1Q96L73 2696 aaPredicted RBP12.74□□□□□ -0.37
SLC22A4-201ENST00000200652 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.74□□□□□ -0.37
SLC22A4-201ENST00000200652 NDUFA1O15239 70 aa12.74□□□□□ -0.37
SLC22A4-201ENST00000200652 IGHV3-33P01772 117 aa12.74□□□□□ -0.37
SLC22A4-201ENST00000200652 PRSS2P07478 247 aa12.74□□□□□ -0.37
SLC22A4-201ENST00000200652 PSMB2P49721 201 aa12.74□□□□□ -0.37
SLC22A4-201ENST00000200652 TEX48A0A1B0GUV7 120 aa12.73□□□□□ -0.37
SLC22A4-201ENST00000200652 LYRM7Q5U5X0 104 aa12.73□□□□□ -0.37
SLC22A4-201ENST00000200652 MIAQ16674 131 aa12.73□□□□□ -0.37
SLC22A4-201ENST00000200652 SMIM1B2RUZ4 78 aa12.72□□□□□ -0.37
SLC22A4-201ENST00000200652 TRBV6-8A0A0A6YYG3 113 aa12.72□□□□□ -0.37
SLC22A4-201ENST00000200652 SMIM9A6NGZ8 99 aa12.72□□□□□ -0.37
SLC22A4-201ENST00000200652 TIMM17BO60830 172 aa12.72□□□□□ -0.37
SLC22A4-201ENST00000200652 GAGE6Q13070 117 aa12.72□□□□□ -0.37
SLC22A4-201ENST00000200652 CITED1Q99966 193 aa12.72□□□□□ -0.37
SLC22A4-201ENST00000200652 ERG28Q9UKR5 140 aa12.71□□□□□ -0.37
SLC22A4-201ENST00000200652 F5H768 121 aa12.7□□□□□ -0.38
SLC22A4-201ENST00000200652 TCL1BO95988 128 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms