RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 OVOL2Q9BRP0 275 aa18.57■□□□□ 0.56
RTN4R-201ENST00000043402 SPANXB1Q9NS25 103 aaPredicted RBP18.57■□□□□ 0.56
RTN4R-201ENST00000043402 UBE2D3P61077 147 aa18.55■□□□□ 0.56
RTN4R-201ENST00000043402 UBE2D2P62837 147 aa18.55■□□□□ 0.56
RTN4R-201ENST00000043402 TRGV2A0A075B6R0 118 aa18.55■□□□□ 0.56
RTN4R-201ENST00000043402 TINCRA0A1B0GVN0 87 aa18.55■□□□□ 0.56
RTN4R-201ENST00000043402 GAGE12JA6NER3 117 aa18.55■□□□□ 0.56
RTN4R-201ENST00000043402 LINC00694P0DN24 101 aa18.55■□□□□ 0.56
RTN4R-201ENST00000043402 IGHV3-30-3P0DP02 117 aa18.55■□□□□ 0.56
RTN4R-201ENST00000043402 GAGE4Q13068 117 aa18.55■□□□□ 0.56
RTN4R-201ENST00000043402 GAGE5Q13069 117 aa18.55■□□□□ 0.56
RTN4R-201ENST00000043402 GAGE13Q4V321 117 aa18.55■□□□□ 0.56
RTN4R-201ENST00000043402 TRAV8-3A0A0A6YYJ7 113 aa18.54■□□□□ 0.56
RTN4R-201ENST00000043402 IGHV3-30P01768 117 aa18.54■□□□□ 0.56
RTN4R-201ENST00000043402 IGHV3-30-5P0DP03 117 aa18.54■□□□□ 0.56
RTN4R-201ENST00000043402 TENM1Q9UKZ4 2725 aa18.54■□□□□ 0.56
RTN4R-201ENST00000043402 UBE2D1P51668 147 aa18.54■□□□□ 0.56
RTN4R-201ENST00000043402 TMEM238LA0A1B0GVL6 79 aa18.53■□□□□ 0.56
RTN4R-201ENST00000043402 A6NJY4 79 aa18.53■□□□□ 0.56
RTN4R-201ENST00000043402 DAZ4Q86SG3 579 aaKnown RBP18.53■□□□□ 0.56
RTN4R-201ENST00000043402 DAZ3Q9NR90 486 aaKnown RBP18.53■□□□□ 0.56
RTN4R-201ENST00000043402 TIMM21Q9BVV7 248 aa18.52■□□□□ 0.56
RTN4R-201ENST00000043402 C10orf126Q8N4M7 172 aa18.52■□□□□ 0.56
RTN4R-201ENST00000043402 F8W1H4 67 aa18.51■□□□□ 0.55
RTN4R-201ENST00000043402 LOC100131303A0A0U1RQF7 123 aa18.5■□□□□ 0.55
RTN4R-201ENST00000043402 RPL24P83731 157 aaKnown RBP18.5■□□□□ 0.55
RTN4R-201ENST00000043402 DGAT2L7PQ6IED9 249 aa18.5■□□□□ 0.55
RTN4R-201ENST00000043402 IGHV1-58A0A0C4DH39 117 aa18.49■□□□□ 0.55
RTN4R-201ENST00000043402 H3BMG7 143 aa18.49■□□□□ 0.55
RTN4R-201ENST00000043402 SBSPONQ8IVN8 264 aa18.49■□□□□ 0.55
RTN4R-201ENST00000043402 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.48■□□□□ 0.55
RTN4R-201ENST00000043402 PGPEP1Q9NXJ5 209 aa18.48■□□□□ 0.55
RTN4R-201ENST00000043402 A8MZ25 164 aa18.47■□□□□ 0.55
RTN4R-201ENST00000043402 SPINK8P0C7L1 97 aa18.47■□□□□ 0.55
RTN4R-201ENST00000043402 VSIG2Q96IQ7 327 aa18.47■□□□□ 0.55
RTN4R-201ENST00000043402 TRBV6-4A0A1B0GX49 114 aa18.47■□□□□ 0.55
RTN4R-201ENST00000043402 A0A0J9YXY3 114 aa18.46■□□□□ 0.55
RTN4R-201ENST00000043402 TEX48A0A1B0GUV7 120 aa18.46■□□□□ 0.55
RTN4R-201ENST00000043402 APOMO95445 188 aa18.46■□□□□ 0.55
RTN4R-201ENST00000043402 GEMIN7Q9H840 131 aaKnown RBP18.46■□□□□ 0.55
RTN4R-201ENST00000043402 CDKN2A-AS1Q9UH64 79 aa18.46■□□□□ 0.55
RTN4R-201ENST00000043402 CRLF1O75462 422 aa18.45■□□□□ 0.54
RTN4R-201ENST00000043402 WFDC2Q14508 124 aa18.45■□□□□ 0.54
RTN4R-201ENST00000043402 INSL3P51460 131 aa18.45■□□□□ 0.54
RTN4R-201ENST00000043402 COX6A2Q02221 97 aa18.45■□□□□ 0.54
RTN4R-201ENST00000043402 FHL2Q14192 279 aa18.45■□□□□ 0.54
RTN4R-201ENST00000043402 CSDC2Q9Y534 153 aaKnown RBP18.45■□□□□ 0.54
RTN4R-201ENST00000043402 TRGV4A0A0C4DH28 118 aa18.44■□□□□ 0.54
RTN4R-201ENST00000043402 CIDEAO60543 219 aa18.44■□□□□ 0.54
RTN4R-201ENST00000043402 IGLV5-45A0A087WSX0 123 aa18.44■□□□□ 0.54
RTN4R-201ENST00000043402 CFC1BP0CG36 223 aa18.44■□□□□ 0.54
RTN4R-201ENST00000043402 CFC1P0CG37 223 aa18.44■□□□□ 0.54
RTN4R-201ENST00000043402 TIRAPP58753 221 aa18.44■□□□□ 0.54
RTN4R-201ENST00000043402 C9orf66Q5T8R8 295 aa18.43■□□□□ 0.54
RTN4R-201ENST00000043402 GTSF1LQ9H1H1 148 aa18.42■□□□□ 0.54
RTN4R-201ENST00000043402 LINC00242Q5T6M2 205 aa18.42■□□□□ 0.54
RTN4R-201ENST00000043402 NBEAL2Q6ZNJ1 2754 aa18.42■□□□□ 0.54
RTN4R-201ENST00000043402 TSPAN13O95857 204 aa18.41■□□□□ 0.54
RTN4R-201ENST00000043402 LITAFQ99732 161 aa18.41■□□□□ 0.54
RTN4R-201ENST00000043402 CDC42SE2Q9NRR3 84 aa18.41■□□□□ 0.54
RTN4R-201ENST00000043402 NDUFA12Q9UI09 145 aa18.41■□□□□ 0.54
RTN4R-201ENST00000043402 ATRQ13535 2644 aa18.4■□□□□ 0.54
RTN4R-201ENST00000043402 X6R8D5 127 aa18.4■□□□□ 0.54
RTN4R-201ENST00000043402 TRRAPQ9Y4A5 3859 aa18.4■□□□□ 0.54
RTN4R-201ENST00000043402 MUSTN1Q8IVN3 82 aa18.39■□□□□ 0.53
RTN4R-201ENST00000043402 CITED1Q99966 193 aa18.39■□□□□ 0.53
RTN4R-201ENST00000043402 A4D1N5 150 aa18.38■□□□□ 0.53
RTN4R-201ENST00000043402 TMEM238C9JI98 176 aa18.38■□□□□ 0.53
RTN4R-201ENST00000043402 DEFB130BP0DP73 79 aa18.38■□□□□ 0.53
RTN4R-201ENST00000043402 DEFB130AP0DP74 79 aa18.38■□□□□ 0.53
RTN4R-201ENST00000043402 TMEM243Q9BU79 118 aa18.38■□□□□ 0.53
RTN4R-201ENST00000043402 PRO0461Q9UI25 63 aa18.38■□□□□ 0.53
RTN4R-201ENST00000043402 EIF4EBP3O60516 100 aaPredicted RBP18.38■□□□□ 0.53
RTN4R-201ENST00000043402 FAM19A3Q7Z5A8 133 aa18.38■□□□□ 0.53
RTN4R-201ENST00000043402 KIR2DL5BQ8NHK3 375 aa18.37■□□□□ 0.53
RTN4R-201ENST00000043402 TMEM101Q96IK0 257 aa18.37■□□□□ 0.53
RTN4R-201ENST00000043402 TEP1Q99973 2627 aaKnown RBP18.37■□□□□ 0.53
RTN4R-201ENST00000043402 TRAV13-1A0A0B4J241 112 aa18.37■□□□□ 0.53
RTN4R-201ENST00000043402 ZFAND6Q6FIF0 208 aa18.37■□□□□ 0.53
RTN4R-201ENST00000043402 LINC00612Q8N6U2 182 aa18.37■□□□□ 0.53
RTN4R-201ENST00000043402 HERVK_113P63121 156 aa18.36■□□□□ 0.53
RTN4R-201ENST00000043402 SFTA2Q6UW10 78 aa18.36■□□□□ 0.53
RTN4R-201ENST00000043402 ETDBQ3ZM63 59 aa18.35■□□□□ 0.53
RTN4R-201ENST00000043402 ADAMTSL4-AS1Q5T5F5 129 aa18.35■□□□□ 0.53
RTN4R-201ENST00000043402 MTURNQ8N3F0 131 aa18.35■□□□□ 0.53
RTN4R-201ENST00000043402 SH2D6Q7Z4S9 175 aa18.35■□□□□ 0.53
RTN4R-201ENST00000043402 UBE2L6O14933 153 aa18.34■□□□□ 0.53
RTN4R-201ENST00000043402 LOC107984156A0A0G2JMH3 177 aa18.34■□□□□ 0.53
RTN4R-201ENST00000043402 ARL17AQ8IVW1 177 aa18.34■□□□□ 0.53
RTN4R-201ENST00000043402 PRO1854Q9UHT4 67 aa18.32■□□□□ 0.52
RTN4R-201ENST00000043402 IGLV5-39A0A0G2JS06 123 aa18.32■□□□□ 0.52
RTN4R-201ENST00000043402 J3QR89 54 aa18.32■□□□□ 0.52
RTN4R-201ENST00000043402 SMAGPQ0VAQ4 97 aa18.31■□□□□ 0.52
RTN4R-201ENST00000043402 TRBV6-8A0A0A6YYG3 113 aa18.3■□□□□ 0.52
RTN4R-201ENST00000043402 PSMB2P49721 201 aa18.3■□□□□ 0.52
RTN4R-201ENST00000043402 LYRM7Q5U5X0 104 aa18.3■□□□□ 0.52
RTN4R-201ENST00000043402 SMIM9A6NGZ8 99 aa18.3■□□□□ 0.52
RTN4R-201ENST00000043402 H7C423 109 aa18.3■□□□□ 0.52
RTN4R-201ENST00000043402 SMIM1B2RUZ4 78 aa18.29■□□□□ 0.52
RTN4R-201ENST00000043402 GAGE6Q13070 117 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms