RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 TIMM17BO60830 172 aa3.1□□□□□ -1.91
CFTR-201ENST00000003084 LY6G6CO95867 125 aa3.1□□□□□ -1.91
CFTR-201ENST00000003084 FOXI1Q12951 378 aa3.1□□□□□ -1.91
CFTR-201ENST00000003084 TRACP01848 142 aa3.1□□□□□ -1.91
CFTR-201ENST00000003084 NANOS2P60321 138 aaKnown RBP3.1□□□□□ -1.91
CFTR-201ENST00000003084 UBE2D3P61077 147 aa3.1□□□□□ -1.91
CFTR-201ENST00000003084 UBE2D2P62837 147 aa3.1□□□□□ -1.91
CFTR-201ENST00000003084 PRR26Q8N8Z3 221 aa3.1□□□□□ -1.91
CFTR-201ENST00000003084 MRPS12O15235 138 aaKnown RBP3.09□□□□□ -1.91
CFTR-201ENST00000003084 TSHBP01222 138 aa3.09□□□□□ -1.91
CFTR-201ENST00000003084 NREPQ16612 68 aa3.09□□□□□ -1.91
CFTR-201ENST00000003084 CEMP1Q6PRD7 247 aaPredicted RBP3.09□□□□□ -1.91
CFTR-201ENST00000003084 RNASE8Q8TDE3 154 aaKnown RBP3.09□□□□□ -1.91
CFTR-201ENST00000003084 MED12Q93074 2177 aa3.09□□□□□ -1.91
CFTR-201ENST00000003084 IGKV2-24A0A0C4DH68 120 aa3.09□□□□□ -1.91
CFTR-201ENST00000003084 K7EP13 123 aa3.09□□□□□ -1.91
CFTR-201ENST00000003084 NUPR1O60356 82 aa3.09□□□□□ -1.91
CFTR-201ENST00000003084 FRMD6-AS1P0C7T7 363 aa3.09□□□□□ -1.91
CFTR-201ENST00000003084 FAM19A1Q7Z5A9 133 aa3.09□□□□□ -1.91
CFTR-201ENST00000003084 SPTBN5Q9NRC6 3674 aaKnown RBP3.09□□□□□ -1.91
CFTR-201ENST00000003084 RBX1P62877 108 aa3.09□□□□□ -1.92
CFTR-201ENST00000003084 RBM3P98179 157 aaKnown RBP3.09□□□□□ -1.92
CFTR-201ENST00000003084 ODF3L2Q3SX64 289 aa3.09□□□□□ -1.92
CFTR-201ENST00000003084 LAMA1P25391 3075 aa3.09□□□□□ -1.92
CFTR-201ENST00000003084 A0A087WZ39 114 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 TRBV10-2A0A0K0K1G8 114 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 PRR9Q5T870 116 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 NTN5Q8WTR8 489 aaPredicted RBP3.08□□□□□ -1.92
CFTR-201ENST00000003084 UBE2D4Q9Y2X8 147 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 CPAMD8Q8IZJ3 1885 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 PCNX2A6NKB5 2137 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 H3BT86 120 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 M0R378 163 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 ZNF22P17026 224 aaPredicted RBP3.08□□□□□ -1.92
CFTR-201ENST00000003084 SPATA3Q8NHX4 192 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 WFDC10AQ9H1F0 79 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 DHRS4-AS1Q9P1J3 65 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 V9GYY9 64 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 ARHGAP21Q5T5U3 1957 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 LINC00959A0A1B0GUT2 108 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 H3BMG7 143 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 DAND5Q8N907 189 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 CNFNQ9BYD5 112 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 CACNA1BQ00975 2339 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 UBE2D1P51668 147 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 SMIM20Q8N5G0 67 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 KRTAP23-1A1A580 65 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 LECT2O14960 151 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 COX8CQ7Z4L0 72 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 DOCK7Q96N67 2140 aa3.08□□□□□ -1.92
CFTR-201ENST00000003084 TRBV30A0A0K0K1B3 111 aa3.07□□□□□ -1.92
CFTR-201ENST00000003084 PROK1P58294 105 aa3.07□□□□□ -1.92
CFTR-201ENST00000003084 MP68P56378 58 aa3.07□□□□□ -1.92
CFTR-201ENST00000003084 TMEM258P61165 79 aa3.07□□□□□ -1.92
CFTR-201ENST00000003084 FAM19A5Q7Z5A7 132 aaPredicted RBP3.07□□□□□ -1.92
CFTR-201ENST00000003084 MKI67P46013 3256 aaKnown RBP3.07□□□□□ -1.92
CFTR-201ENST00000003084 WDR87Q6ZQQ6 2873 aa3.07□□□□□ -1.92
CFTR-201ENST00000003084 FHL3Q13643 280 aa3.07□□□□□ -1.92
CFTR-201ENST00000003084 Q8IZM0 81 aa3.07□□□□□ -1.92
CFTR-201ENST00000003084 CDKN2A-AS1Q9UH64 79 aa3.07□□□□□ -1.92
CFTR-201ENST00000003084 TNRC6BQ9UPQ9 1833 aaKnown RBP3.07□□□□□ -1.92
CFTR-201ENST00000003084 POLR2KP53803 58 aaKnown RBP3.07□□□□□ -1.92
CFTR-201ENST00000003084 LINC01561Q8N1V8 128 aa3.07□□□□□ -1.92
CFTR-201ENST00000003084 TRAV23DV6A0A075B6W5 121 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 ALPK2Q86TB3 2170 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 KIAA2026Q5HYC2 2103 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 PCNX3Q9H6A9 2034 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 LINC00308Q8TCZ7 52 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 ARID1AO14497 2285 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 IGLV2-18A0A075B6J9 118 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 LOC100131303A0A0U1RQF7 123 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 M0R2N4 97 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 FXYD2P54710 66 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 ETDBQ3ZM63 59 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 TRIOO75962 3097 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 INTS1Q8N201 2190 aaKnown RBP3.06□□□□□ -1.92
CFTR-201ENST00000003084 C1orf158Q8N1D5 194 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.06□□□□□ -1.92
CFTR-201ENST00000003084 CDC42SE2Q9NRR3 84 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 EP300Q09472 2414 aaPredicted RBP3.06□□□□□ -1.92
CFTR-201ENST00000003084 ATG2AQ2TAZ0 1938 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 GPR179Q6PRD1 2367 aa3.06□□□□□ -1.92
CFTR-201ENST00000003084 HIGD2AQ9BW72 106 aa3.05□□□□□ -1.92
CFTR-201ENST00000003084 GTF3C1Q12789 2109 aa3.05□□□□□ -1.92
CFTR-201ENST00000003084 A0A1B0GX51 115 aa3.05□□□□□ -1.92
CFTR-201ENST00000003084 HTTP42858 3142 aa3.05□□□□□ -1.92
CFTR-201ENST00000003084 C1orf134Q5TEV5 83 aa3.05□□□□□ -1.92
CFTR-201ENST00000003084 TEN1Q86WV5 123 aa3.05□□□□□ -1.92
CFTR-201ENST00000003084 CLEC2BQ92478 149 aa3.05□□□□□ -1.92
CFTR-201ENST00000003084 SS18L2Q9UHA2 77 aa3.05□□□□□ -1.92
CFTR-201ENST00000003084 IGLV5-52A0A0A0MRZ9 124 aa3.05□□□□□ -1.92
CFTR-201ENST00000003084 CHKB-CPT1BH3BT56 60 aa3.05□□□□□ -1.92
CFTR-201ENST00000003084 PRB2P02812 416 aaPredicted RBP3.05□□□□□ -1.92
CFTR-201ENST00000003084 EGFEM1PQ0D2K5 195 aa3.05□□□□□ -1.92
CFTR-201ENST00000003084 CSDC2Q9Y534 153 aaKnown RBP3.05□□□□□ -1.92
CFTR-201ENST00000003084 PLAC8L1A1L4L8 177 aa3.04□□□□□ -1.92
CFTR-201ENST00000003084 UPK3BQ9BT76 320 aa3.04□□□□□ -1.92
CFTR-201ENST00000003084 C10orf25Q5T742 122 aa3.04□□□□□ -1.92
CFTR-201ENST00000003084 C2orf48Q96LS8 159 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms