RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Mcrip2Q9CQB2 160 aaKnown RBP6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Klf13Q9JJZ6 289 aa6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Lsm4Q9QXA5 137 aaKnown RBP6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Gm12728V9GX31 77 aa6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Cacna1bO55017 2327 aa6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 F8Q06194 2319 aa6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Trav14n-3A0A075B645 120 aa6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Vmn1r1E9PVR6 306 aa6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Olfr92L7N475 312 aa6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 P01790 122 aa6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 NpsP0C0P8 89 aa6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 TbpP29037 316 aa6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Olfr1381Q7TQT4 311 aa6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Olfr1373Q7TQT6 311 aa6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Nat6Q9R123 314 aa6.17□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Rai1Q61818 1889 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Pilrb2Q2YFS1 225 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Vmn1r195Q5SVD6 316 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Ccl12Q62401 104 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Fam168aQ8BGZ2 244 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 MavsQ8VCF0 503 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Hsd17b13Q8VCR2 304 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Olfr1350Q8VF34 308 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Tmem210Q9D2F0 147 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Prok2Q9QXU7 128 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Dnase2bQ9QY48 354 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Tcrg-C2A0A075B5Z2 167 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Gm6970F7DCP6 221 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Gm21719J3KMI9 230 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 ColqO35348 457 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 P01795 144 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 P01804 111 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 P01853 167 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Hoxb2P0C1T1 354 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Khdc1bP0C7A0 126 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 NpyP57774 97 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Mex3bQ69Z36 601 aaKnown RBP6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Vstm2lQ6PDS0 220 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Ifi27Q8C6G0 260 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Siglec12Q91Y57 467 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Rpp25lQ99JH1 163 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 PigpQ9JHG1 132 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Tmem196V9GX04 182 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 CenpfE9Q3P4 2997 aaKnown RBP6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Gm6096D3YTY6 151 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Omt2bD3YX29 119 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Zfp493E9Q1L8 384 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Cdkn1bP46414 197 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 B230104I21RikQ3USW4 141 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Vgll4Q80V24 287 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Gm9944Q8C559 102 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Dmrtc2Q8CGW9 370 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 B4galt7Q8R087 327 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Wdr5bQ9D7H2 328 aa6.16□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Olfr753-ps1A0A140LHN3 164 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Olfr177E9Q7W1 309 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Olfr1185-ps1F6XP16 303 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Gm5426J3QNM7 103 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 P01746 140 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Mamld1P0C6A2 803 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Prrx2Q06348 247 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Gm11232Q5SPI8 295 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Gm11733Q8BQP1 125 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 RabepkQ8VCH5 380 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Srd5a2Q99N99 254 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Xlr5cQ9JJR2 179 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Tcf23Q9JLR5 209 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Klk1b27Q9JM71 263 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 PtprbB2RU80 1998 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Trav16d-dv11A0A075B617 117 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Trav16nA0A075B634 117 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Gm45844A0A1B0GRQ2 137 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 H2al2bA9Z055 111 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Zfp976E9Q981 636 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Gm21775J3KMK6 180 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Hint1P70349 126 aaKnown RBP6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Klk1b21Q61759 261 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Zfp874aQ8BX23 447 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Necap2Q9D1J1 266 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Wfdc2Q9DAU7 174 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Znf22Q9ERU3 237 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Cryba4Q9JJV0 196 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Rabac1Q9Z0S9 185 aa6.15□□□□□ -1.42
Bdnf-204ENSMUST00000111044 Fer1l4A3KGK3 1992 aa6.15□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Gm28269A0A087WSG3 125 aa6.15□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Gm6993A0A1W2P738 69 aa6.15□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Tac3P55099 116 aa6.15□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Fam3dP97805 223 aa6.15□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Zfp936Q3ULA8 456 aa6.15□□□□□ -1.43
Bdnf-204ENSMUST00000111044 9130213A22RikQ3V3T2 120 aa6.15□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Ppp1r3cQ7TMB3 317 aa6.15□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Olfr1380Q7TQT5 311 aa6.15□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Prrg4Q8BGN6 226 aa6.15□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Msrb3Q8BU85 253 aa6.15□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Zmat4Q8BZ94 229 aa6.15□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Scnm1Q8K136 229 aa6.15□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Sco2Q8VCL2 255 aa6.15□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Tcrg-C1A0A075B5Z0 172 aa6.14□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Ighv7-2A0A0A6YX91 119 aa6.14□□□□□ -1.43
Bdnf-204ENSMUST00000111044 Ighv1-36A0A0A6YXT2 117 aa6.14□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms