RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Ighv1-15A0A0A6YXA5 117 aa12.9□□□□□ -0.34
Ckap4-201ENSMUST00000053871 A0A286YCQ8 80 aa12.9□□□□□ -0.34
Ckap4-201ENSMUST00000053871 Olfr177E9Q7W1 309 aa12.9□□□□□ -0.34
Ckap4-201ENSMUST00000053871 MymxQ2Q5T5 84 aa12.9□□□□□ -0.34
Ckap4-201ENSMUST00000053871 Slc17a2Q5SZA1 478 aa12.9□□□□□ -0.34
Ckap4-201ENSMUST00000053871 Ndufv3Q8BK30 104 aaKnown RBP12.9□□□□□ -0.34
Ckap4-201ENSMUST00000053871 Eda2rQ8BX35 297 aa12.9□□□□□ -0.34
Ckap4-201ENSMUST00000053871 Q9D8L0 127 aa12.9□□□□□ -0.34
Ckap4-201ENSMUST00000053871 PigyP0C1P0 71 aa12.9□□□□□ -0.34
Ckap4-201ENSMUST00000053871 Loxl2P58022 776 aa12.9□□□□□ -0.34
Ckap4-201ENSMUST00000053871 Cox19Q8K0C8 92 aa12.9□□□□□ -0.34
Ckap4-201ENSMUST00000053871 Oxld1Q9CR10 201 aa12.9□□□□□ -0.34
Ckap4-201ENSMUST00000053871 Gng10Q9CXP8 68 aa12.9□□□□□ -0.34
Ckap4-201ENSMUST00000053871 Atg101Q9D8Z6 218 aa12.9□□□□□ -0.34
Ckap4-201ENSMUST00000053871 Ighv5-9A0A075B5Q2 117 aa12.9□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Trav9-1A0A075B601 112 aa12.9□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Cox7a2P48771 83 aa12.9□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Olfr823Q7TRH2 315 aa12.9□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Olfr266Q8VFC3 316 aa12.9□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Olfr824Q8VFU4 315 aa12.9□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Foxj2Q9ES18 565 aa12.9□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Trappc2lQ9JME7 139 aa12.9□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Mettl23A2AA28 253 aa12.89□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Zfp867E9Q2M4 473 aa12.89□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Olfr877Q8VF62 311 aa12.89□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Slc31a2Q9CPU9 143 aa12.89□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Pam16Q9CQV1 125 aa12.89□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Gnb4P29387 340 aa12.89□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Arl11Q6P3A9 176 aa12.89□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Ppp1r3cQ7TMB3 317 aa12.89□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Olfr1242Q8VGM6 306 aa12.89□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Lypd8Q9D7S0 255 aa12.89□□□□□ -0.35
Ckap4-201ENSMUST00000053871 NbeaQ9EPN1 2936 aa12.89□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Trav7-4A0A075B6C1 113 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Vma21-psA0A140T8R2 101 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Olfr15P23275 312 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Ypel3P61237 119 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Pilrb2Q2YFS1 225 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Arl14eplQ3UKZ7 152 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Trav7d-4Q5R1H9 113 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Znf329Q6GQR8 522 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Fam103a1Q9CQY2 119 aaKnown RBP12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Cxcr6Q9EQ16 351 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Vmn1r232A2RTT5 351 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Phxr2P15972 65 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Cox6a1P43024 111 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 SeboxP70368 190 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Spem1Q5F289 310 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Immp2lQ8BPT6 175 aa12.88□□□□□ -0.35
Ckap4-201ENSMUST00000053871 HaaoQ78JT3 286 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Arl6ip6Q8BH07 226 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Olfr1475Q8VEV6 314 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Trav12d-3A0A075B6A4 115 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Gm9920D3YVZ2 140 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Slc25a5P51881 298 aaKnown RBP12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Olfr148Q60887 310 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Lrfn3Q8BLY3 626 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Zdhhc16Q9ESG8 361 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Lrrk2Q5S006 2527 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 D930048N14RikA2AA67 225 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Gm28051J3QMA2 81 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Aqp7O54794 303 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Rab4aP56371 218 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Shisal1Q0VBP7 198 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 SnrpcQ62241 159 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Zfp874aQ8BX23 447 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 CcsQ9WU84 274 aa12.87□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Ccl17F6R5P4 103 aa12.86□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Scgb2a2J3KMP9 96 aa12.86□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Gm9602J3QPD5 205 aa12.86□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Onecut1O08755 465 aa12.86□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Foxi3E0CZH3 425 aa12.86□□□□□ -0.35
Ckap4-201ENSMUST00000053871 P04943 107 aa12.86□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Ighv3-6P18531 116 aa12.86□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Cisd1Q91WS0 108 aaKnown RBP12.86□□□□□ -0.35
Ckap4-201ENSMUST00000053871 V1ra8Q9EQ48 279 aa12.86□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Cspg4Q8VHY0 2327 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Fam19a2Q7TPG7 131 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Olfr996Q7TRA0 314 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Nrn1Q8CFV4 142 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Olfr1404Q8VGE1 313 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Igkv14-130A0A0G2JF45 117 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Zfp979A2A799 407 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Lgals1P16045 135 aaKnown RBP12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Ube2g1P62254 170 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Defb20Q30KP3 96 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Tbr1Q64336 681 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Ighv1-39A0A075B5V5 117 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Gm21913J3KML9 361 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Gm21776J3QPJ5 361 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Trav15-1-dv6-1Q5R1D2 117 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Hist2h2beQ64524 126 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Zg16Q8K0C5 167 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Necap1Q9CR95 275 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Ceacam11Q9D0Z8 303 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Kcnk5Q9JK62 502 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Pard6aQ9Z101 346 aa12.85□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Znf260Q62513 407 aa12.84□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Olfr816Q8VFU2 312 aa12.84□□□□□ -0.35
Ckap4-201ENSMUST00000053871 Zfp930A0A1D5RM15 441 aa12.84□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 65.2 ms