RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Tmprss5Q9ER04 455 aa12.02□□□□□ -0.48
Ushbp1-201ENSMUST00000049184 AtmQ62388 3066 aa12.02□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Trav6-6A0A075B603 114 aa12.02□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Tctn2Q2MV57 700 aa12.02□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Tmem129Q8K304 362 aa12.02□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Mrpl20Q9CQL4 149 aa12.02□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Cby1Q9D1C2 127 aa12.02□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Lbhd2G3UW55 114 aa12.01□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Gm21060J3KMU4 56 aa12.01□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Hoxb4P10284 250 aa12.01□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 SeleQ00690 612 aa12.01□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Olfr1381Q7TQT4 311 aa12.01□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Olfr1373Q7TQT6 311 aa12.01□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Alkbh6Q8K2U2 238 aa12.01□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Immp1lQ9CQU8 166 aa12.01□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Pf4Q9Z126 105 aa12.01□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Igkv6-23A0A140T8N5 115 aa12.01□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Icam2P35330 277 aa12.01□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 EpopQ7TNS8 369 aa12.01□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Ly6g5bQ8K1T4 194 aa12.01□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 SelenokQ9JLJ1 94 aa12.01□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Trbv19A0A0B4J1H4 117 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Ighv5-16A0A0B4J1P4 117 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 3110021N24RikJ3QMN2 152 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 NpyP57774 97 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 BtcQ05928 177 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Tmem167aQ9CR64 72 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Dchs1E9PVD3 3291 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Gm19345G3UYD9 124 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 P01630 113 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Tmem177Q8BPE4 311 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Zfp874aQ8BX23 447 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Stpg2Q8C8J0 561 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Vmn1r216Q8R257 298 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Olfr1271Q8VG62 305 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Vmn1r50Q9EP51 310 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Cend1Q9JKC6 149 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Hs3st3b1Q9QZS6 390 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Col6a3E9PWQ3 3284 aa12□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Trbv14A0A140T8L9 115 aa11.99□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Wfdc8Q4KUS1 273 aa11.99□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Oxld1Q9CR10 201 aa11.99□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Trav6n-6A0A075B6B2 114 aa11.99□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Ighv5-12-4A0A0A6YWG4 117 aa11.99□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 P01806 116 aa11.99□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 P04940 107 aa11.99□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 P04941 107 aa11.99□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Phxr2P15972 65 aa11.99□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Znf146Q8BQN6 292 aa11.99□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Fancd2osQ9D4K4 178 aa11.99□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Gm6970F7DCP6 221 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Hoxb2P0C1T1 354 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Slc25a5P51881 298 aaKnown RBP11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Cnep1r1Q3UJ81 125 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Gm10190Q8BSD7 107 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Olfr958Q8VEY3 312 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Olfr1367Q8VFG2 316 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Olfr1453Q8VFX0 307 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Pip4p2Q9CZX7 257 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Tmem126aQ9D8Y1 196 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Tmem225Q9D9S2 230 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 HeylQ9DBX7 326 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Ascl3Q9JJR7 174 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 PdfS4R2K0 231 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 TncQ80YX1 2110 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 P01792 123 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Adrb3P25962 400 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Lrfn3Q8BLY3 626 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Iba57Q8CAK1 358 aaKnown RBP11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Pxt1Q8K459 51 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Nup37Q9CWU9 326 aa11.98□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Cep290Q6A078 2472 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Vmn1r1E9PVR6 306 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Timm8bP62077 83 aaKnown RBP11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Dmrtc2Q8CGW9 370 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Olfr1184Q8VG86 311 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 4931428L18RikQ9D4S9 127 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Olfr961Q9EQ84 314 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Trav4-4-dv10A0A075B651 110 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Ighv8-4A0A0A6YW26 117 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Gm21974F6W3F3 119 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Fgfbp1O70514 251 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Emp2O88662 172 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Cox6a1P43024 111 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 ErhP84089 104 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Olfr823Q7TRH2 315 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Malsu1Q9CWV0 228 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Ociad2Q9D8W7 154 aa11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Urb1Q571H0 2274 aaKnown RBP11.97□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Tcrg-C2A0A075B5Z2 167 aa11.96□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Gm16442D3YZG3 307 aa11.96□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Gm26727M0QWT1 121 aa11.96□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 F2rl2O08675 369 aa11.96□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Gfra3O35118 397 aa11.96□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 P01853 167 aa11.96□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 G0s2Q61585 103 aa11.96□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Ube2d2bQ6ZWY6 147 aa11.96□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Sox21Q811W0 276 aa11.96□□□□□ -0.49
Ushbp1-201ENSMUST00000049184 Trav14-3A0A075B607 120 aa11.96□□□□□ -0.5
Ushbp1-201ENSMUST00000049184 Trav8n-2A0A075B633 112 aa11.96□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms