RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 PpoxP51175 477 aa18.26■□□□□ 0.51
Cln6-201ENSMUST00000034776 SnrpeP62305 92 aaKnown RBP18.26■□□□□ 0.51
Cln6-201ENSMUST00000034776 Gm10447Q3UQ92 135 aa18.26■□□□□ 0.51
Cln6-201ENSMUST00000034776 Msrb3Q8BU85 253 aa18.26■□□□□ 0.51
Cln6-201ENSMUST00000034776 Olfr495Q8VF12 330 aa18.26■□□□□ 0.51
Cln6-201ENSMUST00000034776 Cep250Q60952 2414 aa18.26■□□□□ 0.51
Cln6-201ENSMUST00000034776 Usp24B1AY13 2617 aaKnown RBP18.25■□□□□ 0.51
Cln6-201ENSMUST00000034776 Ighv1-55A0A075B5W6 117 aa18.25■□□□□ 0.51
Cln6-201ENSMUST00000034776 Thap8E9Q695 213 aa18.25■□□□□ 0.51
Cln6-201ENSMUST00000034776 Gm10309Q8C648 119 aa18.25■□□□□ 0.51
Cln6-201ENSMUST00000034776 Pus1Q9WU56 423 aa18.25■□□□□ 0.51
Cln6-201ENSMUST00000034776 Gm21913J3KML9 361 aa18.25■□□□□ 0.51
Cln6-201ENSMUST00000034776 Gm21776J3QPJ5 361 aa18.25■□□□□ 0.51
Cln6-201ENSMUST00000034776 Gm27021M0QWE2 156 aa18.25■□□□□ 0.51
Cln6-201ENSMUST00000034776 Edn1P22387 202 aa18.25■□□□□ 0.51
Cln6-201ENSMUST00000034776 BC049730Q810N3 246 aa18.25■□□□□ 0.51
Cln6-201ENSMUST00000034776 Ighv3-4A0A0A6YXF1 117 aa18.24■□□□□ 0.51
Cln6-201ENSMUST00000034776 Rsg1A2A825 258 aa18.24■□□□□ 0.51
Cln6-201ENSMUST00000034776 Tmem29A2ANF5 204 aa18.24■□□□□ 0.51
Cln6-201ENSMUST00000034776 Ube2e1P52482 193 aa18.24■□□□□ 0.51
Cln6-201ENSMUST00000034776 Gm9945Q8BNZ3 91 aa18.24■□□□□ 0.51
Cln6-201ENSMUST00000034776 Olfr1258Q8VGN6 311 aa18.24■□□□□ 0.51
Cln6-201ENSMUST00000034776 Cml1Q9JIZ0 222 aa18.24■□□□□ 0.51
Cln6-201ENSMUST00000034776 Olfr748E9Q9Z0 307 aa18.23■□□□□ 0.51
Cln6-201ENSMUST00000034776 Pfdn2O70591 154 aa18.23■□□□□ 0.51
Cln6-201ENSMUST00000034776 Edn3P48299 214 aa18.23■□□□□ 0.51
Cln6-201ENSMUST00000034776 Necap2Q9D1J1 266 aa18.23■□□□□ 0.51
Cln6-201ENSMUST00000034776 Rnase4Q9JJH1 148 aa18.23■□□□□ 0.51
Cln6-201ENSMUST00000034776 Ighv1-69A0A0G2JFS5 117 aa18.23■□□□□ 0.51
Cln6-201ENSMUST00000034776 Spaca3Q9D9X8 221 aa18.23■□□□□ 0.51
Cln6-201ENSMUST00000034776 Gm37388A0A0A6YY46 143 aa18.22■□□□□ 0.51
Cln6-201ENSMUST00000034776 Mettl8A2AUU0 281 aa18.22■□□□□ 0.51
Cln6-201ENSMUST00000034776 SrstQ06666 185 aa18.22■□□□□ 0.51
Cln6-201ENSMUST00000034776 Gm10803Q3TZS6 135 aa18.22■□□□□ 0.51
Cln6-201ENSMUST00000034776 Olfr958Q8VEY3 312 aa18.22■□□□□ 0.51
Cln6-201ENSMUST00000034776 Olfr959Q9EQ86 311 aa18.22■□□□□ 0.51
Cln6-201ENSMUST00000034776 Mamld1P0C6A2 803 aa18.22■□□□□ 0.51
Cln6-201ENSMUST00000034776 Vmn1r70Q8R254 298 aa18.22■□□□□ 0.51
Cln6-201ENSMUST00000034776 Olfr127Q8VF25 323 aa18.22■□□□□ 0.51
Cln6-201ENSMUST00000034776 Fbxo25Q9D2Y6 357 aa18.22■□□□□ 0.51
Cln6-201ENSMUST00000034776 Cxcr6Q9EQ16 351 aa18.22■□□□□ 0.51
Cln6-201ENSMUST00000034776 Trbv31A0A075B5J5 111 aa18.21■□□□□ 0.51
Cln6-201ENSMUST00000034776 Tmem139E9PX92 214 aa18.21■□□□□ 0.51
Cln6-201ENSMUST00000034776 Pfn1P62962 140 aa18.21■□□□□ 0.51
Cln6-201ENSMUST00000034776 Fam173aQ501J2 229 aa18.21■□□□□ 0.51
Cln6-201ENSMUST00000034776 Cd200r3Q5UKY4 296 aa18.21■□□□□ 0.51
Cln6-201ENSMUST00000034776 ArtnQ9Z0L2 224 aa18.21■□□□□ 0.51
Cln6-201ENSMUST00000034776 Plp1P60202 277 aa18.2■□□□□ 0.5
Cln6-201ENSMUST00000034776 Gng10Q9CXP8 68 aa18.2■□□□□ 0.5
Cln6-201ENSMUST00000034776 CklfQ9DAS1 152 aa18.2■□□□□ 0.5
Cln6-201ENSMUST00000034776 Vmn1r46Q9EQ45 309 aa18.2■□□□□ 0.5
Cln6-201ENSMUST00000034776 Sumo1P63166 101 aaKnown RBP18.2■□□□□ 0.5
Cln6-201ENSMUST00000034776 Ube2l3P68037 154 aaKnown RBP18.2■□□□□ 0.5
Cln6-201ENSMUST00000034776 Cldn16Q925N4 235 aa18.2■□□□□ 0.5
Cln6-201ENSMUST00000034776 Pard6aQ9Z101 346 aa18.2■□□□□ 0.5
Cln6-201ENSMUST00000034776 Igkv4-57A0A0A6YYE7 117 aa18.19■□□□□ 0.5
Cln6-201ENSMUST00000034776 Mettl23A2AA28 253 aa18.19■□□□□ 0.5
Cln6-201ENSMUST00000034776 Khdc1bP0C7A0 126 aa18.19■□□□□ 0.5
Cln6-201ENSMUST00000034776 Olfr263Q7TQT8 317 aa18.19■□□□□ 0.5
Cln6-201ENSMUST00000034776 Ccdc198Q9CPZ1 294 aa18.19■□□□□ 0.5
Cln6-201ENSMUST00000034776 Opn3Q9WUK7 400 aa18.19■□□□□ 0.5
Cln6-201ENSMUST00000034776 Olfr1445Q8VFW9 314 aa18.19■□□□□ 0.5
Cln6-201ENSMUST00000034776 HeylQ9DBX7 326 aa18.19■□□□□ 0.5
Cln6-201ENSMUST00000034776 Gm44501A8R0T9 150 aa18.18■□□□□ 0.5
Cln6-201ENSMUST00000034776 Gm10203F6QJ09 66 aa18.18■□□□□ 0.5
Cln6-201ENSMUST00000034776 P03980 138 aa18.18■□□□□ 0.5
Cln6-201ENSMUST00000034776 Sfrp2P97299 295 aa18.18■□□□□ 0.5
Cln6-201ENSMUST00000034776 Oosp2Q4FZG8 168 aa18.18■□□□□ 0.5
Cln6-201ENSMUST00000034776 Vmn1r195Q5SVD6 316 aa18.18■□□□□ 0.5
Cln6-201ENSMUST00000034776 Zfp92Q62396 488 aa18.18■□□□□ 0.5
Cln6-201ENSMUST00000034776 Olfr1246Q7TQZ6 314 aa18.18■□□□□ 0.5
Cln6-201ENSMUST00000034776 Glrx2Q923X4 156 aa18.18■□□□□ 0.5
Cln6-201ENSMUST00000034776 Ighv7-3A0A075B5R2 120 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 NdpP48744 131 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 GchfrP99025 84 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 Q3UUX7 111 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 Trav15-1-dv6-1Q5R1D2 117 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 Sh3bgrl2Q8BG73 107 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 Tm2d1Q99MB3 208 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 Vmn1r61W4VSP5 300 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 Svep1A2AVA0 3567 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 Olfr556E9Q549 324 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 Zfand3Q497H0 227 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 Gm12689Q8BQU9 117 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 Slc25a48Q8BW66 306 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 Gm5468Q8C3D3 155 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 Olfr1413Q8VGU3 323 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 EppinQ9DA01 134 aa18.17■□□□□ 0.5
Cln6-201ENSMUST00000034776 OtoglF7A4A7 2325 aa18.16■□□□□ 0.5
Cln6-201ENSMUST00000034776 P01792 123 aa18.16■□□□□ 0.5
Cln6-201ENSMUST00000034776 Stfa1P35175 97 aa18.16■□□□□ 0.5
Cln6-201ENSMUST00000034776 Adat3Q6PAT0 349 aa18.16■□□□□ 0.5
Cln6-201ENSMUST00000034776 Slamf7Q8BHK6 333 aa18.16■□□□□ 0.5
Cln6-201ENSMUST00000034776 Q9D8L0 127 aa18.16■□□□□ 0.5
Cln6-201ENSMUST00000034776 Gpr35Q9ES90 307 aa18.16■□□□□ 0.5
Cln6-201ENSMUST00000034776 Ctnnbip1Q9JJN6 81 aa18.16■□□□□ 0.5
Cln6-201ENSMUST00000034776 Arpc1aQ9R0Q6 370 aa18.16■□□□□ 0.5
Cln6-201ENSMUST00000034776 Pf4Q9Z126 105 aa18.16■□□□□ 0.5
Cln6-201ENSMUST00000034776 Tm4sf19E9Q9H8 206 aa18.16■□□□□ 0.5
Cln6-201ENSMUST00000034776 Cd81P35762 236 aa18.16■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 57.7 ms