RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Zfp92Q62396 488 aa8.97□□□□□ -0.97
Msh3-201ENSMUST00000022220 Higd1cQ76I25 96 aa8.97□□□□□ -0.97
Msh3-201ENSMUST00000022220 Olfr263Q7TQT8 317 aa8.97□□□□□ -0.97
Msh3-201ENSMUST00000022220 Fam206aQ80ZQ9 193 aaKnown RBP8.97□□□□□ -0.97
Msh3-201ENSMUST00000022220 EsdQ9R0P3 282 aa8.97□□□□□ -0.97
Msh3-201ENSMUST00000022220 Gata2O09100 480 aa8.97□□□□□ -0.97
Msh3-201ENSMUST00000022220 Ly6c1P0CW02 131 aa8.97□□□□□ -0.97
Msh3-201ENSMUST00000022220 Defa9P50707 93 aa8.97□□□□□ -0.97
Msh3-201ENSMUST00000022220 Tmem204Q7TQI0 226 aa8.97□□□□□ -0.97
Msh3-201ENSMUST00000022220 Tmem30bQ8BHG3 353 aa8.97□□□□□ -0.97
Msh3-201ENSMUST00000022220 Ndufa2Q9CQ75 99 aa8.97□□□□□ -0.97
Msh3-201ENSMUST00000022220 Tppp3Q9CRB6 176 aaKnown RBP8.97□□□□□ -0.97
Msh3-201ENSMUST00000022220 Spint5J3KMK8 105 aa8.96□□□□□ -0.97
Msh3-201ENSMUST00000022220 Klf12O35738 402 aa8.96□□□□□ -0.97
Msh3-201ENSMUST00000022220 Q3UZV7 1028 aa8.96□□□□□ -0.97
Msh3-201ENSMUST00000022220 Ifna14Q810G3 189 aa8.96□□□□□ -0.97
Msh3-201ENSMUST00000022220 Rpl24Q8BP67 157 aaKnown RBP8.96□□□□□ -0.97
Msh3-201ENSMUST00000022220 Cphx2Q8BX39 182 aa8.96□□□□□ -0.97
Msh3-201ENSMUST00000022220 Igkv14-100A0A0G2JG36 117 aa8.96□□□□□ -0.98
Msh3-201ENSMUST00000022220 Ube2l3P68037 154 aaKnown RBP8.96□□□□□ -0.98
Msh3-201ENSMUST00000022220 Mbnl2Q8C181 373 aaKnown RBP8.96□□□□□ -0.98
Msh3-201ENSMUST00000022220 Ncoa6Q9JL19 2067 aa8.96□□□□□ -0.98
Msh3-201ENSMUST00000022220 Igkv6-15A0A140T8M5 115 aa8.96□□□□□ -0.98
Msh3-201ENSMUST00000022220 H60bB1B212 251 aa8.96□□□□□ -0.98
Msh3-201ENSMUST00000022220 Cd209gD3Z5D4 194 aa8.96□□□□□ -0.98
Msh3-201ENSMUST00000022220 Ccdc71lE9Q4T4 218 aa8.96□□□□□ -0.98
Msh3-201ENSMUST00000022220 Defa35E9QLQ1 93 aa8.96□□□□□ -0.98
Msh3-201ENSMUST00000022220 A630076J17RikJ3QQ32 107 aa8.96□□□□□ -0.98
Msh3-201ENSMUST00000022220 Ascl5M0QWB7 188 aa8.96□□□□□ -0.98
Msh3-201ENSMUST00000022220 Slc17a2Q5SZA1 478 aa8.96□□□□□ -0.98
Msh3-201ENSMUST00000022220 SelplgQ62170 397 aa8.96□□□□□ -0.98
Msh3-201ENSMUST00000022220 Iglv1A0A075B663 117 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Gm5741B2RVA4 72 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Ifitm7G3X9Z2 141 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Ca5aP23589 299 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Rpl8P62918 257 aaKnown RBP8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Olfr149Q60888 311 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Cdkn2aQ64364 169 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Jpt2Q6PGH2 190 aaKnown RBP8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Smim12Q78RX3 92 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Znrd1Q791N7 123 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Prss41Q920S2 322 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Ndufb3Q9CQZ6 104 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Setd2E9Q5F9 2537 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Igkv5-37A0A140T8N4 115 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Olfr1331K7N684 317 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Slc25a17O70579 307 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Emp2O88662 172 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Phxr2P15972 65 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Neurog3P70661 214 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 MymxQ2Q5T5 84 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Ifna11Q61716 190 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Olfr1333Q7TQV7 317 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Arl6ip6Q8BH07 226 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Hif1anQ8BLR9 349 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 H2afb1Q9CQ70 111 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 2200002J24RikQ9D807 110 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Fam213bQ9DB60 201 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Bet1lO35153 111 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Ms4a13Q5FWC3 203 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 MiaQ61865 130 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Olfr476Q8VGI4 310 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Gtsf1Q9DAN6 167 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Timm10bQ9WV96 100 aa8.95□□□□□ -0.98
Msh3-201ENSMUST00000022220 Ighv9-2A0A0B4J1J4 117 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Gm13030A2APQ6 143 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Mmp23O88676 391 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Ssbp4Q3U4B1 363 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Lyplal1Q3UFF7 239 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Aqp6Q8C4A0 293 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Nabp2Q8R2Y9 212 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 AhspQ9CY02 102 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Fhl3Q9R059 289 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Trav17A0A075B655 113 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Gm9242J3QNY1 357 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Znf691Q3TDE8 283 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Tmem91Q8C581 172 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 RpeQ8VEE0 228 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Lypd8Q9D7S0 255 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Cd200r1Q9ES57 326 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Egr4Q9WUF2 478 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 MgaA2AWL7 3003 aaKnown RBP8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Tet2Q4JK59 1912 aaKnown RBP8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Ighv7-4A0A0A6YXL5 121 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 eef1akmt3D3YWP0 232 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Scgb1b19F6WYW0 93 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Gm15056F6ZR08 88 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Slc25a5P51881 298 aaKnown RBP8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 ApohQ01339 345 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Arrdc5Q497K5 325 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Rnf115Q9D0C1 305 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 Klk4Q9Z0M1 255 aa8.94□□□□□ -0.98
Msh3-201ENSMUST00000022220 MtorQ9JLN9 2549 aa8.93□□□□□ -0.98
Msh3-201ENSMUST00000022220 Ighv1-34A0A075B5V2 117 aa8.93□□□□□ -0.98
Msh3-201ENSMUST00000022220 Tmem262D3Z338 116 aa8.93□□□□□ -0.98
Msh3-201ENSMUST00000022220 Gm21882J3QN86 361 aa8.93□□□□□ -0.98
Msh3-201ENSMUST00000022220 Brs3O54798 399 aa8.93□□□□□ -0.98
Msh3-201ENSMUST00000022220 Lcn2P11672 200 aa8.93□□□□□ -0.98
Msh3-201ENSMUST00000022220 Rom1P32958 351 aa8.93□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms