RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Sh3bgrl2Q8BG73 107 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr1454Q8VFW2 307 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr33Q8VGX7 318 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Tax1bp3Q9DBG9 124 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Pla2g2eQ9QUL3 142 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 BatfO35284 125 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Zfp58P16372 489 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Foxc2Q61850 494 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Ube2d2bQ6ZWY6 147 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr1382Q7TQT3 311 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Vmn1r171Q9EPS6 316 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Tmub1Q9JMG3 245 aa13.24□□□□□ -0.29
Trim28-201ENSMUST00000005705 Gm28171A0A087WQ19 227 aa13.23□□□□□ -0.29
Trim28-201ENSMUST00000005705 Zfp976E9Q981 636 aa13.23□□□□□ -0.29
Trim28-201ENSMUST00000005705 Isg15Q64339 161 aaKnown RBP13.23□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr1189A2AV11 306 aa13.23□□□□□ -0.29
Trim28-201ENSMUST00000005705 Gm20825J3QM67 227 aa13.23□□□□□ -0.29
Trim28-201ENSMUST00000005705 Ssty2Q149W4 227 aa13.23□□□□□ -0.29
Trim28-201ENSMUST00000005705 G430049J08RikQ3TL09 166 aa13.23□□□□□ -0.29
Trim28-201ENSMUST00000005705 Gm21394Q497R7 227 aa13.23□□□□□ -0.29
Trim28-201ENSMUST00000005705 Gm20854Q62461 227 aa13.23□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr823Q7TRH2 315 aa13.23□□□□□ -0.29
Trim28-201ENSMUST00000005705 Gm9945Q8BNZ3 91 aa13.23□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr824Q8VFU4 315 aa13.23□□□□□ -0.29
Trim28-201ENSMUST00000005705 Plrg1Q922V4 513 aaKnown RBP13.23□□□□□ -0.29
Trim28-201ENSMUST00000005705 Edn1P22387 202 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Ube2v1Q9CZY3 147 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Gm5819E9PZ96 154 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Rpl8P62918 257 aaKnown RBP13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr1465Q7TQR2 307 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Gng5Q80SZ7 68 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Vmn1r222Q8R269 308 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Spsb4Q8R5B6 273 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr1441Q8VFV3 318 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Rnf2Q9CQJ4 336 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Fancd2osQ9D4K4 178 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Trav7-4A0A075B6C1 113 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Igkv6-15A0A140T8M5 115 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Gata3P23772 443 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 StumQ0VBF8 141 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Trav15-1-dv6-1Q5R1D2 117 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Trav7d-4Q5R1H9 113 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr476Q8VGI4 310 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 Tmem178aQ9CZ16 297 aa13.22□□□□□ -0.29
Trim28-201ENSMUST00000005705 AcacbE9Q4Z2 2448 aa13.21□□□□□ -0.29
Trim28-201ENSMUST00000005705 Rpl19P84099 196 aaKnown RBP13.21□□□□□ -0.29
Trim28-201ENSMUST00000005705 Elovl5Q8BHI7 299 aa13.21□□□□□ -0.29
Trim28-201ENSMUST00000005705 Tmem91Q8C581 172 aa13.21□□□□□ -0.29
Trim28-201ENSMUST00000005705 Lsm4Q9QXA5 137 aaKnown RBP13.21□□□□□ -0.29
Trim28-201ENSMUST00000005705 Mpdu1Q9R0Q9 247 aa13.21□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr1436A0PK57 315 aa13.21□□□□□ -0.29
Trim28-201ENSMUST00000005705 Slc16a4Q8R0M8 500 aa13.21□□□□□ -0.29
Trim28-201ENSMUST00000005705 Olfr491Q8VG06 310 aa13.21□□□□□ -0.29
Trim28-201ENSMUST00000005705 Timm10bQ9WV96 100 aa13.21□□□□□ -0.29
Trim28-201ENSMUST00000005705 Lgals1P16045 135 aaKnown RBP13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Ube2l3P68037 154 aaKnown RBP13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Jpt2Q6PGH2 190 aaKnown RBP13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 H2afb1Q9CQ70 111 aa13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Ube2cQ9D1C1 179 aa13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Dram1Q9DC58 238 aa13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Gm13030A2APQ6 143 aa13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Agr2O88312 175 aa13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Znf787Q8BIF9 381 aa13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Rnf182Q8C432 247 aa13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Tmem190Q9D2E9 166 aa13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Rnase4Q9JJH1 148 aa13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Bahcc1Q3UHR0 2643 aa13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Zc2hc1aQ8BJH1 324 aa13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Olfr266Q8VFC3 316 aa13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Cisd1Q91WS0 108 aaKnown RBP13.2□□□□□ -0.3
Trim28-201ENSMUST00000005705 Klk1b22P15948 259 aa13.19□□□□□ -0.3
Trim28-201ENSMUST00000005705 AY761185Q5ERI8 94 aa13.19□□□□□ -0.3
Trim28-201ENSMUST00000005705 Spink2Q8BMY7 86 aa13.19□□□□□ -0.3
Trim28-201ENSMUST00000005705 Col13a1Q9R1N9 751 aa13.19□□□□□ -0.3
Trim28-201ENSMUST00000005705 Vmn1r61W4VSP5 300 aa13.19□□□□□ -0.3
Trim28-201ENSMUST00000005705 Neil2Q6R2P8 329 aa13.19□□□□□ -0.3
Trim28-201ENSMUST00000005705 Hnrnpa3Q8BG05 379 aaKnown RBP13.19□□□□□ -0.3
Trim28-201ENSMUST00000005705 Q8C3M9 231 aa13.19□□□□□ -0.3
Trim28-201ENSMUST00000005705 Gm12057A0A087WR21 115 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Trav3-3Q5R1C3 114 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Plpp2Q9DAX2 276 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Trav6n-5A0A075B621 112 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Trav6-5A0A075B6B5 112 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Nat8f4G5E8L3 226 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 P01759 136 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 P01783 136 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 GchfrP99025 84 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Trav6d-4Q5R1I0 115 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Olfr148Q60887 310 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Wipf2Q6PEV3 440 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Olfr1262Q8VGN2 304 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Wisp2Q9Z0G4 251 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Trav9-1A0A075B601 112 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Ighv7-4A0A0A6YXL5 121 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 P01792 123 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Sult1a1P52840 291 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Nabp2Q8R2Y9 212 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Il25Q8VHH8 169 aa13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Ssbp1Q9CYR0 152 aaKnown RBP13.18□□□□□ -0.3
Trim28-201ENSMUST00000005705 Gm9195A0A140LHT4 2805 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms