RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C IES3Q12345 250 aa6.17□□□□□ -1.42
VPS4YPR173C SPE4Q12455 300 aa6.17□□□□□ -1.42
VPS4YPR173C CDC24P11433 854 aaPredicted RBP6.16□□□□□ -1.42
VPS4YPR173C DAL2P25335 343 aa6.16□□□□□ -1.42
VPS4YPR173C KAR9P32526 644 aa6.16□□□□□ -1.42
VPS4YPR173C MUD1P32605 298 aaKnown RBP6.16□□□□□ -1.42
VPS4YPR173C NUP120P35729 1037 aa6.16□□□□□ -1.42
VPS4YPR173C YKR015CP36111 568 aa6.16□□□□□ -1.42
VPS4YPR173C AMN1P38285 549 aaPredicted RBP6.16□□□□□ -1.42
VPS4YPR173C PCA1P38360 1216 aa6.16□□□□□ -1.42
VPS4YPR173C TRM5P38793 499 aa6.16□□□□□ -1.42
VPS4YPR173C NDT80P38830 627 aa6.16□□□□□ -1.42
VPS4YPR173C CEM1P39525 442 aa6.16□□□□□ -1.42
VPS4YPR173C NUP60P39705 539 aa6.16□□□□□ -1.42
VPS4YPR173C STL1P39932 569 aa6.16□□□□□ -1.42
VPS4YPR173C FIS1P40515 155 aa6.16□□□□□ -1.42
VPS4YPR173C AIM21P40563 679 aa6.16□□□□□ -1.42
VPS4YPR173C RSM26P47141 266 aa6.16□□□□□ -1.42
VPS4YPR173C YGR016WP53209 190 aa6.16□□□□□ -1.42
VPS4YPR173C DRN1P53255 507 aaKnown RBP6.16□□□□□ -1.42
VPS4YPR173C RPA49Q01080 415 aaPredicted RBP6.16□□□□□ -1.42
VPS4YPR173C SYT1Q06836 1226 aa6.16□□□□□ -1.42
VPS4YPR173C NOC3Q07896 663 aaPredicted RBP6.16□□□□□ -1.42
VPS4YPR173C SNX3Q08826 162 aaKnown RBP6.16□□□□□ -1.42
VPS4YPR173C YDL176WQ12027 708 aa6.16□□□□□ -1.42
VPS4YPR173C VIK1Q12045 647 aa6.16□□□□□ -1.42
VPS4YPR173C YDR018CQ12185 396 aa6.16□□□□□ -1.42
VPS4YPR173C RRP36Q12481 300 aaPredicted RBP6.16□□□□□ -1.42
VPS4YPR173C RAD10P06838 210 aa6.15□□□□□ -1.43
VPS4YPR173C SEC63P14906 663 aa6.15□□□□□ -1.43
VPS4YPR173C RRT12P25381 491 aa6.15□□□□□ -1.43
VPS4YPR173C CDC48P25694 835 aaKnown RBP6.15□□□□□ -1.43
VPS4YPR173C RPT1P33299 467 aaKnown RBP6.15□□□□□ -1.43
VPS4YPR173C UBP11P36026 717 aa6.15□□□□□ -1.43
VPS4YPR173C SRL3P36167 246 aa6.15□□□□□ -1.43
VPS4YPR173C ETR1P38071 380 aa6.15□□□□□ -1.43
VPS4YPR173C YBL028CP38202 106 aa6.15□□□□□ -1.43
VPS4YPR173C MSC7P38694 644 aa6.15□□□□□ -1.43
VPS4YPR173C ARG2P40360 574 aa6.15□□□□□ -1.43
VPS4YPR173C YJL107CP42947 387 aa6.15□□□□□ -1.43
VPS4YPR173C CTR1P49573 406 aa6.15□□□□□ -1.43
VPS4YPR173C NUT1P53114 1132 aa6.15□□□□□ -1.43
VPS4YPR173C SOL4P53315 255 aa6.15□□□□□ -1.43
VPS4YPR173C ADE12P80210 433 aaKnown RBP6.15□□□□□ -1.43
VPS4YPR173C ADE13Q05911 482 aaKnown RBP6.15□□□□□ -1.43
VPS4YPR173C BCP1Q06338 283 aa6.15□□□□□ -1.43
VPS4YPR173C WHI4Q07655 649 aaKnown RBP6.15□□□□□ -1.43
VPS4YPR173C NSE1Q07913 336 aa6.15□□□□□ -1.43
VPS4YPR173C GAS5Q08193 484 aa6.15□□□□□ -1.43
VPS4YPR173C MET7Q08645 548 aa6.15□□□□□ -1.43
VPS4YPR173C FAP7Q12055 197 aaPredicted RBP6.15□□□□□ -1.43
VPS4YPR173C MDM20Q12387 796 aaKnown RBP6.15□□□□□ -1.43
VPS4YPR173C ADP1P25371 1049 aa6.14□□□□□ -1.43
VPS4YPR173C URA7P28274 579 aaKnown RBP6.14□□□□□ -1.43
VPS4YPR173C DGR2P32330 852 aa6.14□□□□□ -1.43
VPS4YPR173C SIP2P34164 415 aaKnown RBP6.14□□□□□ -1.43
VPS4YPR173C PIN4P34217 668 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
VPS4YPR173C MRX3P38172 270 aa6.14□□□□□ -1.43
VPS4YPR173C CPR7P47103 393 aa6.14□□□□□ -1.43
VPS4YPR173C LYS5P50113 272 aa6.14□□□□□ -1.43
VPS4YPR173C MRM2P53123 320 aa6.14□□□□□ -1.43
VPS4YPR173C NMA2P53204 395 aa6.14□□□□□ -1.43
VPS4YPR173C BIO4P53630 237 aa6.14□□□□□ -1.43
VPS4YPR173C TMA20P89886 181 aaPredicted RBP6.14□□□□□ -1.43
VPS4YPR173C ULP1Q02724 621 aa6.14□□□□□ -1.43
VPS4YPR173C THI7Q05998 598 aa6.14□□□□□ -1.43
VPS4YPR173C RSC2Q06488 889 aa6.14□□□□□ -1.43
VPS4YPR173C YET3Q07451 203 aa6.14□□□□□ -1.43
VPS4YPR173C ADY3Q07732 790 aa6.14□□□□□ -1.43
VPS4YPR173C YPR202WQ08993 238 aa6.14□□□□□ -1.43
VPS4YPR173C LAP2Q10740 671 aa6.14□□□□□ -1.43
VPS4YPR173C RRG1Q12167 365 aaPredicted RBP6.14□□□□□ -1.43
VPS4YPR173C GRX6Q12438 231 aa6.14□□□□□ -1.43
VPS4YPR173C GSC2P40989 1895 aa6.14□□□□□ -1.43
VPS4YPR173C BI2P03873 423 aa6.13□□□□□ -1.43
VPS4YPR173C BI4P03879 638 aa6.13□□□□□ -1.43
VPS4YPR173C IDI1P15496 288 aa6.13□□□□□ -1.43
VPS4YPR173C PDC5P16467 563 aaKnown RBP6.13□□□□□ -1.43
VPS4YPR173C EST1P17214 699 aaPredicted RBP6.13□□□□□ -1.43
VPS4YPR173C RNR1P21524 888 aaKnown RBP6.13□□□□□ -1.43
VPS4YPR173C DPB2P24482 689 aaPredicted RBP6.13□□□□□ -1.43
VPS4YPR173C GBP2P25555 427 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43 RIP-Chip
VPS4YPR173C RAD14P28519 371 aa6.13□□□□□ -1.43
VPS4YPR173C RAD16P31244 790 aa6.13□□□□□ -1.43
VPS4YPR173C NPL6P32832 435 aa6.13□□□□□ -1.43
VPS4YPR173C NUF2P33895 451 aa6.13□□□□□ -1.43
VPS4YPR173C ATG19P35193 415 aa6.13□□□□□ -1.43
VPS4YPR173C ARB1P40024 610 aaKnown RBP6.13□□□□□ -1.43
VPS4YPR173C TMN3P40071 706 aa6.13□□□□□ -1.43
VPS4YPR173C FTR1P40088 404 aa6.13□□□□□ -1.43
VPS4YPR173C TMA108P40462 946 aa6.13□□□□□ -1.43
VPS4YPR173C CAB2P40506 365 aa6.13□□□□□ -1.43
VPS4YPR173C MAM33P40513 266 aa6.13□□□□□ -1.43
VPS4YPR173C SAD1P43589 448 aa6.13□□□□□ -1.43
VPS4YPR173C YJL045WP47052 634 aa6.13□□□□□ -1.43
VPS4YPR173C NOP9P47077 666 aaKnown RBP6.13□□□□□ -1.43
VPS4YPR173C LYS4P49367 693 aaPredicted RBP6.13□□□□□ -1.43
VPS4YPR173C TEL2P53038 688 aa6.13□□□□□ -1.43
VPS4YPR173C LIF1P53150 421 aa6.13□□□□□ -1.43
VPS4YPR173C TAM41P53230 385 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms