RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	YPT10	P38146	199 aa		2.92	□□□□□ -1.94
YPR039W	YPR039W	PAF1	P38351	445 aa		2.92	□□□□□ -1.94
YPR039W	YPR039W	MEP2	P41948	499 aa		2.92	□□□□□ -1.94
YPR039W	YPR039W	BST1	P43571	1029 aa		2.92	□□□□□ -1.94
YPR039W	YPR039W	YFL015C	P43578	164 aa		2.92	□□□□□ -1.94
YPR039W	YPR039W	SAP4	P53036	818 aa		2.92	□□□□□ -1.94
YPR039W	YPR039W	MNT2	P53059	558 aa		2.92	□□□□□ -1.94
YPR039W	YPR039W	PEX15	Q08215	383 aa		2.92	□□□□□ -1.94
YPR039W	YPR039W	YMR084W	A2P2R3	262 aa		2.91	□□□□□ -1.94
YPR039W	YPR039W	BET2	P20133	325 aa		2.91	□□□□□ -1.94
YPR039W	YPR039W	RNR3	P21672	869 aa	Known RBP	2.91	□□□□□ -1.94
YPR039W	YPR039W	MRC1	P25588	1096 aa		2.91	□□□□□ -1.94
YPR039W	YPR039W	PLC1	P32383	869 aa		2.91	□□□□□ -1.94
YPR039W	YPR039W	RPC34	P32910	317 aa		2.91	□□□□□ -1.94
YPR039W	YPR039W	TFC4	P33339	1025 aa		2.91	□□□□□ -1.94
YPR039W	YPR039W	ENP1	P38333	483 aa	Known RBP	2.91	□□□□□ -1.94
YPR039W	YPR039W	STL1	P39932	569 aa		2.91	□□□□□ -1.94
YPR039W	YPR039W	PEX14	P53112	341 aa		2.91	□□□□□ -1.94
YPR039W	YPR039W	RSC9	Q03124	581 aa		2.91	□□□□□ -1.94
YPR039W	YPR039W	RTK1	Q12100	620 aa	Predicted RBP	2.91	□□□□□ -1.94
YPR039W	YPR039W	HOS1	Q12214	470 aa		2.91	□□□□□ -1.94
YPR039W	YPR039W	SSB1	P11484	613 aa	Known RBP	2.9	□□□□□ -1.95
YPR039W	YPR039W	ARG1	P22768	420 aa		2.9	□□□□□ -1.95
YPR039W	YPR039W	PET309	P32522	965 aa	Predicted RBP	2.9	□□□□□ -1.95
YPR039W	YPR039W	SSP120	P39931	234 aa	Known RBP	2.9	□□□□□ -1.95
YPR039W	YPR039W	SSB2	P40150	613 aa	Known RBP	2.9	□□□□□ -1.95
YPR039W	YPR039W	MAD2	P40958	196 aa		2.9	□□□□□ -1.95
YPR039W	YPR039W	STB2	P46679	850 aa		2.9	□□□□□ -1.95
YPR039W	YPR039W	YNR071C	P53757	342 aa		2.9	□□□□□ -1.95
YPR039W	YPR039W	FOL1	P53848	824 aa		2.9	□□□□□ -1.95
YPR039W	YPR039W	WAR1	Q03631	944 aa		2.9	□□□□□ -1.95
YPR039W	YPR039W	PHM6	Q05637	104 aa		2.9	□□□□□ -1.95
YPR039W	YPR039W	SLX4	Q12098	748 aa		2.9	□□□□□ -1.95
YPR039W	YPR039W	URA3	P03962	267 aa		2.89	□□□□□ -1.95
YPR039W	YPR039W	AAC1	P04710	309 aa		2.89	□□□□□ -1.95
YPR039W	YPR039W	YPK1	P12688	680 aa	Known RBP	2.89	□□□□□ -1.95
YPR039W	YPR039W	YIL092W	P40497	633 aa		2.89	□□□□□ -1.95
YPR039W	YPR039W	OPT1	P40897	799 aa		2.89	□□□□□ -1.95
YPR039W	YPR039W	ERG13	P54839	491 aa	Known RBP	2.89	□□□□□ -1.95
YPR039W	YPR039W	IRC3	Q06683	689 aa		2.89	□□□□□ -1.95
YPR039W	YPR039W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.89	□□□□□ -1.95	not detected
YPR039W	YPR039W	DIN7	Q12086	430 aa		2.89	□□□□□ -1.95
YPR039W	YPR039W	PSF3	Q12146	194 aa		2.89	□□□□□ -1.95
YPR039W	YPR039W	CBP3	P21560	335 aa		2.88	□□□□□ -1.95
YPR039W	YPR039W	URE2	P23202	354 aa	Known RBP	2.88	□□□□□ -1.95
YPR039W	YPR039W	CDC5	P32562	705 aa		2.88	□□□□□ -1.95
YPR039W	YPR039W	APD1	P38281	316 aa		2.88	□□□□□ -1.95
YPR039W	YPR039W	STB5	P38699	743 aa		2.88	□□□□□ -1.95
YPR039W	YPR039W	IRC8	P47046	822 aa		2.88	□□□□□ -1.95
YPR039W	YPR039W	COS12	P53053	380 aa		2.88	□□□□□ -1.95
YPR039W	YPR039W	CRT10	Q08226	957 aa		2.88	□□□□□ -1.95
YPR039W	YPR039W	YMR085W	P0CF18	432 aa		2.87	□□□□□ -1.95
YPR039W	YPR039W	SDH8	P38345	138 aa		2.87	□□□□□ -1.95
YPR039W	YPR039W	TDA10	P42938	290 aa		2.87	□□□□□ -1.95
YPR039W	YPR039W	GSM1	P42950	618 aa		2.87	□□□□□ -1.95
YPR039W	YPR039W	SNO3	P43544	222 aa		2.87	□□□□□ -1.95
YPR039W	YPR039W	SCW4	P53334	386 aa	Known RBP	2.87	□□□□□ -1.95
YPR039W	YPR039W	TRI1	Q05024	226 aa		2.87	□□□□□ -1.95
YPR039W	YPR039W	PCL8	Q08966	492 aa		2.87	□□□□□ -1.95
YPR039W	YPR039W	DBP10	Q12389	995 aa	Known RBP	2.87	□□□□□ -1.95
YPR039W	YPR039W	AHA1	Q12449	350 aa	Known RBP	2.87	□□□□□ -1.95
YPR039W	YPR039W	YLR111W	Q12528	110 aa		2.87	□□□□□ -1.95
YPR039W	YPR039W	YAP1	P19880	650 aa	Known RBP	2.86	□□□□□ -1.95
YPR039W	YPR039W	PHO3	P24031	467 aa		2.86	□□□□□ -1.95
YPR039W	YPR039W	GSY2	P27472	705 aa		2.86	□□□□□ -1.95
YPR039W	YPR039W	TGL1	P34163	548 aa		2.86	□□□□□ -1.95
YPR039W	YPR039W	SDS22	P36047	338 aa		2.86	□□□□□ -1.95
YPR039W	YPR039W	SCS2	P40075	244 aa	Known RBP	2.86	□□□□□ -1.95
YPR039W	YPR039W	YNL092W	P53934	400 aa		2.86	□□□□□ -1.95
YPR039W	YPR039W	NUR1	Q12066	484 aa		2.86	□□□□□ -1.95
YPR039W	YPR039W	RDL1	Q12305	139 aa	Known RBP	2.86	□□□□□ -1.95
YPR039W	YPR039W	VAS1	P07806	1104 aa	Known RBP	2.85	□□□□□ -1.95
YPR039W	YPR039W	PRP45	P28004	379 aa	Predicted RBP	2.85	□□□□□ -1.95
YPR039W	YPR039W	YJU2	P28320	278 aa	Predicted RBP	2.85	□□□□□ -1.95
YPR039W	YPR039W	TAF5	P38129	798 aa		2.85	□□□□□ -1.95
YPR039W	YPR039W	SAW1	P39735	261 aa		2.85	□□□□□ -1.95
YPR039W	YPR039W	JHD1	P40034	492 aa		2.85	□□□□□ -1.95
YPR039W	YPR039W	SAE2	P46946	345 aa		2.85	□□□□□ -1.95
YPR039W	YPR039W	IDS2	P46958	469 aa		2.85	□□□□□ -1.95
YPR039W	YPR039W	PUS4	P48567	403 aa	Known RBP	2.85	□□□□□ -1.95
YPR039W	YPR039W	CNM67	P53865	581 aa	Known RBP	2.85	□□□□□ -1.95
YPR039W	YPR039W	IDP3	P53982	420 aa	Known RBP	2.85	□□□□□ -1.95
YPR039W	YPR039W	BSP1	Q06604	576 aa		2.85	□□□□□ -1.95
YPR039W	YPR039W	HER1	Q12276	1246 aa		2.85	□□□□□ -1.95
YPR039W	YPR039W	CRC1	Q12289	327 aa		2.85	□□□□□ -1.95
YPR039W	YPR039W	GDA1	P32621	518 aa		2.84	□□□□□ -1.95
YPR039W	YPR039W	MTG2	P38860	518 aa		2.84	□□□□□ -1.95
YPR039W	YPR039W	LNP1	P38878	278 aa		2.84	□□□□□ -1.95
YPR039W	YPR039W	RRP8	P38961	392 aa	Known RBP	2.84	□□□□□ -1.95
YPR039W	YPR039W	MAM1	P40065	302 aa		2.84	□□□□□ -1.95
YPR039W	YPR039W	VFA1	P40080	203 aa		2.84	□□□□□ -1.95
YPR039W	YPR039W	LAS21	P40367	830 aa		2.84	□□□□□ -1.95
YPR039W	YPR039W	MNT3	P40549	630 aa		2.84	□□□□□ -1.95
YPR039W	YPR039W	RAD33	Q04231	177 aa		2.84	□□□□□ -1.95
YPR039W	YPR039W	ENT2	Q05785	613 aa		2.84	□□□□□ -1.95
YPR039W	YPR039W	HRD3	Q05787	833 aa		2.84	□□□□□ -1.95
YPR039W	YPR039W	SPN1	Q06505	410 aa	Predicted RBP	2.84	□□□□□ -1.95
YPR039W	YPR039W	CYK3	Q07533	885 aa		2.84	□□□□□ -1.95
YPR039W	YPR039W	BI2	P03873	423 aa		2.83	□□□□□ -1.96
YPR039W	YPR039W	CHO2	P05374	869 aa	Known RBP	2.83	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms