RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W FTR1P40088 404 aa3.46□□□□□ -1.86
MRPL40YPL173W SPO1P53541 631 aa3.46□□□□□ -1.86
MRPL40YPL173W TRS130Q03660 1102 aa3.46□□□□□ -1.86
MRPL40YPL173W TRI1Q05024 226 aa3.46□□□□□ -1.86
MRPL40YPL173W USV1Q12132 391 aa3.46□□□□□ -1.86
MRPL40YPL173W FEN2P25621 512 aaKnown RBP3.45□□□□□ -1.86
MRPL40YPL173W MSS1P32559 526 aaPredicted RBP3.45□□□□□ -1.86
MRPL40YPL173W FRD1P32614 470 aaKnown RBP3.45□□□□□ -1.86
MRPL40YPL173W BCS1P32839 456 aa3.45□□□□□ -1.86
MRPL40YPL173W YLF2P38746 405 aa3.45□□□□□ -1.86
MRPL40YPL173W VID27P40157 782 aa3.45□□□□□ -1.86
MRPL40YPL173W CPR6P53691 371 aaKnown RBP3.45□□□□□ -1.86
MRPL40YPL173W ARC35P53731 342 aaKnown RBP3.45□□□□□ -1.86
MRPL40YPL173W YFT2Q06676 274 aa3.45□□□□□ -1.86
MRPL40YPL173W YCG1Q06680 1035 aa3.45□□□□□ -1.86
MRPL40YPL173W RPS9BP05755 195 aaKnown RBP3.44□□□□□ -1.86
MRPL40YPL173W STE12P13574 688 aa3.44□□□□□ -1.86
MRPL40YPL173W NCP1P16603 691 aaKnown RBP3.44□□□□□ -1.86
MRPL40YPL173W SAT4P25333 603 aaKnown RBP3.44□□□□□ -1.86
MRPL40YPL173W BEM3P32873 1128 aa3.44□□□□□ -1.86
MRPL40YPL173W EHT1P38295 451 aa3.44□□□□□ -1.86
MRPL40YPL173W COS111P38308 924 aa3.44□□□□□ -1.86
MRPL40YPL173W YIL077CP40508 320 aa3.44□□□□□ -1.86
MRPL40YPL173W RFX1P48743 811 aa3.44□□□□□ -1.86
MRPL40YPL173W SQS1P53866 767 aaKnown RBP3.44□□□□□ -1.86
MRPL40YPL173W GTR1Q00582 310 aa3.44□□□□□ -1.86
MRPL40YPL173W STP1Q00947 519 aa3.44□□□□□ -1.86
MRPL40YPL173W TFC6Q06339 672 aa3.44□□□□□ -1.86
MRPL40YPL173W DIA2Q08496 732 aaPredicted RBP3.44□□□□□ -1.86
MRPL40YPL173W SSP2Q08646 371 aa3.44□□□□□ -1.86
MRPL40YPL173W ADE5,7P07244 802 aaKnown RBP3.43□□□□□ -1.86
MRPL40YPL173W SIR1P21691 654 aa3.43□□□□□ -1.86
MRPL40YPL173W MCM3P24279 971 aaKnown RBP3.43□□□□□ -1.86
MRPL40YPL173W YCL049CP25577 312 aa3.43□□□□□ -1.86
MRPL40YPL173W YMC1P32331 307 aa3.43□□□□□ -1.86
MRPL40YPL173W SSH4P32343 579 aa3.43□□□□□ -1.86
MRPL40YPL173W YMC2P38087 329 aa3.43□□□□□ -1.86
MRPL40YPL173W TAF5P38129 798 aa3.43□□□□□ -1.86
MRPL40YPL173W MIT1P40002 666 aa3.43□□□□□ -1.86
MRPL40YPL173W PUG1P40100 303 aa3.43□□□□□ -1.86
MRPL40YPL173W VPS27P40343 622 aaKnown RBP3.43□□□□□ -1.86
MRPL40YPL173W GSM1P42950 618 aa3.43□□□□□ -1.86
MRPL40YPL173W TAX4P47030 604 aa3.43□□□□□ -1.86
MRPL40YPL173W BNA1P47096 177 aa3.43□□□□□ -1.86
MRPL40YPL173W ACS1Q01574 713 aa3.43□□□□□ -1.86
MRPL40YPL173W TIM50Q02776 476 aa3.43□□□□□ -1.86
MRPL40YPL173W FDC1Q03034 503 aa3.43□□□□□ -1.86
MRPL40YPL173W BLS1Q06071 122 aa3.43□□□□□ -1.86
MRPL40YPL173W AAD4Q07747 329 aa3.43□□□□□ -1.86
MRPL40YPL173W CHS5Q12114 671 aaKnown RBP3.43□□□□□ -1.86
MRPL40YPL173W ZRT2Q12436 422 aa3.43□□□□□ -1.86
MRPL40YPL173W PHO5P00635 467 aa3.42□□□□□ -1.86
MRPL40YPL173W MTF2P10849 440 aa3.42□□□□□ -1.86
MRPL40YPL173W SWI4P25302 1093 aaKnown RBP3.42□□□□□ -1.86
MRPL40YPL173W PRP45P28004 379 aaPredicted RBP3.42□□□□□ -1.86
MRPL40YPL173W UGP1P32861 499 aaKnown RBP3.42□□□□□ -1.86
MRPL40YPL173W PSY4P38193 441 aa3.42□□□□□ -1.86
MRPL40YPL173W YBR138CP38277 524 aa3.42□□□□□ -1.86
MRPL40YPL173W TMN3P40071 706 aa3.42□□□□□ -1.86
MRPL40YPL173W ULP2P40537 1034 aaPredicted RBP3.42□□□□□ -1.86
MRPL40YPL173W TMA64Q04600 565 aaKnown RBP3.42□□□□□ -1.86
MRPL40YPL173W ARR3Q06598 404 aa3.42□□□□□ -1.86
MRPL40YPL173W HOS1Q12214 470 aa3.42□□□□□ -1.86
MRPL40YPL173W POL3P15436 1097 aa3.41□□□□□ -1.86
MRPL40YPL173W PRP28P23394 588 aa3.41□□□□□ -1.86
MRPL40YPL173W PIG2P40187 538 aa3.41□□□□□ -1.86
MRPL40YPL173W LRO1P40345 661 aa3.41□□□□□ -1.86
MRPL40YPL173W POL31P46957 487 aa3.41□□□□□ -1.86
MRPL40YPL173W MPS3P47069 682 aa3.41□□□□□ -1.86
MRPL40YPL173W RRT6P53117 311 aaPredicted RBP3.41□□□□□ -1.86
MRPL40YPL173W IWR1Q07532 353 aaPredicted RBP3.41□□□□□ -1.86
MRPL40YPL173W CRD1Q07560 283 aa3.41□□□□□ -1.86
MRPL40YPL173W AIM41Q12032 185 aa3.41□□□□□ -1.86
MRPL40YPL173W CLF1Q12309 687 aaPredicted RBP3.41□□□□□ -1.86
MRPL40YPL173W TUF1P02992 437 aaKnown RBP3.4□□□□□ -1.87
MRPL40YPL173W ADE3P07245 946 aaKnown RBP3.4□□□□□ -1.87
MRPL40YPL173W UBC1P21734 215 aaKnown RBP3.4□□□□□ -1.87
MRPL40YPL173W SEC15P22224 910 aa3.4□□□□□ -1.87
MRPL40YPL173W MCM10P32354 571 aa3.4□□□□□ -1.87
MRPL40YPL173W KHA1P40309 873 aa3.4□□□□□ -1.87
MRPL40YPL173W IML2P47031 731 aa3.4□□□□□ -1.87
MRPL40YPL173W MDR1P53258 950 aa3.4□□□□□ -1.87
MRPL40YPL173W TRS31Q03337 283 aa3.4□□□□□ -1.87
MRPL40YPL173W ENT2Q05785 613 aa3.4□□□□□ -1.87
MRPL40YPL173W IZH3Q07959 543 aa3.4□□□□□ -1.87
MRPL40YPL173W BIK1P11709 440 aa3.39□□□□□ -1.87
MRPL40YPL173W VPS33P20795 691 aa3.39□□□□□ -1.87
MRPL40YPL173W RIT1P23796 513 aa3.39□□□□□ -1.87
MRPL40YPL173W CLB4P24871 460 aa3.39□□□□□ -1.87
MRPL40YPL173W XRS2P33301 854 aa3.39□□□□□ -1.87
MRPL40YPL173W IFA38P38286 347 aa3.39□□□□□ -1.87
MRPL40YPL173W STB5P38699 743 aa3.39□□□□□ -1.87
MRPL40YPL173W PSA1P41940 361 aaKnown RBP3.39□□□□□ -1.87
MRPL40YPL173W IRC8P47046 822 aa3.39□□□□□ -1.87
MRPL40YPL173W ASN1P49089 572 aaKnown RBP3.39□□□□□ -1.87
MRPL40YPL173W IMA1P53051 589 aa3.39□□□□□ -1.87
MRPL40YPL173W YGR054WP53235 642 aaKnown RBP3.39□□□□□ -1.87
MRPL40YPL173W MEP3P53390 489 aa3.39□□□□□ -1.87
MRPL40YPL173W MRPL13Q02204 264 aa3.39□□□□□ -1.87
MRPL40YPL173W NEW1Q08972 1196 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms