RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	YDL183C	P48569	320 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	APT1	P49435	187 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	COS6	P53344	381 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	TOF1	P53840	1238 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	HDA1	P53973	706 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	BNA7	Q04066	261 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	ESF1	Q06344	628 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	GYP1	Q08484	637 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	DDC1	Q08949	612 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	NEW1	Q08972	1196 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	YDL109C	Q12103	647 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	GET4	Q12125	312 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	MCM16	Q12262	181 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	EMP46	Q12396	444 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	YLR278C	Q05854	1341 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	YCF1	P39109	1515 aa	Known RBP	4.54	□□□□□ -1.68
TRM44	YPL030W	ENO1	P00924	437 aa	Known RBP	4.54	□□□□□ -1.68
TRM44	YPL030W	ENO2	P00925	437 aa	Known RBP	4.54	□□□□□ -1.68
TRM44	YPL030W	RPL25	P04456	142 aa	Known RBP	4.54	□□□□□ -1.68
TRM44	YPL030W	ARG81	P05085	880 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	ERG12	P07277	443 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	GPA2	P10823	449 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	WHI2	P12611	486 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	SCJ1	P25303	377 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	SEC1	P30619	724 aa	Known RBP	4.54	□□□□□ -1.68
TRM44	YPL030W	EFT1	P32324	842 aa	Known RBP	4.54	□□□□□ -1.68
TRM44	YPL030W	WHI3	P34761	661 aa	Known RBP	4.54	□□□□□ -1.68
TRM44	YPL030W	NAT2	P37293	288 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	IMD2	P38697	523 aa	Known RBP	4.54	□□□□□ -1.68
TRM44	YPL030W	AIM9	P40053	627 aa	Known RBP	4.54	□□□□□ -1.68
TRM44	YPL030W	NDE1	P40215	560 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	ALG5	P40350	334 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	RFX1	P48743	811 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	PIP2	P52960	996 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	OKP1	P53298	406 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	VAC7	P53950	1165 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	PET117	Q02771	107 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	MMT1	Q03218	510 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	HMO1	Q03973	246 aa	Known RBP	4.54	□□□□□ -1.68
TRM44	YPL030W	RTT103	Q05543	409 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	GLO2	Q05584	274 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	COA4	Q05809	96 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	GMC2	Q06201	188 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	BUD20	Q08004	166 aa	Predicted RBP	4.54	□□□□□ -1.68
TRM44	YPL030W	AIM41	Q12032	185 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	ATG29	Q12092	213 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	SPO21	Q12411	609 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	NSI1	Q12457	570 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	YCL001W-B	Q96VH2	84 aa		4.54	□□□□□ -1.68
TRM44	YPL030W	TRP3	P00937	484 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	HXK1	P04806	485 aa	Known RBP	4.53	□□□□□ -1.68
TRM44	YPL030W	FBP1	P09201	348 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	GSY1	P23337	708 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	VMA16	P23968	213 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	PRD1	P25375	712 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	YDJ1	P25491	409 aa	Known RBP	4.53	□□□□□ -1.68
TRM44	YPL030W	CDC15	P27636	974 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	PEP3	P27801	918 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	PYC2	P32327	1180 aa	Known RBP	4.53	□□□□□ -1.68
TRM44	YPL030W	NUP133	P36161	1157 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	CHK1	P38147	527 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
TRM44	YPL030W	GIP1	P38229	639 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	BSD2	P38356	321 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	SPF1	P39986	1215 aa	Known RBP	4.53	□□□□□ -1.68
TRM44	YPL030W	BUD16	P39988	312 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	AIM24	P47127	394 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	THI11	P47183	340 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	YGL117W	P53133	265 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	YNL115C	P53925	644 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	TMA20	P89886	181 aa	Predicted RBP	4.53	□□□□□ -1.68
TRM44	YPL030W	ACS1	Q01574	713 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	MAK10	Q02197	733 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	FOX2	Q02207	900 aa	Known RBP	4.53	□□□□□ -1.68
TRM44	YPL030W	SLU7	Q02775	382 aa	Known RBP	4.53	□□□□□ -1.68
TRM44	YPL030W	DUS3	Q06053	668 aa	Known RBP	4.53	□□□□□ -1.68
TRM44	YPL030W	YLR001C	Q07895	862 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	SSP2	Q08646	371 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	TAF10	Q12030	206 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	POM152	P39685	1337 aa		4.53	□□□□□ -1.68
TRM44	YPL030W	TRP2	P00899	507 aa	Known RBP	4.52	□□□□□ -1.69
TRM44	YPL030W	BI4	P03879	638 aa		4.52	□□□□□ -1.69
TRM44	YPL030W	STF2	P16965	84 aa		4.52	□□□□□ -1.69
TRM44	YPL030W	PRP4	P20053	465 aa	Known RBP	4.52	□□□□□ -1.69
TRM44	YPL030W	AEP2	P22136	580 aa		4.52	□□□□□ -1.69
TRM44	YPL030W	SLY41	P22215	453 aa		4.52	□□□□□ -1.69
TRM44	YPL030W	PRP28	P23394	588 aa		4.52	□□□□□ -1.69
TRM44	YPL030W	YJU3	P28321	313 aa		4.52	□□□□□ -1.69
TRM44	YPL030W	GCD11	P32481	527 aa	Known RBP	4.52	□□□□□ -1.69
TRM44	YPL030W	SUV3	P32580	737 aa		4.52	□□□□□ -1.69
TRM44	YPL030W	MGM101	P32787	269 aa	Known RBP	4.52	□□□□□ -1.69
TRM44	YPL030W	MDJ1	P35191	511 aa		4.52	□□□□□ -1.69
TRM44	YPL030W	MAL33	P38157	468 aa		4.52	□□□□□ -1.69
TRM44	YPL030W	BMT2	P38278	337 aa		4.52	□□□□□ -1.69
TRM44	YPL030W	COS111	P38308	924 aa		4.52	□□□□□ -1.69
TRM44	YPL030W	YBR287W	P38355	427 aa		4.52	□□□□□ -1.69
TRM44	YPL030W	SBE22	P38814	852 aa		4.52	□□□□□ -1.69
TRM44	YPL030W	SAW1	P39735	261 aa		4.52	□□□□□ -1.69
TRM44	YPL030W	RSP5	P39940	809 aa	Known RBP	4.52	□□□□□ -1.69
TRM44	YPL030W	AST2	P39945	430 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms