RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W URA4P20051 364 aa3.83□□□□□ -1.8
SWI1YPL016W HXT2P23585 541 aa3.83□□□□□ -1.8
SWI1YPL016W SPT10P35208 640 aa3.83□□□□□ -1.8
SWI1YPL016W HES1P35843 434 aa3.83□□□□□ -1.8
SWI1YPL016W RTT105P40063 208 aa3.83□□□□□ -1.8
SWI1YPL016W YJR054WP47114 497 aa3.83□□□□□ -1.8
SWI1YPL016W MSE1P48525 536 aa3.83□□□□□ -1.8
SWI1YPL016W YGR016WP53209 190 aa3.83□□□□□ -1.8
SWI1YPL016W ADE16P54113 591 aaKnown RBP3.83□□□□□ -1.8
SWI1YPL016W CIK1Q01649 594 aa3.83□□□□□ -1.8
SWI1YPL016W BUL2Q03758 920 aaKnown RBP3.83□□□□□ -1.8
SWI1YPL016W MYO5Q04439 1219 aaKnown RBP3.83□□□□□ -1.8
SWI1YPL016W RRN11Q04712 507 aa3.83□□□□□ -1.8
SWI1YPL016W TSR1Q07381 788 aaKnown RBP3.83□□□□□ -1.8
SWI1YPL016W MAM3Q12296 706 aa3.83□□□□□ -1.8
SWI1YPL016W MED4Q12343 284 aa3.83□□□□□ -1.8
SWI1YPL016W NUC1P08466 329 aa3.83□□□□□ -1.8
SWI1YPL016W STE12P13574 688 aa3.83□□□□□ -1.8
SWI1YPL016W RPC34P32910 317 aa3.83□□□□□ -1.8
SWI1YPL016W YBL055CP34220 418 aaPredicted RBP3.83□□□□□ -1.8
SWI1YPL016W APE4P38821 490 aa3.83□□□□□ -1.8
SWI1YPL016W GEM1P39722 662 aa3.83□□□□□ -1.8
SWI1YPL016W ENP2P48234 707 aaKnown RBP3.83□□□□□ -1.8
SWI1YPL016W MNN10P50108 393 aaKnown RBP3.83□□□□□ -1.8
SWI1YPL016W MPS2P53159 387 aa3.83□□□□□ -1.8
SWI1YPL016W EMG1Q06287 252 aaKnown RBP3.83□□□□□ -1.8
SWI1YPL016W YEH1Q07804 573 aa3.83□□□□□ -1.8
SWI1YPL016W NTG2Q08214 380 aa3.83□□□□□ -1.8
SWI1YPL016W TUM1Q08686 304 aaKnown RBP3.83□□□□□ -1.8
SWI1YPL016W BMT6Q12291 365 aa3.83□□□□□ -1.8
SWI1YPL016W RRP36Q12481 300 aaPredicted RBP3.83□□□□□ -1.8
SWI1YPL016W RPB2P08518 1224 aaKnown RBP3.82□□□□□ -1.8
SWI1YPL016W MER1P16523 270 aa3.82□□□□□ -1.8
SWI1YPL016W SIP2P34164 415 aaKnown RBP3.82□□□□□ -1.8
SWI1YPL016W TOD6P34219 525 aa3.82□□□□□ -1.8
SWI1YPL016W MRP8P35719 219 aa3.82□□□□□ -1.8
SWI1YPL016W SPC42P36094 363 aa3.82□□□□□ -1.8
SWI1YPL016W YDR089WP38966 869 aa3.82□□□□□ -1.8
SWI1YPL016W ALG5P40350 334 aa3.82□□□□□ -1.8
SWI1YPL016W PTK2P47116 818 aaKnown RBP3.82□□□□□ -1.8
SWI1YPL016W MAL11P53048 616 aa3.82□□□□□ -1.8
SWI1YPL016W SNX41Q04053 625 aa3.82□□□□□ -1.8
SWI1YPL016W YPL216WQ08964 1102 aa3.82□□□□□ -1.8
SWI1YPL016W THI21Q08975 551 aa3.82□□□□□ -1.8
SWI1YPL016W SSF2Q12153 453 aaPredicted RBP3.82□□□□□ -1.8
SWI1YPL016W HAL9Q12180 1030 aa3.82□□□□□ -1.8
SWI1YPL016W TSC13Q99190 310 aa3.82□□□□□ -1.8
SWI1YPL016W ATP2P00830 511 aaKnown RBP3.82□□□□□ -1.8
SWI1YPL016W KAR2P16474 682 aaKnown RBP3.82□□□□□ -1.8
SWI1YPL016W SDH2P21801 266 aa3.82□□□□□ -1.8
SWI1YPL016W NGR1P32831 672 aaKnown RBP3.82□□□□□ -1.8
SWI1YPL016W PGM1P33401 570 aaKnown RBP3.82□□□□□ -1.8
SWI1YPL016W BCH2P36122 765 aa3.82□□□□□ -1.8
SWI1YPL016W MSC7P38694 644 aa3.82□□□□□ -1.8
SWI1YPL016W MIP6P38760 659 aaKnown RBP3.82□□□□□ -1.8
SWI1YPL016W CTM1P38818 585 aa3.82□□□□□ -1.8
SWI1YPL016W LNP1P38878 278 aa3.82□□□□□ -1.8
SWI1YPL016W RTS2P40962 232 aa3.82□□□□□ -1.8
SWI1YPL016W GPI8P49018 411 aa3.82□□□□□ -1.8
SWI1YPL016W CAF40P53829 373 aa3.82□□□□□ -1.8
SWI1YPL016W VAC7P53950 1165 aa3.82□□□□□ -1.8
SWI1YPL016W RAD30Q04049 632 aa3.82□□□□□ -1.8
SWI1YPL016W MTF2P10849 440 aa3.82□□□□□ -1.8
SWI1YPL016W HMG2P12684 1045 aa3.82□□□□□ -1.8
SWI1YPL016W SAN1P22470 610 aa3.82□□□□□ -1.8
SWI1YPL016W SIN4P32259 974 aa3.82□□□□□ -1.8
SWI1YPL016W YGL015CP33199 130 aa3.82□□□□□ -1.8
SWI1YPL016W SEA4P38164 1038 aa3.82□□□□□ -1.8
SWI1YPL016W SAD1P43589 448 aa3.82□□□□□ -1.8
SWI1YPL016W MET13P53128 600 aa3.82□□□□□ -1.8
SWI1YPL016W NRD1P53617 575 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
SWI1YPL016W LGE1Q02796 332 aaKnown RBP3.82□□□□□ -1.8
SWI1YPL016W TMA10Q06177 86 aa3.82□□□□□ -1.8
SWI1YPL016W ATG17Q06410 417 aa3.82□□□□□ -1.8
SWI1YPL016W BRX1Q08235 291 aaKnown RBP3.82□□□□□ -1.8
SWI1YPL016W YLR125WQ12138 136 aa3.82□□□□□ -1.8
SWI1YPL016W ARG80P07249 177 aa3.81□□□□□ -1.8
SWI1YPL016W RAD18P10862 487 aa3.81□□□□□ -1.8
SWI1YPL016W FPS1P23900 669 aa3.81□□□□□ -1.8
SWI1YPL016W SQT1P35184 431 aa3.81□□□□□ -1.8
SWI1YPL016W CAJ1P39101 391 aa3.81□□□□□ -1.8
SWI1YPL016W FET5P43561 622 aa3.81□□□□□ -1.8
SWI1YPL016W IOC3P43596 787 aa3.81□□□□□ -1.8
SWI1YPL016W YFR018CP43599 363 aa3.81□□□□□ -1.8
SWI1YPL016W RSM26P47141 266 aa3.81□□□□□ -1.8
SWI1YPL016W BRO1P48582 844 aa3.81□□□□□ -1.8
SWI1YPL016W NUP42P49686 430 aaKnown RBP3.81□□□□□ -1.8
SWI1YPL016W GOR1P53839 350 aa3.81□□□□□ -1.8
SWI1YPL016W NSG2P53898 299 aa3.81□□□□□ -1.8
SWI1YPL016W PRP42Q03776 544 aaKnown RBP3.81□□□□□ -1.8
SWI1YPL016W SCEIP03882 235 aa3.81□□□□□ -1.8
SWI1YPL016W GAL1P04385 528 aa3.81□□□□□ -1.8
SWI1YPL016W YAP1P19880 650 aaKnown RBP3.81□□□□□ -1.8
SWI1YPL016W PWP1P21304 576 aaKnown RBP3.81□□□□□ -1.8
SWI1YPL016W RNR3P21672 869 aaKnown RBP3.81□□□□□ -1.8
SWI1YPL016W CDC20P26309 610 aa3.81□□□□□ -1.8
SWI1YPL016W SAC1P32368 623 aaKnown RBP3.81□□□□□ -1.8
SWI1YPL016W MDJ1P35191 511 aa3.81□□□□□ -1.8
SWI1YPL016W RRP4P38792 359 aaKnown RBP3.81□□□□□ -1.8
SWI1YPL016W INP51P40559 946 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms