RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C MNN11P46985 422 aaKnown RBP8.26□□□□□ -1.09
LSP1YPL004C YNR061CP53747 219 aa8.26□□□□□ -1.09
LSP1YPL004C INA17Q02888 182 aa8.26□□□□□ -1.09
LSP1YPL004C MTG1Q03151 367 aaPredicted RBP8.26□□□□□ -1.09
LSP1YPL004C RPN4Q03465 531 aa8.26□□□□□ -1.09
LSP1YPL004C UBR1P19812 1950 aa8.26□□□□□ -1.09
LSP1YPL004C PET123P17558 318 aa8.25□□□□□ -1.09
LSP1YPL004C ADY2P25613 283 aa8.25□□□□□ -1.09
LSP1YPL004C HXT3P32466 567 aaKnown RBP8.25□□□□□ -1.09
LSP1YPL004C SLX5P32828 619 aaKnown RBP8.25□□□□□ -1.09
LSP1YPL004C KAP104P38217 918 aaKnown RBP8.25□□□□□ -1.09
LSP1YPL004C YJL132WP47014 750 aa8.25□□□□□ -1.09
LSP1YPL004C TCB2P48231 1178 aa8.25□□□□□ -1.09
LSP1YPL004C TAN1P53072 289 aaPredicted RBP8.25□□□□□ -1.09
LSP1YPL004C YCS4Q06156 1176 aa8.25□□□□□ -1.09
LSP1YPL004C YSH1Q06224 779 aaPredicted RBP8.25□□□□□ -1.09
LSP1YPL004C CLP1Q08685 445 aaPredicted RBP8.25□□□□□ -1.09
LSP1YPL004C YDR018CQ12185 396 aa8.25□□□□□ -1.09
LSP1YPL004C MEX67Q99257 599 aaKnown RBP8.25□□□□□ -1.09
LSP1YPL004C CET1O13297 549 aaPredicted RBP8.24□□□□□ -1.09
LSP1YPL004C ARF2P19146 181 aaKnown RBP8.24□□□□□ -1.09
LSP1YPL004C SLY1P22213 666 aa8.24□□□□□ -1.09
LSP1YPL004C ECM32P32644 1121 aaKnown RBP8.24□□□□□ -1.09
LSP1YPL004C BIT2P38346 545 aa8.24□□□□□ -1.09
LSP1YPL004C MMS21P38632 267 aa8.24□□□□□ -1.09
LSP1YPL004C CRP1P38845 465 aaKnown RBP8.24□□□□□ -1.09
LSP1YPL004C SMF1P38925 575 aa8.24□□□□□ -1.09
LSP1YPL004C STL1P39932 569 aa8.24□□□□□ -1.09
LSP1YPL004C YEL028WP39989 153 aa8.24□□□□□ -1.09
LSP1YPL004C OSW5P40219 148 aa8.24□□□□□ -1.09
LSP1YPL004C UBP7P40453 1071 aa8.24□□□□□ -1.09
LSP1YPL004C EMW1P42842 904 aaKnown RBP8.24□□□□□ -1.09
LSP1YPL004C CNN1P43618 361 aa8.24□□□□□ -1.09
LSP1YPL004C DLD2P46681 530 aaKnown RBP8.24□□□□□ -1.09
LSP1YPL004C YML6P51998 286 aa8.24□□□□□ -1.09
LSP1YPL004C YNR065CP53751 1116 aa8.24□□□□□ -1.09
LSP1YPL004C VPS9P54787 451 aa8.24□□□□□ -1.09
LSP1YPL004C ADI1Q03677 179 aa8.24□□□□□ -1.09
LSP1YPL004C EFG1Q3E705 233 aaKnown RBP8.24□□□□□ -1.09
LSP1YPL004C PAP1P29468 568 aaKnown RBP8.23□□□□□ -1.09
LSP1YPL004C TYE7P33122 291 aaPredicted RBP8.23□□□□□ -1.09
LSP1YPL004C NDC80P40460 691 aa8.23□□□□□ -1.09
LSP1YPL004C MVP1P40959 511 aaKnown RBP8.23□□□□□ -1.09
LSP1YPL004C FLC3P53121 802 aa8.23□□□□□ -1.09
LSP1YPL004C CWC22P53333 577 aaKnown RBP8.23□□□□□ -1.09
LSP1YPL004C YMR187CQ03236 431 aa8.23□□□□□ -1.09
LSP1YPL004C ECI1Q05871 280 aa8.23□□□□□ -1.09
LSP1YPL004C MCM16Q12262 181 aa8.23□□□□□ -1.09
LSP1YPL004C SEY1Q99287 776 aa8.23□□□□□ -1.09
LSP1YPL004C AIM26P32858 118 aa8.22□□□□□ -1.09
LSP1YPL004C STE5P32917 917 aa8.22□□□□□ -1.09
LSP1YPL004C ADD66P36040 267 aa8.22□□□□□ -1.09
LSP1YPL004C DIA4P38705 446 aaPredicted RBP8.22□□□□□ -1.09
LSP1YPL004C FMO1P38866 432 aa8.22□□□□□ -1.09
LSP1YPL004C SAK1P38990 1142 aa8.22□□□□□ -1.09
LSP1YPL004C MND2P40577 368 aa8.22□□□□□ -1.09
LSP1YPL004C RRN7P40992 514 aa8.22□□□□□ -1.09
LSP1YPL004C RPS10BP46784 105 aaKnown RBP8.22□□□□□ -1.09
LSP1YPL004C ALY2P47029 1046 aa8.22□□□□□ -1.09
LSP1YPL004C RPC17P47076 161 aa8.22□□□□□ -1.09
LSP1YPL004C HLJ1P48353 224 aa8.22□□□□□ -1.09
LSP1YPL004C VEL1P53058 206 aa8.22□□□□□ -1.09
LSP1YPL004C RIM8P53179 542 aa8.22□□□□□ -1.09
LSP1YPL004C YGR127WP53275 312 aa8.22□□□□□ -1.09
LSP1YPL004C TDA9Q04545 1251 aa8.22□□□□□ -1.09
LSP1YPL004C SWC7Q06707 132 aa8.22□□□□□ -1.09
LSP1YPL004C RPS10AQ08745 105 aaPredicted RBP8.22□□□□□ -1.09
LSP1YPL004C AIM41Q12032 185 aa8.22□□□□□ -1.09
LSP1YPL004C ZRT2Q12436 422 aa8.22□□□□□ -1.09
LSP1YPL004C AFI1Q99222 893 aa8.22□□□□□ -1.09
LSP1YPL004C ENO1P00924 437 aaKnown RBP8.21□□□□□ -1.1
LSP1YPL004C PYC1P11154 1178 aaKnown RBP8.21□□□□□ -1.1
LSP1YPL004C HOM2P13663 365 aaKnown RBP8.21□□□□□ -1.1
LSP1YPL004C HCM1P25364 564 aa8.21□□□□□ -1.1
LSP1YPL004C PAT1P25644 796 aaKnown RBP8.21□□□□□ -1.1
LSP1YPL004C KAR9P32526 644 aa8.21□□□□□ -1.1
LSP1YPL004C SPT23P35210 1082 aa8.21□□□□□ -1.1
LSP1YPL004C MRPL40P36534 297 aa8.21□□□□□ -1.1
LSP1YPL004C APM3P38153 483 aa8.21□□□□□ -1.1
LSP1YPL004C SRP68P38687 599 aaKnown RBP8.21□□□□□ -1.1
LSP1YPL004C PPE1P38796 400 aa8.21□□□□□ -1.1
LSP1YPL004C SAW1P39735 261 aa8.21□□□□□ -1.1
LSP1YPL004C YMR134WP40207 237 aa8.21□□□□□ -1.1
LSP1YPL004C ATM1P40416 690 aa8.21□□□□□ -1.1
LSP1YPL004C YIR007WP40566 764 aa8.21□□□□□ -1.1
LSP1YPL004C PYK2P52489 506 aaKnown RBP8.21□□□□□ -1.1
LSP1YPL004C NRD1P53617 575 aaKnown RBP RIP-Chip data8.21□□□□□ -1.1not detected
LSP1YPL004C YNR063WP53749 607 aa8.21□□□□□ -1.1
LSP1YPL004C PEX15Q08215 383 aa8.21□□□□□ -1.1
LSP1YPL004C APL5Q08951 932 aaKnown RBP8.21□□□□□ -1.1
LSP1YPL004C YLR046CQ12253 270 aa8.21□□□□□ -1.1
LSP1YPL004C MSF1P08425 469 aa8.2□□□□□ -1.1
LSP1YPL004C HSF1P10961 833 aa8.2□□□□□ -1.1
LSP1YPL004C GCG1P32656 232 aaKnown RBP8.2□□□□□ -1.1
LSP1YPL004C RAD5P32849 1169 aaPredicted RBP8.2□□□□□ -1.1
LSP1YPL004C STE13P33894 931 aa8.2□□□□□ -1.1
LSP1YPL004C HXT5P38695 592 aa8.2□□□□□ -1.1
LSP1YPL004C MKT1P40850 830 aaKnown RBP8.2□□□□□ -1.1
LSP1YPL004C MAD1P40957 749 aa8.2□□□□□ -1.1
LSP1YPL004C AIM23P47015 356 aa8.2□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms