RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF2	YOR290C	CBR1	P38626	284 aa	Known RBP	4.15	□□□□□ -1.75
SNF2	YOR290C	FSH1	P38777	243 aa	Known RBP	4.15	□□□□□ -1.75
SNF2	YOR290C	TRM5	P38793	499 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	ECM10	P39987	644 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	SIP5	P40210	489 aa	Known RBP	4.15	□□□□□ -1.75
SNF2	YOR290C	LSM8	P47093	109 aa	Known RBP	4.15	□□□□□ -1.75
SNF2	YOR290C	ARG5,6	Q01217	863 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	HLR1	Q04429	423 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	ADY4	Q05955	493 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	MNL2	Q12205	849 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	GIS3	Q12418	502 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	ATP2	P00830	511 aa	Known RBP	4.15	□□□□□ -1.75
SNF2	YOR290C	CDC31	P06704	161 aa	Known RBP	4.15	□□□□□ -1.75
SNF2	YOR290C	CHS2	P14180	963 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	SIN4	P32259	974 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	RME1	P32338	300 aa	Known RBP	4.15	□□□□□ -1.75
SNF2	YOR290C	RAD23	P32628	398 aa	Known RBP	4.15	□□□□□ -1.75
SNF2	YOR290C	MIA40	P36046	403 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	HIS2	P38635	335 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	YER034W	P40022	185 aa	Known RBP	4.15	□□□□□ -1.75
SNF2	YOR290C	IML2	P47031	731 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	YGL242C	P53066	181 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	MTD1	Q02046	320 aa	Known RBP	4.15	□□□□□ -1.75
SNF2	YOR290C	HAP5	Q02516	242 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	CRF1	Q04930	467 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	PIG1	Q06216	648 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	SPO75	Q07798	868 aa		4.15	□□□□□ -1.75
SNF2	YOR290C	CHO2	P05374	869 aa	Known RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	MRS4	P23500	304 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	NPP1	P25353	742 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	YBR242W	P38331	238 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	PCM1	P38628	557 aa	Known RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	PIK1	P39104	1066 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	YAR028W	P39548	234 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	SNL1	P40548	159 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	JAC1	P53193	184 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	HAS1	Q03532	505 aa	Known RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	HEL2	Q05580	639 aa	Known RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	DIA2	Q08496	732 aa	Predicted RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	TRM8	Q12009	286 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	MET5	P47169	1442 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	REP2	P03872	296 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	HXK2	P04807	486 aa	Known RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	RAM1	P22007	431 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	RAM2	P29703	316 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	RSM22	P36056	628 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	MET1	P36150	593 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	EGD2	P38879	174 aa	Known RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	CCT6	P39079	546 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	FMC1	P40491	155 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	YJR008W	P47085	338 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	NOP19	P53317	196 aa	Predicted RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	DSE4	P53753	1117 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	COS1	P53822	381 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	YLR345W	Q06137	509 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	YLR346C	Q06139	101 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	GMC2	Q06201	188 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	ATG26	Q06321	1198 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	ENV9	Q08651	330 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	NUS1	Q12063	375 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	ARG4	P04076	463 aa	Predicted RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	RPP1A	P05318	106 aa	Predicted RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	MPH2	P0CD99	609 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	CLB2	P24869	491 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	PAP1	P29468	568 aa	Known RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	ERG9	P29704	444 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	ASF2	P32448	525 aa	Predicted RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	GLC3	P32775	704 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	SOF1	P33750	489 aa	Known RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	RTC3	P38804	111 aa	Predicted RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	PCL6	P40038	420 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	BST1	P43571	1029 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	UBP6	P43593	499 aa	Known RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	SDT1	P53078	280 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	ARX1	Q03862	593 aa	Known RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	YDR179W-A	Q03983	463 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	DYN3	Q04949	312 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	PDX1	P16451	410 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	EXO70	P19658	623 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	MSM1	P22438	575 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	SEC61	P32915	480 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	UIP5	P36137	443 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	BOI1	P38041	980 aa	Known RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	PSY4	P38193	441 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	THI6	P41835	540 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	SSY5	P47002	699 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	COG7	P53195	279 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	NCS2	P53923	493 aa	Predicted RBP	4.14	□□□□□ -1.75
SNF2	YOR290C	ORC3	P54790	616 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	ADA2	Q02336	434 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	SNZ1	Q03148	297 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	YAP6	Q03935	383 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	TOS4	Q06266	489 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	HER1	Q12276	1246 aa		4.14	□□□□□ -1.75
SNF2	YOR290C	CPA2	P03965	1118 aa	Known RBP	4.13	□□□□□ -1.75
SNF2	YOR290C	ARG3	P05150	338 aa		4.13	□□□□□ -1.75
SNF2	YOR290C	IDI1	P15496	288 aa		4.13	□□□□□ -1.75
SNF2	YOR290C	CSM1	P25651	190 aa		4.13	□□□□□ -1.75
SNF2	YOR290C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
SNF2	YOR290C	MNT3	P40549	630 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms