RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	TFC6	Q06339	672 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	ICL2	Q12031	575 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	MED1	Q12321	566 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	SEC12	P11655	471 aa		4.23	□□□□□ -1.73
CAF20	YOR276W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
CAF20	YOR276W	AAC3	P18238	307 aa		4.23	□□□□□ -1.73
CAF20	YOR276W	IMP2'	P32351	346 aa		4.23	□□□□□ -1.73
CAF20	YOR276W	ARP2	P32381	391 aa	Known RBP	4.23	□□□□□ -1.73
CAF20	YOR276W	JNM1	P36224	373 aa		4.23	□□□□□ -1.73
CAF20	YOR276W	YBR053C	P38235	358 aa		4.23	□□□□□ -1.73
CAF20	YOR276W	YER010C	P40011	234 aa		4.23	□□□□□ -1.73
CAF20	YOR276W	BAP3	P41815	604 aa		4.23	□□□□□ -1.73
CAF20	YOR276W	AMA1	P50082	593 aa		4.23	□□□□□ -1.73
CAF20	YOR276W	FDC1	Q03034	503 aa		4.23	□□□□□ -1.73
CAF20	YOR276W	DLT1	Q04216	342 aa		4.23	□□□□□ -1.73
CAF20	YOR276W	TSR2	Q06672	205 aa	Known RBP	4.23	□□□□□ -1.73
CAF20	YOR276W	PCD1	Q12524	340 aa		4.23	□□□□□ -1.73
CAF20	YOR276W	RTP1	Q12751	981 aa		4.23	□□□□□ -1.73
CAF20	YOR276W	TUF1	P02992	437 aa	Known RBP	4.22	□□□□□ -1.73
CAF20	YOR276W	MET3	P08536	511 aa		4.22	□□□□□ -1.73
CAF20	YOR276W	CAF20	P12962	161 aa	Known RBP	4.22	□□□□□ -1.73
CAF20	YOR276W	PAH1	P32567	862 aa		4.22	□□□□□ -1.73
CAF20	YOR276W	MTH1	P35198	433 aa		4.22	□□□□□ -1.73
CAF20	YOR276W	TEF4	P36008	412 aa	Known RBP	4.22	□□□□□ -1.73
CAF20	YOR276W	NPR3	P38742	1146 aa		4.22	□□□□□ -1.73
CAF20	YOR276W	VPS8	P39702	1274 aa		4.22	□□□□□ -1.73
CAF20	YOR276W	PIG2	P40187	538 aa		4.22	□□□□□ -1.73
CAF20	YOR276W	ELO3	P40319	345 aa		4.22	□□□□□ -1.73
CAF20	YOR276W	ATF1	P40353	525 aa		4.22	□□□□□ -1.73
CAF20	YOR276W	IMA1	P53051	589 aa		4.22	□□□□□ -1.73
CAF20	YOR276W	YRB30	P53107	440 aa	Predicted RBP	4.22	□□□□□ -1.73
CAF20	YOR276W	VPS64	Q03944	604 aa		4.22	□□□□□ -1.73
CAF20	YOR276W	SNO4	Q04902	237 aa		4.22	□□□□□ -1.73
CAF20	YOR276W	HSP33	Q08914	237 aa	Known RBP	4.22	□□□□□ -1.73
CAF20	YOR276W	HSP32	Q08992	237 aa		4.22	□□□□□ -1.73
CAF20	YOR276W	CHS5	Q12114	671 aa	Known RBP	4.22	□□□□□ -1.73
CAF20	YOR276W	COX17	Q12287	69 aa		4.22	□□□□□ -1.73
CAF20	YOR276W	CTT1	P06115	562 aa		4.21	□□□□□ -1.74
CAF20	YOR276W	CNS1	P33313	385 aa		4.21	□□□□□ -1.74
CAF20	YOR276W	BCD1	P38772	366 aa		4.21	□□□□□ -1.74
CAF20	YOR276W	FSH1	P38777	243 aa	Known RBP	4.21	□□□□□ -1.74
CAF20	YOR276W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
CAF20	YOR276W	YEL025C	P39991	1188 aa		4.21	□□□□□ -1.74
CAF20	YOR276W	ESL1	P40456	1118 aa		4.21	□□□□□ -1.74
CAF20	YOR276W	UPF3	P48412	387 aa	Known RBP	4.21	□□□□□ -1.74
CAF20	YOR276W	ATG21	Q02887	496 aa		4.21	□□□□□ -1.74
CAF20	YOR276W	HOF1	Q05080	669 aa		4.21	□□□□□ -1.74
CAF20	YOR276W	ADY4	Q05955	493 aa		4.21	□□□□□ -1.74
CAF20	YOR276W	IRC13	Q08630	104 aa		4.21	□□□□□ -1.74
CAF20	YOR276W	FRE5	Q08908	694 aa		4.21	□□□□□ -1.74
CAF20	YOR276W	ZRT2	Q12436	422 aa		4.21	□□□□□ -1.74
CAF20	YOR276W	TPK1	P06244	397 aa		4.2	□□□□□ -1.74
CAF20	YOR276W	CDC31	P06704	161 aa	Known RBP	4.2	□□□□□ -1.74
CAF20	YOR276W	VPS33	P20795	691 aa		4.2	□□□□□ -1.74
CAF20	YOR276W	PRE2	P30656	287 aa	Known RBP	4.2	□□□□□ -1.74
CAF20	YOR276W	HIS7	P33734	552 aa	Known RBP	4.2	□□□□□ -1.74
CAF20	YOR276W	YJL193W	P39542	402 aa		4.2	□□□□□ -1.74
CAF20	YOR276W	LRO1	P40345	661 aa		4.2	□□□□□ -1.74
CAF20	YOR276W	BST1	P43571	1029 aa		4.2	□□□□□ -1.74
CAF20	YOR276W	MPS3	P47069	682 aa		4.2	□□□□□ -1.74
CAF20	YOR276W	PSP1	P50896	841 aa	Known RBP	4.2	□□□□□ -1.74
CAF20	YOR276W	PAN2	P53010	1115 aa	Predicted RBP	4.2	□□□□□ -1.74
CAF20	YOR276W	YGR054W	P53235	642 aa	Known RBP	4.2	□□□□□ -1.74
CAF20	YOR276W	GND2	P53319	492 aa		4.2	□□□□□ -1.74
CAF20	YOR276W	ARR3	Q06598	404 aa		4.2	□□□□□ -1.74
CAF20	YOR276W	FUM1	P08417	488 aa	Known RBP	4.19	□□□□□ -1.74
CAF20	YOR276W	PRP28	P23394	588 aa		4.19	□□□□□ -1.74
CAF20	YOR276W	PPS1	P38148	807 aa		4.19	□□□□□ -1.74
CAF20	YOR276W	NOP16	P40007	231 aa	Known RBP	4.19	□□□□□ -1.74
CAF20	YOR276W	SDS3	P40505	327 aa		4.19	□□□□□ -1.74
CAF20	YOR276W	LYS14	P40971	790 aa		4.19	□□□□□ -1.74
CAF20	YOR276W	ZAP1	P47043	880 aa		4.19	□□□□□ -1.74
CAF20	YOR276W	UBC11	P52492	156 aa		4.19	□□□□□ -1.74
CAF20	YOR276W	COG1	P53079	417 aa		4.19	□□□□□ -1.74
CAF20	YOR276W	AIM6	Q07716	390 aa		4.19	□□□□□ -1.74
CAF20	YOR276W	SDH5	Q08230	162 aa		4.19	□□□□□ -1.74
CAF20	YOR276W	SUL2	Q12325	893 aa		4.19	□□□□□ -1.74
CAF20	YOR276W	FOB1	O13329	566 aa		4.18	□□□□□ -1.74
CAF20	YOR276W	CDC16	P09798	840 aa		4.18	□□□□□ -1.74
CAF20	YOR276W	CBF2	P32504	956 aa		4.18	□□□□□ -1.74
CAF20	YOR276W	MSS1	P32559	526 aa	Predicted RBP	4.18	□□□□□ -1.74
CAF20	YOR276W	DSS4	P32601	143 aa		4.18	□□□□□ -1.74
CAF20	YOR276W	PHO11	P35842	467 aa		4.18	□□□□□ -1.74
CAF20	YOR276W	PHO12	P38693	467 aa		4.18	□□□□□ -1.74
CAF20	YOR276W	YHL017W	P38745	532 aa		4.18	□□□□□ -1.74
CAF20	YOR276W	REV7	P38927	245 aa		4.18	□□□□□ -1.74
CAF20	YOR276W	IDS2	P46958	469 aa		4.18	□□□□□ -1.74
CAF20	YOR276W	SRB7	P47822	140 aa		4.18	□□□□□ -1.74
CAF20	YOR276W	TEL2	P53038	688 aa		4.18	□□□□□ -1.74
CAF20	YOR276W	COS12	P53053	380 aa		4.18	□□□□□ -1.74
CAF20	YOR276W	TAM41	P53230	385 aa		4.18	□□□□□ -1.74
CAF20	YOR276W	HBT1	Q07653	1046 aa	Known RBP	4.18	□□□□□ -1.74
CAF20	YOR276W	YKL033W-A	Q86ZR7	236 aa		4.18	□□□□□ -1.74
CAF20	YOR276W	PET122	P10355	254 aa		4.17	□□□□□ -1.74
CAF20	YOR276W	BIK1	P11709	440 aa		4.17	□□□□□ -1.74
CAF20	YOR276W	NTH1	P32356	751 aa		4.17	□□□□□ -1.74
CAF20	YOR276W	ELF1	P36053	145 aa		4.17	□□□□□ -1.74
CAF20	YOR276W	CUE2	P36075	443 aa	Known RBP	4.17	□□□□□ -1.74
CAF20	YOR276W	UBS1	P38290	277 aa		4.17	□□□□□ -1.74
CAF20	YOR276W	ARB1	P40024	610 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms