RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W PHM6Q05637 104 aa5.45□□□□□ -1.54
VAM3YOR106W URA3P03962 267 aa5.44□□□□□ -1.54
VAM3YOR106W EXO1P39875 702 aa5.44□□□□□ -1.54
VAM3YOR106W CRT10Q08226 957 aa5.44□□□□□ -1.54
VAM3YOR106W RTK1Q12100 620 aaPredicted RBP5.44□□□□□ -1.54
VAM3YOR106W ICT1Q12385 394 aa5.44□□□□□ -1.54
VAM3YOR106W CBP3P21560 335 aa5.43□□□□□ -1.54
VAM3YOR106W SEC5P89102 971 aa5.43□□□□□ -1.54
VAM3YOR106W SLX4Q12098 748 aa5.43□□□□□ -1.54
VAM3YOR106W PSF3Q12146 194 aa5.43□□□□□ -1.54
VAM3YOR106W AHA1Q12449 350 aaKnown RBP5.43□□□□□ -1.54
VAM3YOR106W MRC1P25588 1096 aa5.42□□□□□ -1.54
VAM3YOR106W ENP1P38333 483 aaKnown RBP5.42□□□□□ -1.54
VAM3YOR106W SDH8P38345 138 aa5.42□□□□□ -1.54
VAM3YOR106W ULP2P40537 1034 aaPredicted RBP5.42□□□□□ -1.54
VAM3YOR106W MAD2P40958 196 aa5.42□□□□□ -1.54
VAM3YOR106W YNR071CP53757 342 aa5.42□□□□□ -1.54
VAM3YOR106W YAP7Q08182 245 aa5.42□□□□□ -1.54
VAM3YOR106W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
VAM3YOR106W PCL8Q08966 492 aa5.42□□□□□ -1.54
VAM3YOR106W PLC1P32383 869 aa5.41□□□□□ -1.54
VAM3YOR106W CDC5P32562 705 aa5.41□□□□□ -1.54
VAM3YOR106W TMT1P32643 299 aa5.41□□□□□ -1.54
VAM3YOR106W BEM3P32873 1128 aa5.41□□□□□ -1.54
VAM3YOR106W YIL092WP40497 633 aa5.41□□□□□ -1.54
VAM3YOR106W TDA10P42938 290 aa5.41□□□□□ -1.54
VAM3YOR106W SSB1P11484 613 aaKnown RBP5.4□□□□□ -1.54
VAM3YOR106W GSY2P27472 705 aa5.4□□□□□ -1.54
VAM3YOR106W STB5P38699 743 aa5.4□□□□□ -1.54
VAM3YOR106W SSB2P40150 613 aaKnown RBP5.4□□□□□ -1.54
VAM3YOR106W PSA1P41940 361 aaKnown RBP5.4□□□□□ -1.54
VAM3YOR106W GSM1P42950 618 aa5.4□□□□□ -1.54
VAM3YOR106W COS12P53053 380 aa5.4□□□□□ -1.54
VAM3YOR106W DIN7Q12086 430 aa5.4□□□□□ -1.54
VAM3YOR106W RDL1Q12305 139 aaKnown RBP5.4□□□□□ -1.54
VAM3YOR106W BI2P03873 423 aa5.39□□□□□ -1.55
VAM3YOR106W PHO3P24031 467 aa5.39□□□□□ -1.55
VAM3YOR106W BPL1P48445 690 aaPredicted RBP5.39□□□□□ -1.55
VAM3YOR106W FOL1P53848 824 aa5.39□□□□□ -1.55
VAM3YOR106W STP1Q00947 519 aa5.39□□□□□ -1.55
VAM3YOR106W BSP1Q06604 576 aa5.39□□□□□ -1.55
VAM3YOR106W TAF5P38129 798 aa5.38□□□□□ -1.55
VAM3YOR106W MTG2P38860 518 aa5.38□□□□□ -1.55
VAM3YOR106W LNP1P38878 278 aa5.38□□□□□ -1.55
VAM3YOR106W RRP8P38961 392 aaKnown RBP5.38□□□□□ -1.55
VAM3YOR106W SAW1P39735 261 aa5.38□□□□□ -1.55
VAM3YOR106W SNO3P43544 222 aa5.38□□□□□ -1.55
VAM3YOR106W IDS2P46958 469 aa5.38□□□□□ -1.55
VAM3YOR106W ERG13P54839 491 aaKnown RBP5.38□□□□□ -1.55
VAM3YOR106W NUR1Q12066 484 aa5.38□□□□□ -1.55
VAM3YOR106W FRE7Q12333 620 aa5.38□□□□□ -1.55
VAM3YOR106W DBP10Q12389 995 aaKnown RBP5.38□□□□□ -1.55
VAM3YOR106W URE2P23202 354 aaKnown RBP5.37□□□□□ -1.55
VAM3YOR106W SDS22P36047 338 aa5.37□□□□□ -1.55
VAM3YOR106W GAT1P43574 510 aa5.37□□□□□ -1.55
VAM3YOR106W NMD5P46970 1048 aa5.37□□□□□ -1.55
VAM3YOR106W TRI1Q05024 226 aa5.37□□□□□ -1.55
VAM3YOR106W GDA1P32621 518 aa5.36□□□□□ -1.55
VAM3YOR106W TGL1P34163 548 aa5.36□□□□□ -1.55
VAM3YOR106W SCS2P40075 244 aaKnown RBP5.36□□□□□ -1.55
VAM3YOR106W VFA1P40080 203 aa5.36□□□□□ -1.55
VAM3YOR106W LAS21P40367 830 aa5.36□□□□□ -1.55
VAM3YOR106W COG2P53271 262 aa5.36□□□□□ -1.55
VAM3YOR106W SPN1Q06505 410 aaPredicted RBP5.36□□□□□ -1.55
VAM3YOR106W CTT1P06115 562 aa5.35□□□□□ -1.55
VAM3YOR106W VAS1P07806 1104 aaKnown RBP5.35□□□□□ -1.55
VAM3YOR106W YJU2P28320 278 aaPredicted RBP5.35□□□□□ -1.55
VAM3YOR106W MAM1P40065 302 aa5.35□□□□□ -1.55
VAM3YOR106W BST1P43571 1029 aa5.35□□□□□ -1.55
VAM3YOR106W SAE2P46946 345 aa5.35□□□□□ -1.55
VAM3YOR106W YNL092WP53934 400 aa5.35□□□□□ -1.55
VAM3YOR106W YPL071CQ02864 156 aa5.35□□□□□ -1.55
VAM3YOR106W CYK3Q07533 885 aa5.35□□□□□ -1.55
VAM3YOR106W RGT2Q12300 763 aa5.35□□□□□ -1.55
VAM3YOR106W YNL058CP53947 316 aa5.34□□□□□ -1.55
VAM3YOR106W AAT1Q01802 451 aa5.34□□□□□ -1.55
VAM3YOR106W RAD33Q04231 177 aa5.34□□□□□ -1.55
VAM3YOR106W TPO3Q06451 622 aa5.34□□□□□ -1.55
VAM3YOR106W PRS5Q12265 496 aaKnown RBP5.34□□□□□ -1.55
VAM3YOR106W PRP45P28004 379 aaPredicted RBP5.33□□□□□ -1.56
VAM3YOR106W CNM67P53865 581 aaKnown RBP5.33□□□□□ -1.56
VAM3YOR106W UBP16Q02863 499 aa5.33□□□□□ -1.56
VAM3YOR106W RSC9Q03124 581 aa5.33□□□□□ -1.56
VAM3YOR106W TRS31Q03337 283 aa5.33□□□□□ -1.56
VAM3YOR106W ENT2Q05785 613 aa5.33□□□□□ -1.56
VAM3YOR106W HRD3Q05787 833 aa5.33□□□□□ -1.56
VAM3YOR106W YLR111WQ12528 110 aa5.33□□□□□ -1.56
VAM3YOR106W YER175W-AQ8TGU4 54 aa5.33□□□□□ -1.56
VAM3YOR106W CHO2P05374 869 aaKnown RBP5.32□□□□□ -1.56
VAM3YOR106W CIR1P42940 261 aa5.32□□□□□ -1.56
VAM3YOR106W IDP3P53982 420 aaKnown RBP5.32□□□□□ -1.56
VAM3YOR106W YML119WQ03208 357 aa5.32□□□□□ -1.56
VAM3YOR106W AMD2P22580 549 aa5.31□□□□□ -1.56
VAM3YOR106W RPS7AP26786 190 aaKnown RBP5.31□□□□□ -1.56
VAM3YOR106W PRE2P30656 287 aaKnown RBP5.31□□□□□ -1.56
VAM3YOR106W YLF2P38746 405 aa5.31□□□□□ -1.56
VAM3YOR106W RAD26P40352 1085 aa5.31□□□□□ -1.56
VAM3YOR106W ASK10P48361 1146 aa5.31□□□□□ -1.56
VAM3YOR106W PNO1Q99216 274 aaKnown RBP5.31□□□□□ -1.56
VAM3YOR106W ADH4P10127 382 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms