RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	SAT4	P25333	603 aa	Known RBP	3.1	□□□□□ -1.91
SKP2	YNL311C	FBP26	P32604	452 aa		3.1	□□□□□ -1.91
SKP2	YNL311C	YAL037W	P39728	267 aa		3.1	□□□□□ -1.91
SKP2	YNL311C	DAK2	P43550	591 aa		3.1	□□□□□ -1.91
SKP2	YNL311C	BST1	P43571	1029 aa		3.1	□□□□□ -1.91
SKP2	YNL311C	MTO1	P53070	669 aa		3.1	□□□□□ -1.91
SKP2	YNL311C	GUP1	P53154	560 aa		3.1	□□□□□ -1.91
SKP2	YNL311C	RPL34A	P87262	121 aa	Predicted RBP	3.1	□□□□□ -1.91
SKP2	YNL311C	NUP116	Q02630	1113 aa		3.1	□□□□□ -1.91
SKP2	YNL311C	YPL062W	Q02781	134 aa		3.1	□□□□□ -1.91
SKP2	YNL311C	AIM32	Q04689	311 aa		3.1	□□□□□ -1.91
SKP2	YNL311C	RRN11	Q04712	507 aa		3.1	□□□□□ -1.91
SKP2	YNL311C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
SKP2	YNL311C	YPL277C	Q08989	487 aa		3.1	□□□□□ -1.91
SKP2	YNL311C	GNT1	Q12096	491 aa		3.1	□□□□□ -1.91
SKP2	YNL311C	HUA2	Q12134	243 aa		3.1	□□□□□ -1.91
SKP2	YNL311C	COX11	P19516	300 aa	Known RBP	3.09	□□□□□ -1.91
SKP2	YNL311C	LRE1	P25579	583 aa	Known RBP	3.09	□□□□□ -1.91
SKP2	YNL311C	EFB1	P32471	206 aa	Known RBP	3.09	□□□□□ -1.91
SKP2	YNL311C	SEC6	P32844	805 aa		3.09	□□□□□ -1.91
SKP2	YNL311C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
SKP2	YNL311C	NOP4	P37838	685 aa	Known RBP	3.09	□□□□□ -1.91
SKP2	YNL311C	TAE1	P38340	232 aa		3.09	□□□□□ -1.91
SKP2	YNL311C	SMF1	P38925	575 aa		3.09	□□□□□ -1.91
SKP2	YNL311C	CCT6	P39079	546 aa		3.09	□□□□□ -1.91
SKP2	YNL311C	VAC8	P39968	578 aa		3.09	□□□□□ -1.91
SKP2	YNL311C	BUD6	P41697	788 aa		3.09	□□□□□ -1.91
SKP2	YNL311C	MOT3	P54785	490 aa	Known RBP	3.09	□□□□□ -1.91
SKP2	YNL311C	STP3	Q05937	343 aa		3.09	□□□□□ -1.91
SKP2	YNL311C	RCL1	Q08096	367 aa	Predicted RBP	3.09	□□□□□ -1.91
SKP2	YNL311C	YOR296W	Q08748	1289 aa		3.09	□□□□□ -1.91
SKP2	YNL311C	PTC5	Q12511	572 aa		3.09	□□□□□ -1.91
SKP2	YNL311C	YKR104W	P0CE69	306 aa		3.09	□□□□□ -1.92
SKP2	YNL311C	RNR1	P21524	888 aa	Known RBP	3.09	□□□□□ -1.92
SKP2	YNL311C	CFD1	P40558	293 aa		3.09	□□□□□ -1.92
SKP2	YNL311C	HSV2	P50079	448 aa	Predicted RBP	3.09	□□□□□ -1.92
SKP2	YNL311C	COG7	P53195	279 aa		3.09	□□□□□ -1.92
SKP2	YNL311C	ATF2	P53296	535 aa		3.09	□□□□□ -1.92
SKP2	YNL311C	FAR11	P53917	953 aa		3.09	□□□□□ -1.92
SKP2	YNL311C	TGL2	P54857	326 aa		3.09	□□□□□ -1.92
SKP2	YNL311C	NKP2	Q06162	153 aa		3.09	□□□□□ -1.92
SKP2	YNL311C	AAD4	Q07747	329 aa		3.09	□□□□□ -1.92
SKP2	YNL311C	WTM2	Q12206	467 aa		3.09	□□□□□ -1.92
SKP2	YNL311C	NBL1	Q3E7Y6	73 aa		3.09	□□□□□ -1.92
SKP2	YNL311C	ENO1	P00924	437 aa	Known RBP	3.08	□□□□□ -1.92
SKP2	YNL311C	TUF1	P02992	437 aa	Known RBP	3.08	□□□□□ -1.92
SKP2	YNL311C	MATALPHA2	P0CY08	210 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	HMLALPHA2	P0CY09	210 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	CYC8	P14922	966 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	PPH21	P23594	369 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	VBA3	P25594	458 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	SPT5	P27692	1063 aa	Known RBP	3.08	□□□□□ -1.92
SKP2	YNL311C	CAP1	P28495	268 aa	Known RBP	3.08	□□□□□ -1.92
SKP2	YNL311C	ABD1	P32783	436 aa	Predicted RBP	3.08	□□□□□ -1.92
SKP2	YNL311C	VBA5	P36172	582 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	THI6	P41835	540 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	ORC3	P54790	616 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	RPA49	Q01080	415 aa	Predicted RBP	3.08	□□□□□ -1.92
SKP2	YNL311C	SYH1	Q02875	849 aa	Known RBP	3.08	□□□□□ -1.92
SKP2	YNL311C	RPC11	Q04307	110 aa	Predicted RBP	3.08	□□□□□ -1.92
SKP2	YNL311C	GAD1	Q04792	585 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	YLR030W	Q07967	263 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	MET32	Q12041	191 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	SFI1	Q12369	946 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	FOB1	O13329	566 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	PDC5	P16467	563 aa	Known RBP	3.08	□□□□□ -1.92
SKP2	YNL311C	SCL1	P21243	252 aa	Known RBP	3.08	□□□□□ -1.92
SKP2	YNL311C	GEX1	P25596	615 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	MET22	P32179	357 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	SWI3	P32591	825 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	GEX2	P36173	615 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	YMC2	P38087	329 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	CTP1	P38152	299 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	QNS1	P38795	714 aa	Known RBP	3.08	□□□□□ -1.92
SKP2	YNL311C	YKE2	P52553	114 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	RSF1	Q05043	376 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	YLR046C	Q12253	270 aa		3.08	□□□□□ -1.92
SKP2	YNL311C	AI3	P03877	415 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	HOG1	P32485	435 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	LST4	P34239	828 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	SOL2	P37262	315 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	YFL034W	P43564	1073 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	HFM1	P51979	1187 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	YTP1	P53584	459 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	VAC7	P53950	1165 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	RIP-Chip
SKP2	YNL311C	YDR131C	Q03899	556 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	YDR262W	Q12331	272 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	MTF2	P10849	440 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	KIP2	P28743	706 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	PET112	P33893	541 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	RPS10B	P46784	105 aa	Known RBP	3.07	□□□□□ -1.92
SKP2	YNL311C	RPA14	P50106	137 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	AIM14	P53109	570 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	PIR1	Q03178	341 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	YDR444W	Q04093	687 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	SPG3	Q04398	127 aa	Predicted RBP	3.07	□□□□□ -1.92
SKP2	YNL311C	YDL218W	Q07629	317 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	ATG10	Q07879	167 aa		3.07	□□□□□ -1.92
SKP2	YNL311C	RLP24	Q07915	199 aa	Known RBP	3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms