RNA–Protein interactions for RNA: YLR447C

VMA6, Transcript of Subunit d of the V0 integral membrane domain of V-ATPase, yeast

Gene VMA6, Length 1,038 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA6	YLR447C	DSS4	P32601	143 aa		4.3	□□□□□ -1.72
VMA6	YLR447C	RMA1	P36001	430 aa	Known RBP	4.3	□□□□□ -1.72
VMA6	YLR447C	CFD1	P40558	293 aa		4.3	□□□□□ -1.72
VMA6	YLR447C	RNR4	P49723	345 aa	Known RBP	4.3	□□□□□ -1.72
VMA6	YLR447C	HRD3	Q05787	833 aa		4.3	□□□□□ -1.72
VMA6	YLR447C	PCL8	Q08966	492 aa		4.3	□□□□□ -1.72
VMA6	YLR447C	NUP145	P49687	1317 aa		4.29	□□□□□ -1.72
VMA6	YLR447C	MDR1	P53258	950 aa		4.29	□□□□□ -1.72
VMA6	YLR447C	NUP53	Q03790	475 aa		4.29	□□□□□ -1.72
VMA6	YLR447C	PEA2	P40091	420 aa		4.28	□□□□□ -1.72
VMA6	YLR447C	PEF1	P53238	335 aa		4.28	□□□□□ -1.72
VMA6	YLR447C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
VMA6	YLR447C	YJU2	P28320	278 aa	Predicted RBP	4.27	□□□□□ -1.73
VMA6	YLR447C	RRP8	P38961	392 aa	Known RBP	4.27	□□□□□ -1.73
VMA6	YLR447C	COP1	P53622	1201 aa	Known RBP	4.27	□□□□□ -1.73
VMA6	YLR447C	MTD1	Q02046	320 aa	Known RBP	4.27	□□□□□ -1.73
VMA6	YLR447C	CYK3	Q07533	885 aa		4.27	□□□□□ -1.73
VMA6	YLR447C	NGL1	Q08213	363 aa	Known RBP	4.27	□□□□□ -1.73
VMA6	YLR447C	FAP7	Q12055	197 aa	Predicted RBP	4.27	□□□□□ -1.73
VMA6	YLR447C	SRP68	P38687	599 aa	Known RBP	4.26	□□□□□ -1.73
VMA6	YLR447C	LAS21	P40367	830 aa		4.26	□□□□□ -1.73
VMA6	YLR447C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
VMA6	YLR447C	PNO1	Q99216	274 aa	Known RBP	4.26	□□□□□ -1.73
VMA6	YLR447C	CBP3	P21560	335 aa		4.25	□□□□□ -1.73
VMA6	YLR447C	COQ3	P27680	312 aa		4.25	□□□□□ -1.73
VMA6	YLR447C	HXT4	P32467	576 aa		4.25	□□□□□ -1.73
VMA6	YLR447C	CDC5	P32562	705 aa		4.25	□□□□□ -1.73
VMA6	YLR447C	GCS1	P35197	352 aa		4.25	□□□□□ -1.73
VMA6	YLR447C	MTG2	P38860	518 aa		4.25	□□□□□ -1.73
VMA6	YLR447C	CIR1	P42940	261 aa		4.25	□□□□□ -1.73
VMA6	YLR447C	IOC4	Q04213	475 aa		4.25	□□□□□ -1.73
VMA6	YLR447C	CWH43	P25618	953 aa		4.24	□□□□□ -1.73
VMA6	YLR447C	NMD2	P38798	1089 aa	Known RBP	4.24	□□□□□ -1.73
VMA6	YLR447C	FLO5	P38894	1075 aa		4.24	□□□□□ -1.73
VMA6	YLR447C	GPP1	P41277	250 aa	Known RBP	4.24	□□□□□ -1.73
VMA6	YLR447C	COG2	P53271	262 aa		4.24	□□□□□ -1.73
VMA6	YLR447C	RAD33	Q04231	177 aa		4.24	□□□□□ -1.73
VMA6	YLR447C	BUD7	Q08754	746 aa		4.24	□□□□□ -1.73
VMA6	YLR447C	CET1	O13297	549 aa	Predicted RBP	4.23	□□□□□ -1.73
VMA6	YLR447C	ILS1	P09436	1072 aa	Known RBP	4.23	□□□□□ -1.73
VMA6	YLR447C	YEL076C-A	P0CX16	216 aa		4.23	□□□□□ -1.73
VMA6	YLR447C	YLR464W	P0CX17	216 aa		4.23	□□□□□ -1.73
VMA6	YLR447C	YER190C-B	P0CX94	160 aa		4.23	□□□□□ -1.73
VMA6	YLR447C	YEL077W-A	P0CX95	160 aa		4.23	□□□□□ -1.73
VMA6	YLR447C	YGR296C-B	P0CX96	160 aa		4.23	□□□□□ -1.73
VMA6	YLR447C	YPL283W-B	P0CX97	160 aa		4.23	□□□□□ -1.73
VMA6	YLR447C	YPR204C-A	P0CX98	160 aa		4.23	□□□□□ -1.73
VMA6	YLR447C	SDH8	P38345	138 aa		4.23	□□□□□ -1.73
VMA6	YLR447C	YEL076C	P39971	216 aa		4.23	□□□□□ -1.73
VMA6	YLR447C	YNR029C	P53729	429 aa	Known RBP	4.23	□□□□□ -1.73
VMA6	YLR447C	AAT1	Q01802	451 aa		4.23	□□□□□ -1.73
VMA6	YLR447C	SNU56	Q03782	492 aa	Known RBP	4.23	□□□□□ -1.73
VMA6	YLR447C	VPS5	Q92331	675 aa		4.23	□□□□□ -1.73
VMA6	YLR447C	GDA1	P32621	518 aa		4.22	□□□□□ -1.73
VMA6	YLR447C	FTH1	P38310	465 aa		4.22	□□□□□ -1.73
VMA6	YLR447C	CCT4	P39078	528 aa	Known RBP	4.22	□□□□□ -1.73
VMA6	YLR447C	YGR237C	P50089	785 aa		4.22	□□□□□ -1.73
VMA6	YLR447C	SNA4	Q07549	140 aa		4.22	□□□□□ -1.73
VMA6	YLR447C	YOR389W	Q08912	624 aa		4.22	□□□□□ -1.73
VMA6	YLR447C	YPR027C	Q12079	277 aa		4.22	□□□□□ -1.73
VMA6	YLR447C	ATO2	P32907	282 aa		4.21	□□□□□ -1.74
VMA6	YLR447C	YAT2	P40017	923 aa		4.21	□□□□□ -1.74
VMA6	YLR447C	MAM1	P40065	302 aa		4.21	□□□□□ -1.74
VMA6	YLR447C	YIR016W	P40572	265 aa		4.21	□□□□□ -1.74
VMA6	YLR447C	MDV1	P47025	714 aa		4.21	□□□□□ -1.74
VMA6	YLR447C	BOP3	P53958	396 aa		4.21	□□□□□ -1.74
VMA6	YLR447C	SRL1	Q08673	210 aa		4.21	□□□□□ -1.74
VMA6	YLR447C	RMP1	Q12530	201 aa		4.21	□□□□□ -1.74
VMA6	YLR447C	YGR161W-C	Q3E744	92 aa		4.21	□□□□□ -1.74
VMA6	YLR447C	ATP12	P22135	325 aa		4.2	□□□□□ -1.74
VMA6	YLR447C	RPT3	P33298	428 aa	Known RBP	4.2	□□□□□ -1.74
VMA6	YLR447C	SCO2	P38072	301 aa		4.2	□□□□□ -1.74
VMA6	YLR447C	LNP1	P38878	278 aa		4.2	□□□□□ -1.74
VMA6	YLR447C	GPG1	P53130	126 aa		4.2	□□□□□ -1.74
VMA6	YLR447C	SKY1	Q03656	742 aa		4.2	□□□□□ -1.74
VMA6	YLR447C	ATX2	Q12067	313 aa		4.2	□□□□□ -1.74
VMA6	YLR447C	HOS1	Q12214	470 aa		4.2	□□□□□ -1.74
VMA6	YLR447C	IMD2	P38697	523 aa	Known RBP	4.19	□□□□□ -1.74
VMA6	YLR447C	RAD26	P40352	1085 aa		4.19	□□□□□ -1.74
VMA6	YLR447C	IRC5	P43610	853 aa		4.19	□□□□□ -1.74
VMA6	YLR447C	IMD3	P50095	523 aa	Known RBP	4.19	□□□□□ -1.74
VMA6	YLR447C	YNL092W	P53934	400 aa		4.19	□□□□□ -1.74
VMA6	YLR447C	RPL15B	P54780	204 aa	Predicted RBP	4.19	□□□□□ -1.74
VMA6	YLR447C	CHO2	P05374	869 aa	Known RBP	4.18	□□□□□ -1.74
VMA6	YLR447C	AIM17	P23180	465 aa	Known RBP	4.18	□□□□□ -1.74
VMA6	YLR447C	YCP4	P25349	247 aa	Known RBP	4.18	□□□□□ -1.74
VMA6	YLR447C	PLC1	P32383	869 aa		4.18	□□□□□ -1.74
VMA6	YLR447C	CIN1	P40987	1014 aa		4.18	□□□□□ -1.74
VMA6	YLR447C	MAF1	P41910	395 aa		4.18	□□□□□ -1.74
VMA6	YLR447C	LYS20	P48570	428 aa	Known RBP	4.18	□□□□□ -1.74
VMA6	YLR447C	UBP16	Q02863	499 aa		4.18	□□□□□ -1.74
VMA6	YLR447C	YOR378W	Q08902	515 aa		4.18	□□□□□ -1.74
VMA6	YLR447C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
VMA6	YLR447C	UBX3	Q12229	455 aa		4.18	□□□□□ -1.74
VMA6	YLR447C	YOR111W	Q99210	232 aa		4.18	□□□□□ -1.74
VMA6	YLR447C	MAK32	P23060	363 aa		4.17	□□□□□ -1.74
VMA6	YLR447C	SER1	P33330	395 aa	Known RBP	4.17	□□□□□ -1.74
VMA6	YLR447C	NOP2	P40991	618 aa	Known RBP	4.17	□□□□□ -1.74
VMA6	YLR447C	DUG1	P43616	481 aa	Known RBP	4.17	□□□□□ -1.74
VMA6	YLR447C	YJR142W	P47173	342 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms