RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
SGD1YLR336C ADE3P07245 946 aaKnown RBP2.47□□□□□ -2.01
SGD1YLR336C TRX2P22803 104 aaKnown RBP2.47□□□□□ -2.01
SGD1YLR336C TDP1P38319 544 aa2.47□□□□□ -2.01
SGD1YLR336C ARB1P40024 610 aaKnown RBP2.47□□□□□ -2.01
SGD1YLR336C PUG1P40100 303 aa2.47□□□□□ -2.01
SGD1YLR336C CPR6P53691 371 aaKnown RBP2.47□□□□□ -2.01
SGD1YLR336C DAK1P54838 584 aaKnown RBP2.47□□□□□ -2.01
SGD1YLR336C NCP1P16603 691 aaKnown RBP2.46□□□□□ -2.02
SGD1YLR336C PHO81P17442 1178 aa2.46□□□□□ -2.02
SGD1YLR336C MSM1P22438 575 aa2.46□□□□□ -2.02
SGD1YLR336C YBR138CP38277 524 aa2.46□□□□□ -2.02
SGD1YLR336C THI6P41835 540 aa2.46□□□□□ -2.02
SGD1YLR336C PAP2P53632 584 aaKnown RBP2.46□□□□□ -2.02
SGD1YLR336C NGL2Q03264 515 aaKnown RBP2.46□□□□□ -2.02
SGD1YLR336C IWR1Q07532 353 aaPredicted RBP2.46□□□□□ -2.02
SGD1YLR336C YPL216WQ08964 1102 aa2.46□□□□□ -2.02
SGD1YLR336C MDM20Q12387 796 aaKnown RBP2.46□□□□□ -2.02
SGD1YLR336C STE12P13574 688 aa2.46□□□□□ -2.02
SGD1YLR336C BET2P20133 325 aa2.46□□□□□ -2.02
SGD1YLR336C RIT1P23796 513 aa2.46□□□□□ -2.02
SGD1YLR336C CCL1P37366 393 aa2.46□□□□□ -2.02
SGD1YLR336C VPS27P40343 622 aaKnown RBP2.46□□□□□ -2.02
SGD1YLR336C ASN1P49089 572 aaKnown RBP2.46□□□□□ -2.02
SGD1YLR336C SAP4P53036 818 aa2.46□□□□□ -2.02
SGD1YLR336C ARC35P53731 342 aaKnown RBP2.46□□□□□ -2.02
SGD1YLR336C AIM6Q07716 390 aa2.46□□□□□ -2.02
SGD1YLR336C YPK1P12688 680 aaKnown RBP2.45□□□□□ -2.02
SGD1YLR336C CDC43P18898 376 aa2.45□□□□□ -2.02
SGD1YLR336C VPS34P22543 875 aa2.45□□□□□ -2.02
SGD1YLR336C EXO84P38261 753 aa2.45□□□□□ -2.02
SGD1YLR336C SDH8P38345 138 aa2.45□□□□□ -2.02
SGD1YLR336C YGL117WP53133 265 aa2.45□□□□□ -2.02
SGD1YLR336C VPS64Q03944 604 aa2.45□□□□□ -2.02
SGD1YLR336C DMC1P25453 334 aa2.45□□□□□ -2.02
SGD1YLR336C CDC5P32562 705 aa2.45□□□□□ -2.02
SGD1YLR336C QRI1P43123 477 aaKnown RBP2.45□□□□□ -2.02
SGD1YLR336C IDS2P46958 469 aa2.45□□□□□ -2.02
SGD1YLR336C YNL092WP53934 400 aa2.45□□□□□ -2.02
SGD1YLR336C LEU2P04173 364 aaPredicted RBP2.44□□□□□ -2.02
SGD1YLR336C CTT1P06115 562 aa2.44□□□□□ -2.02
SGD1YLR336C RNR3P21672 869 aaKnown RBP2.44□□□□□ -2.02
SGD1YLR336C YCR061WP25639 631 aa2.44□□□□□ -2.02
SGD1YLR336C MUP3P38734 546 aa2.44□□□□□ -2.02
SGD1YLR336C ARO9P38840 513 aaPredicted RBP2.44□□□□□ -2.02
SGD1YLR336C ESF2P53743 316 aaKnown RBP2.44□□□□□ -2.02
SGD1YLR336C YML119WQ03208 357 aa2.44□□□□□ -2.02
SGD1YLR336C GIS1Q03833 894 aa2.44□□□□□ -2.02
SGD1YLR336C CRF1Q04930 467 aa2.44□□□□□ -2.02
SGD1YLR336C ZPS1Q12512 249 aa2.44□□□□□ -2.02
SGD1YLR336C CPA2P03965 1118 aaKnown RBP2.44□□□□□ -2.02
SGD1YLR336C TPK2P06245 380 aa2.44□□□□□ -2.02
SGD1YLR336C GFA1P14742 717 aaKnown RBP2.44□□□□□ -2.02
SGD1YLR336C CLB4P24871 460 aa2.44□□□□□ -2.02
SGD1YLR336C YMC1P32331 307 aa2.44□□□□□ -2.02
SGD1YLR336C MRS6P32864 603 aaKnown RBP2.44□□□□□ -2.02
SGD1YLR336C PTH2P34222 208 aa2.44□□□□□ -2.02
SGD1YLR336C PIH1P38768 344 aa2.44□□□□□ -2.02
SGD1YLR336C CAB2P40506 365 aa2.44□□□□□ -2.02
SGD1YLR336C SAP185P40856 1058 aa2.44□□□□□ -2.02
SGD1YLR336C SUL2Q12325 893 aa2.44□□□□□ -2.02
SGD1YLR336C MIS1P09440 975 aaKnown RBP2.43□□□□□ -2.02
SGD1YLR336C AMD2P22580 549 aa2.43□□□□□ -2.02
SGD1YLR336C ARP2P32381 391 aaKnown RBP2.43□□□□□ -2.02
SGD1YLR336C BEM3P32873 1128 aa2.43□□□□□ -2.02
SGD1YLR336C VPS8P39702 1274 aa2.43□□□□□ -2.02
SGD1YLR336C YEL020CP39994 560 aa2.43□□□□□ -2.02
SGD1YLR336C BNA1P47096 177 aa2.43□□□□□ -2.02
SGD1YLR336C TAM41P53230 385 aa2.43□□□□□ -2.02
SGD1YLR336C COQ6P53318 479 aa2.43□□□□□ -2.02
SGD1YLR336C VMS1Q04311 632 aaKnown RBP2.43□□□□□ -2.02
SGD1YLR336C ARG7Q04728 441 aa2.43□□□□□ -2.02
SGD1YLR336C BLS1Q06071 122 aa2.43□□□□□ -2.02
SGD1YLR336C YDL073WQ07454 984 aa2.43□□□□□ -2.02
SGD1YLR336C PCL8Q08966 492 aa2.43□□□□□ -2.02
SGD1YLR336C TGS1Q12052 315 aa2.43□□□□□ -2.02
SGD1YLR336C Q0010Q9ZZX9 128 aa2.43□□□□□ -2.02
SGD1YLR336C YCL049CP25577 312 aa2.43□□□□□ -2.02
SGD1YLR336C LOT5P34234 306 aa2.43□□□□□ -2.02
SGD1YLR336C IMA1P53051 589 aa2.43□□□□□ -2.02
SGD1YLR336C TRS130Q03660 1102 aa2.43□□□□□ -2.02
SGD1YLR336C ECM16Q04217 1267 aaKnown RBP2.43□□□□□ -2.02
SGD1YLR336C TFC6Q06339 672 aa2.43□□□□□ -2.02
SGD1YLR336C AAC1P04710 309 aa2.42□□□□□ -2.02
SGD1YLR336C WHI2P12611 486 aa2.42□□□□□ -2.02
SGD1YLR336C IFA38P38286 347 aa2.42□□□□□ -2.02
SGD1YLR336C RRT6P53117 311 aaPredicted RBP2.42□□□□□ -2.02
SGD1YLR336C CPR8P53728 308 aa2.42□□□□□ -2.02
SGD1YLR336C ARA2Q04212 335 aa2.42□□□□□ -2.02
SGD1YLR336C NUC1P08466 329 aa2.42□□□□□ -2.02
SGD1YLR336C BIK1P11709 440 aa2.42□□□□□ -2.02
SGD1YLR336C AAD3P25612 363 aa2.42□□□□□ -2.02
SGD1YLR336C YFL015CP43578 164 aa2.42□□□□□ -2.02
SGD1YLR336C STU2P46675 888 aa2.42□□□□□ -2.02
SGD1YLR336C GTR1Q00582 310 aa2.42□□□□□ -2.02
SGD1YLR336C MRPL13Q02204 264 aa2.42□□□□□ -2.02
SGD1YLR336C UBP16Q02863 499 aa2.42□□□□□ -2.02
SGD1YLR336C ATG21Q02887 496 aa2.42□□□□□ -2.02
SGD1YLR336C STP3Q05937 343 aa2.42□□□□□ -2.02
SGD1YLR336C PCD1Q12524 340 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms