RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W AZR1P50080 613 aa6.52□□□□□ -1.37
GEF1YJR040W TAF6P53040 516 aa6.52□□□□□ -1.37
GEF1YJR040W USE1P53146 245 aa6.52□□□□□ -1.37
GEF1YJR040W COP1P53622 1201 aaKnown RBP6.52□□□□□ -1.37
GEF1YJR040W MMT1Q03218 510 aa6.52□□□□□ -1.37
GEF1YJR040W FIN1Q03898 291 aa6.52□□□□□ -1.37
GEF1YJR040W YMR027WQ04371 470 aa6.52□□□□□ -1.37
GEF1YJR040W YDR222WQ04925 415 aa6.52□□□□□ -1.37
GEF1YJR040W RGA2Q06407 1009 aa6.52□□□□□ -1.37
GEF1YJR040W TAF3Q12297 353 aa6.52□□□□□ -1.37
GEF1YJR040W BBP1Q12365 385 aa6.52□□□□□ -1.37
GEF1YJR040W LDB19Q12502 818 aa6.52□□□□□ -1.37
GEF1YJR040W YPT6Q99260 215 aa6.52□□□□□ -1.37
GEF1YJR040W RIF1P29539 1916 aa6.52□□□□□ -1.37
GEF1YJR040W GLN3P18494 730 aa6.51□□□□□ -1.37
GEF1YJR040W TPS2P31688 896 aaKnown RBP6.51□□□□□ -1.37
GEF1YJR040W YLF2P38746 405 aa6.51□□□□□ -1.37
GEF1YJR040W SSZ1P38788 538 aaKnown RBP6.51□□□□□ -1.37
GEF1YJR040W RIC1P40395 1056 aa6.51□□□□□ -1.37
GEF1YJR040W CAB2P40506 365 aa6.51□□□□□ -1.37
GEF1YJR040W ECL1P48235 211 aa6.51□□□□□ -1.37
GEF1YJR040W YGR054WP53235 642 aaKnown RBP6.51□□□□□ -1.37
GEF1YJR040W YGR266WP53326 701 aa6.51□□□□□ -1.37
GEF1YJR040W BNI4P53858 892 aa6.51□□□□□ -1.37
GEF1YJR040W RPL22BP56628 122 aaKnown RBP6.51□□□□□ -1.37
GEF1YJR040W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
GEF1YJR040W MAM3Q12296 706 aa6.51□□□□□ -1.37
GEF1YJR040W SCM3Q12334 223 aa6.51□□□□□ -1.37
GEF1YJR040W RPS3P05750 240 aaKnown RBP6.51□□□□□ -1.37
GEF1YJR040W HIS3P06633 220 aa6.51□□□□□ -1.37
GEF1YJR040W TIF1P10081 395 aaKnown RBP6.51□□□□□ -1.37
GEF1YJR040W HSC82P15108 705 aaKnown RBP6.51□□□□□ -1.37
GEF1YJR040W AAD3P25612 363 aa6.51□□□□□ -1.37
GEF1YJR040W DCP2P53550 970 aaKnown RBP6.51□□□□□ -1.37
GEF1YJR040W TBF1Q02457 562 aa6.51□□□□□ -1.37
GEF1YJR040W HMO1Q03973 246 aaKnown RBP6.51□□□□□ -1.37
GEF1YJR040W DOT1Q04089 582 aaKnown RBP6.51□□□□□ -1.37
GEF1YJR040W IWR1Q07532 353 aaPredicted RBP6.51□□□□□ -1.37
GEF1YJR040W YLR125WQ12138 136 aa6.51□□□□□ -1.37
GEF1YJR040W PCD1Q12524 340 aa6.51□□□□□ -1.37
GEF1YJR040W YML002WP0CF17 737 aa6.5□□□□□ -1.37
GEF1YJR040W POL30P15873 258 aaKnown RBP6.5□□□□□ -1.37
GEF1YJR040W AEP2P22136 580 aa6.5□□□□□ -1.37
GEF1YJR040W MRM1P25270 412 aa6.5□□□□□ -1.37
GEF1YJR040W RCN1P36054 211 aa6.5□□□□□ -1.37
GEF1YJR040W SLM4P38247 162 aa6.5□□□□□ -1.37
GEF1YJR040W YHR054CP38780 354 aa6.5□□□□□ -1.37
GEF1YJR040W SPC97P38863 823 aa6.5□□□□□ -1.37
GEF1YJR040W LAM5P43560 674 aa6.5□□□□□ -1.37
GEF1YJR040W YML6P51998 286 aa6.5□□□□□ -1.37
GEF1YJR040W YNL134CP53912 376 aaKnown RBP6.5□□□□□ -1.37
GEF1YJR040W TMA20P89886 181 aaPredicted RBP6.5□□□□□ -1.37
GEF1YJR040W UIP4Q08926 304 aa6.5□□□□□ -1.37
GEF1YJR040W REP1P03871 373 aa6.5□□□□□ -1.37
GEF1YJR040W URE2P23202 354 aaKnown RBP6.5□□□□□ -1.37
GEF1YJR040W HEM3P28789 327 aa6.5□□□□□ -1.37
GEF1YJR040W GDA1P32621 518 aa6.5□□□□□ -1.37
GEF1YJR040W DUG2P38149 878 aa6.5□□□□□ -1.37
GEF1YJR040W DAN4P47179 1161 aa6.5□□□□□ -1.37
GEF1YJR040W ATP22P50273 684 aaPredicted RBP6.5□□□□□ -1.37
GEF1YJR040W SLU7Q02775 382 aaKnown RBP6.5□□□□□ -1.37
GEF1YJR040W ARP9Q05123 467 aa6.5□□□□□ -1.37
GEF1YJR040W SHS1Q07657 551 aa6.5□□□□□ -1.37
GEF1YJR040W YIG1Q08956 461 aa6.5□□□□□ -1.37
GEF1YJR040W YLR053CQ12026 108 aa6.5□□□□□ -1.37
GEF1YJR040W YBL113CQ7M4S9 792 aa6.5□□□□□ -1.37
GEF1YJR040W MOT1P32333 1867 aa6.5□□□□□ -1.37
GEF1YJR040W ASP3-2P0CX77 362 aa6.49□□□□□ -1.37
GEF1YJR040W ASP3-3P0CX78 362 aa6.49□□□□□ -1.37
GEF1YJR040W ASP3-4P0CX79 362 aa6.49□□□□□ -1.37
GEF1YJR040W ASP3-1P0CZ17 362 aa6.49□□□□□ -1.37
GEF1YJR040W BIO2P32451 375 aa6.49□□□□□ -1.37
GEF1YJR040W WHI3P34761 661 aaKnown RBP6.49□□□□□ -1.37
GEF1YJR040W KDX1P36005 433 aa6.49□□□□□ -1.37
GEF1YJR040W TPO5P36029 618 aa6.49□□□□□ -1.37
GEF1YJR040W POA1P38218 177 aa6.49□□□□□ -1.37
GEF1YJR040W AST2P39945 430 aaKnown RBP6.49□□□□□ -1.37
GEF1YJR040W PFK26P40433 827 aaKnown RBP6.49□□□□□ -1.37
GEF1YJR040W ALT2P52892 507 aa6.49□□□□□ -1.37
GEF1YJR040W MRM2P53123 320 aa6.49□□□□□ -1.37
GEF1YJR040W YGR035CP53222 116 aa6.49□□□□□ -1.37
GEF1YJR040W NOP13P53883 403 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
GEF1YJR040W YPL034WQ03083 165 aa6.49□□□□□ -1.37
GEF1YJR040W RCF1Q03713 159 aa6.49□□□□□ -1.37
GEF1YJR040W YOR059CQ08448 450 aaKnown RBP6.49□□□□□ -1.37
GEF1YJR040W TOM1Q03280 3268 aa6.49□□□□□ -1.37
GEF1YJR040W COX4P04037 155 aa6.49□□□□□ -1.37
GEF1YJR040W RAD10P06838 210 aa6.49□□□□□ -1.37
GEF1YJR040W HSF1P10961 833 aa6.49□□□□□ -1.37
GEF1YJR040W NPP1P25353 742 aa6.49□□□□□ -1.37
GEF1YJR040W NUP120P35729 1037 aa6.49□□□□□ -1.37
GEF1YJR040W SPC42P36094 363 aa6.49□□□□□ -1.37
GEF1YJR040W TBS1P38114 1094 aa6.49□□□□□ -1.37
GEF1YJR040W CBR1P38626 284 aaKnown RBP6.49□□□□□ -1.37
GEF1YJR040W SMF2P38778 549 aa6.49□□□□□ -1.37
GEF1YJR040W SLX8P40072 274 aa6.49□□□□□ -1.37
GEF1YJR040W DPH1P40487 425 aaKnown RBP6.49□□□□□ -1.37
GEF1YJR040W CPR7P47103 393 aa6.49□□□□□ -1.37
GEF1YJR040W TDA5Q06417 326 aaKnown RBP6.49□□□□□ -1.37
GEF1YJR040W PMS1P14242 873 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 128.7 ms