RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W RAD57P25301 460 aa4.85□□□□□ -1.63
NMD3YHR170W MUD1P32605 298 aaKnown RBP4.85□□□□□ -1.63
NMD3YHR170W BCS1P32839 456 aa4.85□□□□□ -1.63
NMD3YHR170W AIM26P32858 118 aa4.85□□□□□ -1.63
NMD3YHR170W CCZ1P38273 704 aa4.85□□□□□ -1.63
NMD3YHR170W YAP1801P38856 637 aa4.85□□□□□ -1.63
NMD3YHR170W PMT3P47190 753 aa4.85□□□□□ -1.63
NMD3YHR170W APT1P49435 187 aaKnown RBP4.85□□□□□ -1.63
NMD3YHR170W ORC5P50874 479 aa4.85□□□□□ -1.63
NMD3YHR170W VID30P53076 958 aa4.85□□□□□ -1.63
NMD3YHR170W YNL146WP53906 100 aa4.85□□□□□ -1.63
NMD3YHR170W VTC3Q02725 835 aa4.85□□□□□ -1.63
NMD3YHR170W MET7Q08645 548 aa4.85□□□□□ -1.63
NMD3YHR170W MPD2Q99316 277 aa4.85□□□□□ -1.63
NMD3YHR170W IME1P21190 360 aa4.84□□□□□ -1.63
NMD3YHR170W EFT1P32324 842 aaKnown RBP4.84□□□□□ -1.63
NMD3YHR170W SPC110P32380 944 aa4.84□□□□□ -1.63
NMD3YHR170W CDC12P32468 407 aaKnown RBP4.84□□□□□ -1.63
NMD3YHR170W PUB1P32588 453 aaKnown RBP RIP-Chip data4.84□□□□□ -1.63not detected
NMD3YHR170W AFR1P33304 620 aa4.84□□□□□ -1.63
NMD3YHR170W JNM1P36224 373 aa4.84□□□□□ -1.63
NMD3YHR170W VID24P38263 362 aa4.84□□□□□ -1.63
NMD3YHR170W IES5P40060 125 aa4.84□□□□□ -1.63
NMD3YHR170W GPP1P41277 250 aaKnown RBP4.84□□□□□ -1.63
NMD3YHR170W HSH155P49955 971 aaKnown RBP4.84□□□□□ -1.63
NMD3YHR170W HSV2P50079 448 aaPredicted RBP4.84□□□□□ -1.63
NMD3YHR170W ERP6P53198 216 aa4.84□□□□□ -1.63
NMD3YHR170W DUS1P53759 423 aaKnown RBP4.84□□□□□ -1.63
NMD3YHR170W YLR297WQ05899 129 aa4.84□□□□□ -1.63
NMD3YHR170W CSR1Q06705 408 aaKnown RBP4.84□□□□□ -1.63
NMD3YHR170W BRE4Q07660 1125 aa4.84□□□□□ -1.63
NMD3YHR170W THI73Q07904 523 aa4.84□□□□□ -1.63
NMD3YHR170W NSI1Q12457 570 aa4.84□□□□□ -1.63
NMD3YHR170W SWI6P09959 803 aa4.83□□□□□ -1.64
NMD3YHR170W UBC1P21734 215 aaKnown RBP4.83□□□□□ -1.64
NMD3YHR170W CBF2P32504 956 aa4.83□□□□□ -1.64
NMD3YHR170W NFU1P32860 256 aa4.83□□□□□ -1.64
NMD3YHR170W BLI1P35727 113 aa4.83□□□□□ -1.64
NMD3YHR170W SET5P38890 526 aaKnown RBP4.83□□□□□ -1.64
NMD3YHR170W YMR124WP39523 943 aaKnown RBP4.83□□□□□ -1.64
NMD3YHR170W NPP2P39997 493 aa4.83□□□□□ -1.64
NMD3YHR170W EFM4P40516 257 aa4.83□□□□□ -1.64
NMD3YHR170W SKP2P42843 763 aa4.83□□□□□ -1.64
NMD3YHR170W RTA1P53047 317 aa4.83□□□□□ -1.64
NMD3YHR170W ALF1P53904 254 aa4.83□□□□□ -1.64
NMD3YHR170W ORC3P54790 616 aa4.83□□□□□ -1.64
NMD3YHR170W SOV1Q04748 898 aa4.83□□□□□ -1.64
NMD3YHR170W DON1Q05610 365 aa4.83□□□□□ -1.64
NMD3YHR170W YPR078CQ06813 372 aa4.83□□□□□ -1.64
NMD3YHR170W RLP24Q07915 199 aaKnown RBP4.83□□□□□ -1.64
NMD3YHR170W SIL1Q08199 421 aa4.83□□□□□ -1.64
NMD3YHR170W NEW1Q08972 1196 aaKnown RBP4.83□□□□□ -1.64
NMD3YHR170W FAP7Q12055 197 aaPredicted RBP4.83□□□□□ -1.64
NMD3YHR170W ZPS1Q12512 249 aa4.83□□□□□ -1.64
NMD3YHR170W ATG11Q12527 1178 aa4.83□□□□□ -1.64
NMD3YHR170W HBN1Q96VH4 193 aa4.83□□□□□ -1.64
NMD3YHR170W INH1P01097 85 aa4.82□□□□□ -1.64
NMD3YHR170W MPH2P0CD99 609 aa4.82□□□□□ -1.64
NMD3YHR170W RPL4AP10664 362 aaKnown RBP4.82□□□□□ -1.64
NMD3YHR170W TOP3P13099 656 aa4.82□□□□□ -1.64
NMD3YHR170W PRP9P19736 530 aaKnown RBP4.82□□□□□ -1.64
NMD3YHR170W NPP1P25353 742 aa4.82□□□□□ -1.64
NMD3YHR170W PEX6P33760 1030 aa4.82□□□□□ -1.64
NMD3YHR170W BET3P36149 193 aa4.82□□□□□ -1.64
NMD3YHR170W OMA1P36163 345 aa4.82□□□□□ -1.64
NMD3YHR170W YBR284WP38150 797 aa4.82□□□□□ -1.64
NMD3YHR170W CAJ1P39101 391 aa4.82□□□□□ -1.64
NMD3YHR170W AFG3P39925 761 aa4.82□□□□□ -1.64
NMD3YHR170W ASN1P49089 572 aaKnown RBP4.82□□□□□ -1.64
NMD3YHR170W RPL4BP49626 362 aaKnown RBP4.82□□□□□ -1.64
NMD3YHR170W CUL3P53202 744 aa4.82□□□□□ -1.64
NMD3YHR170W MDR1P53258 950 aa4.82□□□□□ -1.64
NMD3YHR170W TGL2P54857 326 aa4.82□□□□□ -1.64
NMD3YHR170W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
NMD3YHR170W TRS130Q03660 1102 aa4.82□□□□□ -1.64
NMD3YHR170W SHS1Q07657 551 aa4.82□□□□□ -1.64
NMD3YHR170W MDM38Q08179 573 aa4.82□□□□□ -1.64
NMD3YHR170W NBA1Q08229 501 aaKnown RBP4.82□□□□□ -1.64
NMD3YHR170W RSB1Q08417 382 aa4.82□□□□□ -1.64
NMD3YHR170W PLP2Q12017 286 aa4.82□□□□□ -1.64
NMD3YHR170W OSW2Q12202 724 aa4.82□□□□□ -1.64
NMD3YHR170W TMT1P32643 299 aa4.82□□□□□ -1.64
NMD3YHR170W HSP78P33416 811 aa4.82□□□□□ -1.64
NMD3YHR170W TRZ1P36159 838 aaPredicted RBP4.82□□□□□ -1.64
NMD3YHR170W SMC2P38989 1170 aaKnown RBP4.82□□□□□ -1.64
NMD3YHR170W SAH1P39954 449 aaKnown RBP4.82□□□□□ -1.64
NMD3YHR170W PSF2P40359 213 aa4.82□□□□□ -1.64
NMD3YHR170W MNP1P53163 194 aaPredicted RBP4.82□□□□□ -1.64
NMD3YHR170W BOP3P53958 396 aa4.82□□□□□ -1.64
NMD3YHR170W COG6P53959 839 aa4.82□□□□□ -1.64
NMD3YHR170W DAK1P54838 584 aaKnown RBP4.82□□□□□ -1.64
NMD3YHR170W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
NMD3YHR170W DIG1Q03063 452 aaKnown RBP4.82□□□□□ -1.64
NMD3YHR170W UGO1Q03327 502 aa4.82□□□□□ -1.64
NMD3YHR170W MSC2Q03455 724 aa4.82□□□□□ -1.64
NMD3YHR170W SVS1Q12254 260 aa4.82□□□□□ -1.64
NMD3YHR170W SUT2Q12286 268 aa4.82□□□□□ -1.64
NMD3YHR170W RIB2Q12362 591 aaKnown RBP4.82□□□□□ -1.64
NMD3YHR170W SPS1P08458 490 aa4.81□□□□□ -1.64
NMD3YHR170W ERG11P10614 530 aa4.81□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms