RNA–Protein interactions for RNA: YFR023W

PES4, Transcript of Poly(A) binding protein, suppressor of DNA polymerase epsilon mutation, yeast

Gene PES4, Length 1,836 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PES4	YFR023W	YGR153W	P48238	217 aa		3.14	□□□□□ -1.91
PES4	YFR023W	LYS20	P48570	428 aa	Known RBP	3.14	□□□□□ -1.91
PES4	YFR023W	SDA1	P53313	767 aa	Known RBP	3.14	□□□□□ -1.91
PES4	YFR023W	AAT1	Q01802	451 aa		3.14	□□□□□ -1.91
PES4	YFR023W	NDD1	Q08887	554 aa		3.14	□□□□□ -1.91
PES4	YFR023W	APM4	Q99186	491 aa		3.14	□□□□□ -1.91
PES4	YFR023W	HMG2	P12684	1045 aa		3.13	□□□□□ -1.91
PES4	YFR023W	NOP1	P15646	327 aa	Known RBP	3.13	□□□□□ -1.91
PES4	YFR023W	MTC7	P32633	139 aa		3.13	□□□□□ -1.91
PES4	YFR023W	EHT1	P38295	451 aa		3.13	□□□□□ -1.91
PES4	YFR023W	CIR1	P42940	261 aa		3.13	□□□□□ -1.91
PES4	YFR023W	YDL183C	P48569	320 aa		3.13	□□□□□ -1.91
PES4	YFR023W	SCW10	Q04951	389 aa		3.13	□□□□□ -1.91
PES4	YFR023W	CYK3	Q07533	885 aa		3.13	□□□□□ -1.91
PES4	YFR023W	UBX3	Q12229	455 aa		3.13	□□□□□ -1.91
PES4	YFR023W	YPT1	P01123	206 aa	Known RBP	3.12	□□□□□ -1.91
PES4	YFR023W	GLN4	P13188	809 aa	Known RBP	3.12	□□□□□ -1.91
PES4	YFR023W	TOM20	P35180	183 aa		3.12	□□□□□ -1.91
PES4	YFR023W	RTT107	P38850	1070 aa		3.12	□□□□□ -1.91
PES4	YFR023W	FLO5	P38894	1075 aa		3.12	□□□□□ -1.91
PES4	YFR023W	YIR016W	P40572	265 aa		3.12	□□□□□ -1.91
PES4	YFR023W	YGR161W-C	Q3E744	92 aa		3.12	□□□□□ -1.91
PES4	YFR023W	PNO1	Q99216	274 aa	Known RBP	3.12	□□□□□ -1.91
PES4	YFR023W	SSB1	P11484	613 aa	Known RBP	3.12	□□□□□ -1.91
PES4	YFR023W	OAF3	P36023	863 aa		3.12	□□□□□ -1.91
PES4	YFR023W	UBP12	P39538	1254 aa		3.12	□□□□□ -1.91
PES4	YFR023W	SSB2	P40150	613 aa	Known RBP	3.12	□□□□□ -1.91
PES4	YFR023W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
PES4	YFR023W	ATX2	Q12067	313 aa		3.12	□□□□□ -1.91
PES4	YFR023W	TOP1	P04786	769 aa		3.11	□□□□□ -1.91
PES4	YFR023W	ILS1	P09436	1072 aa	Known RBP	3.11	□□□□□ -1.91
PES4	YFR023W	SEC12	P11655	471 aa		3.11	□□□□□ -1.91
PES4	YFR023W	BET2	P20133	325 aa		3.11	□□□□□ -1.91
PES4	YFR023W	SFP1	P32432	683 aa		3.11	□□□□□ -1.91
PES4	YFR023W	HXT6	P39003	570 aa	Known RBP	3.11	□□□□□ -1.91
PES4	YFR023W	HXT7	P39004	570 aa		3.11	□□□□□ -1.91
PES4	YFR023W	YJR096W	P47137	282 aa		3.11	□□□□□ -1.91
PES4	YFR023W	HFI1	Q12060	488 aa		3.11	□□□□□ -1.91
PES4	YFR023W	PCK1	P10963	549 aa		3.1	□□□□□ -1.91
PES4	YFR023W	YPK1	P12688	680 aa	Known RBP	3.1	□□□□□ -1.91
PES4	YFR023W	DSS4	P32601	143 aa		3.1	□□□□□ -1.91
PES4	YFR023W	FTH1	P38310	465 aa		3.1	□□□□□ -1.91
PES4	YFR023W	LAS21	P40367	830 aa		3.1	□□□□□ -1.91
PES4	YFR023W	GZF3	P42944	551 aa	Known RBP	3.1	□□□□□ -1.91
PES4	YFR023W	DNM1	P54861	757 aa		3.1	□□□□□ -1.91
PES4	YFR023W	PTA1	Q01329	785 aa	Predicted RBP	3.1	□□□□□ -1.91
PES4	YFR023W	YTH1	Q06102	208 aa	Predicted RBP	3.1	□□□□□ -1.91
PES4	YFR023W	DSE3	Q08729	430 aa		3.1	□□□□□ -1.91
PES4	YFR023W	RPS21B	Q3E754	87 aa	Known RBP	3.1	□□□□□ -1.91
PES4	YFR023W	PHO2	P07269	559 aa		3.09	□□□□□ -1.91
PES4	YFR023W	CBP3	P21560	335 aa		3.09	□□□□□ -1.91
PES4	YFR023W	MAK32	P23060	363 aa		3.09	□□□□□ -1.91
PES4	YFR023W	CDC5	P32562	705 aa		3.09	□□□□□ -1.91
PES4	YFR023W	RPT3	P33298	428 aa	Known RBP	3.09	□□□□□ -1.91
PES4	YFR023W	VID28	P40547	921 aa		3.09	□□□□□ -1.91
PES4	YFR023W	YGL081W	P53156	320 aa		3.09	□□□□□ -1.91
PES4	YFR023W	ECM9	Q02202	377 aa		3.09	□□□□□ -1.91
PES4	YFR023W	SNU56	Q03782	492 aa	Known RBP	3.09	□□□□□ -1.91
PES4	YFR023W	UTP14	Q04500	899 aa	Known RBP	3.09	□□□□□ -1.91
PES4	YFR023W	NOP14	Q99207	810 aa	Known RBP	3.09	□□□□□ -1.91
PES4	YFR023W	CDC26	P14724	124 aa		3.09	□□□□□ -1.92
PES4	YFR023W	AEP2	P22136	580 aa		3.09	□□□□□ -1.92
PES4	YFR023W	PRP19	P32523	503 aa	Known RBP	3.09	□□□□□ -1.92
PES4	YFR023W	YIL152W	P40455	235 aa		3.09	□□□□□ -1.92
PES4	YFR023W	NOP2	P40991	618 aa	Known RBP	3.09	□□□□□ -1.92
PES4	YFR023W	RTS3	P53289	263 aa		3.09	□□□□□ -1.92
PES4	YFR023W	SQS1	P53866	767 aa	Known RBP	3.09	□□□□□ -1.92
PES4	YFR023W	YHM2	Q04013	314 aa		3.09	□□□□□ -1.92
PES4	YFR023W	RAD33	Q04231	177 aa		3.09	□□□□□ -1.92
PES4	YFR023W	GET3	Q12154	354 aa	Known RBP	3.09	□□□□□ -1.92
PES4	YFR023W	RPL8A	P17076	256 aa	Known RBP	3.08	□□□□□ -1.92
PES4	YFR023W	DGR2	P32330	852 aa		3.08	□□□□□ -1.92
PES4	YFR023W	DID4	P36108	232 aa		3.08	□□□□□ -1.92
PES4	YFR023W	ENP1	P38333	483 aa	Known RBP	3.08	□□□□□ -1.92
PES4	YFR023W	YEN1	P40028	759 aa		3.08	□□□□□ -1.92
PES4	YFR023W	YNR029C	P53729	429 aa	Known RBP	3.08	□□□□□ -1.92
PES4	YFR023W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
PES4	YFR023W	SDH8	P38345	138 aa		3.07	□□□□□ -1.92
PES4	YFR023W	PEF1	P53238	335 aa		3.07	□□□□□ -1.92
PES4	YFR023W	COG2	P53271	262 aa		3.07	□□□□□ -1.92
PES4	YFR023W	MAM1	P40065	302 aa		3.07	□□□□□ -1.92
PES4	YFR023W	ADR1	P07248	1323 aa		3.07	□□□□□ -1.92
PES4	YFR023W	GDA1	P32621	518 aa		3.06	□□□□□ -1.92
PES4	YFR023W	SCO2	P38072	301 aa		3.06	□□□□□ -1.92
PES4	YFR023W	GND1	P38720	489 aa	Known RBP	3.06	□□□□□ -1.92
PES4	YFR023W	CIN1	P40987	1014 aa		3.06	□□□□□ -1.92
PES4	YFR023W	MNN11	P46985	422 aa	Known RBP	3.06	□□□□□ -1.92
PES4	YFR023W	YNL092W	P53934	400 aa		3.06	□□□□□ -1.92
PES4	YFR023W	YLR281C	Q05863	155 aa		3.06	□□□□□ -1.92
PES4	YFR023W	MLH2	Q07980	695 aa		3.06	□□□□□ -1.92
PES4	YFR023W	YTM1	Q12024	460 aa	Predicted RBP	3.06	□□□□□ -1.92
PES4	YFR023W	CHO2	P05374	869 aa	Known RBP	3.05	□□□□□ -1.92
PES4	YFR023W	PLC1	P32383	869 aa		3.05	□□□□□ -1.92
PES4	YFR023W	KES1	P35844	434 aa	Known RBP	3.05	□□□□□ -1.92
PES4	YFR023W	ARC40	P38328	384 aa	Known RBP	3.05	□□□□□ -1.92
PES4	YFR023W	PAF1	P38351	445 aa		3.05	□□□□□ -1.92
PES4	YFR023W	IMD2	P38697	523 aa	Known RBP	3.05	□□□□□ -1.92
PES4	YFR023W	TES1	P41903	349 aa	Known RBP	3.05	□□□□□ -1.92
PES4	YFR023W	IMD3	P50095	523 aa	Known RBP	3.05	□□□□□ -1.92
PES4	YFR023W	YGL260W	P53056	76 aa		3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms