RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C AIM41Q12032 185 aa5.24□□□□□ -1.57
NUP42YDR192C RPS19AP07280 144 aaKnown RBP5.23□□□□□ -1.57
NUP42YDR192C RPS19BP07281 144 aaPredicted RBP5.23□□□□□ -1.57
NUP42YDR192C ALG7P07286 448 aa5.23□□□□□ -1.57
NUP42YDR192C PRE4P30657 266 aa5.23□□□□□ -1.57
NUP42YDR192C HIS7P33734 552 aaKnown RBP5.23□□□□□ -1.57
NUP42YDR192C PTH2P34222 208 aa5.23□□□□□ -1.57
NUP42YDR192C VPS24P36095 224 aaKnown RBP5.23□□□□□ -1.57
NUP42YDR192C YNG2P38806 282 aaKnown RBP5.23□□□□□ -1.57
NUP42YDR192C RRP8P38961 392 aaKnown RBP5.23□□□□□ -1.57
NUP42YDR192C PRM2P40534 656 aa5.23□□□□□ -1.57
NUP42YDR192C ASK10P48361 1146 aa5.23□□□□□ -1.57
NUP42YDR192C PUS4P48567 403 aaKnown RBP5.23□□□□□ -1.57
NUP42YDR192C PEF1P53238 335 aa5.23□□□□□ -1.57
NUP42YDR192C FDC1Q03034 503 aa5.23□□□□□ -1.57
NUP42YDR192C YKL033W-AQ86ZR7 236 aa5.23□□□□□ -1.57
NUP42YDR192C SNF2P22082 1703 aa5.23□□□□□ -1.57
NUP42YDR192C SIR3P06701 978 aa5.22□□□□□ -1.57
NUP42YDR192C CWH43P25618 953 aa5.22□□□□□ -1.57
NUP42YDR192C SUL1P38359 859 aa5.22□□□□□ -1.57
NUP42YDR192C YLR040CQ07988 224 aa5.22□□□□□ -1.57
NUP42YDR192C IRC13Q08630 104 aa5.22□□□□□ -1.57
NUP42YDR192C NUR1Q12066 484 aa5.22□□□□□ -1.57
NUP42YDR192C ZRT2Q12436 422 aa5.22□□□□□ -1.57
NUP42YDR192C NCB2Q92317 146 aa5.22□□□□□ -1.57
NUP42YDR192C APC1P53886 1748 aa5.21□□□□□ -1.58
NUP42YDR192C HMG2P12684 1045 aa5.21□□□□□ -1.58
NUP42YDR192C MRP7P12687 371 aa5.21□□□□□ -1.58
NUP42YDR192C ABF1P14164 731 aa5.21□□□□□ -1.58
NUP42YDR192C FEN2P25621 512 aaKnown RBP5.21□□□□□ -1.58
NUP42YDR192C BCS1P32839 456 aa5.21□□□□□ -1.58
NUP42YDR192C COS111P38308 924 aa5.21□□□□□ -1.58
NUP42YDR192C EAF5P39995 279 aa5.21□□□□□ -1.58
NUP42YDR192C AIM21P40563 679 aa5.21□□□□□ -1.58
NUP42YDR192C TEL2P53038 688 aa5.21□□□□□ -1.58
NUP42YDR192C YFT2Q06676 274 aa5.21□□□□□ -1.58
NUP42YDR192C CHS5Q12114 671 aaKnown RBP5.21□□□□□ -1.58
NUP42YDR192C ARP7Q12406 477 aa5.21□□□□□ -1.58
NUP42YDR192C PGI1P12709 554 aaKnown RBP5.2□□□□□ -1.58
NUP42YDR192C PHO81P17442 1178 aa5.2□□□□□ -1.58
NUP42YDR192C TGL1P34163 548 aa5.2□□□□□ -1.58
NUP42YDR192C YLF2P38746 405 aa5.2□□□□□ -1.58
NUP42YDR192C FUN12P39730 1002 aaKnown RBP5.2□□□□□ -1.58
NUP42YDR192C GIP4P39732 760 aa5.2□□□□□ -1.58
NUP42YDR192C YIL077CP40508 320 aa5.2□□□□□ -1.58
NUP42YDR192C HIS6P40545 261 aa5.2□□□□□ -1.58
NUP42YDR192C PAN2P53010 1115 aaPredicted RBP5.2□□□□□ -1.58
NUP42YDR192C MNT2P53059 558 aa5.2□□□□□ -1.58
NUP42YDR192C ADE16P54113 591 aaKnown RBP5.2□□□□□ -1.58
NUP42YDR192C ATG16Q03818 150 aa5.2□□□□□ -1.58
NUP42YDR192C TRI1Q05024 226 aa5.2□□□□□ -1.58
NUP42YDR192C YOL073CQ08232 322 aa5.2□□□□□ -1.58
NUP42YDR192C HOS1Q12214 470 aa5.2□□□□□ -1.58
NUP42YDR192C TPM1P17536 199 aaKnown RBP5.19□□□□□ -1.58
NUP42YDR192C PET309P32522 965 aaPredicted RBP5.19□□□□□ -1.58
NUP42YDR192C EAF6P47128 113 aa5.19□□□□□ -1.58
NUP42YDR192C MDR1P53258 950 aa5.19□□□□□ -1.58
NUP42YDR192C SSL2Q00578 843 aa5.19□□□□□ -1.58
NUP42YDR192C CSI1Q04368 295 aa5.19□□□□□ -1.58
NUP42YDR192C GSF2Q04697 403 aaKnown RBP5.19□□□□□ -1.58
NUP42YDR192C YCG1Q06680 1035 aa5.19□□□□□ -1.58
NUP42YDR192C DIB1Q06819 143 aaPredicted RBP5.19□□□□□ -1.58
NUP42YDR192C YOL114CQ12322 202 aa5.19□□□□□ -1.58
NUP42YDR192C TRM13Q12383 476 aa5.19□□□□□ -1.58
NUP42YDR192C TUB2P02557 457 aaKnown RBP5.18□□□□□ -1.58
NUP42YDR192C VAS1P07806 1104 aaKnown RBP5.18□□□□□ -1.58
NUP42YDR192C SEC12P11655 471 aa5.18□□□□□ -1.58
NUP42YDR192C RFC1P38630 861 aaKnown RBP5.18□□□□□ -1.58
NUP42YDR192C YHL017WP38745 532 aa5.18□□□□□ -1.58
NUP42YDR192C SFB3P38810 929 aa5.18□□□□□ -1.58
NUP42YDR192C QRI7P43122 407 aa5.18□□□□□ -1.58
NUP42YDR192C TAH11P47112 604 aa5.18□□□□□ -1.58
NUP42YDR192C FHN1P53279 174 aa5.18□□□□□ -1.58
NUP42YDR192C TEP1P53916 434 aa5.18□□□□□ -1.58
NUP42YDR192C TIM44Q01852 431 aa5.18□□□□□ -1.58
NUP42YDR192C ALE1Q08548 619 aa5.18□□□□□ -1.58
NUP42YDR192C YCR015CP25616 317 aa5.17□□□□□ -1.58
NUP42YDR192C MTC7P32633 139 aa5.17□□□□□ -1.58
NUP42YDR192C MRS6P32864 603 aaKnown RBP5.17□□□□□ -1.58
NUP42YDR192C PHO11P35842 467 aa5.17□□□□□ -1.58
NUP42YDR192C YKL222CP35995 705 aa5.17□□□□□ -1.58
NUP42YDR192C NUP133P36161 1157 aa5.17□□□□□ -1.58
NUP42YDR192C CTP1P38152 299 aa5.17□□□□□ -1.58
NUP42YDR192C PHO12P38693 467 aa5.17□□□□□ -1.58
NUP42YDR192C YHL041WP38730 149 aa5.17□□□□□ -1.58
NUP42YDR192C CRG1P38892 291 aaRIP-Chip data5.17□□□□□ -1.58not detected
NUP42YDR192C SCS2P40075 244 aaKnown RBP5.17□□□□□ -1.58
NUP42YDR192C FTR1P40088 404 aa5.17□□□□□ -1.58
NUP42YDR192C MSE1P48525 536 aa5.17□□□□□ -1.58
NUP42YDR192C PSR2Q07949 397 aa5.17□□□□□ -1.58
NUP42YDR192C YRF1-3P0CX14 1859 aa5.17□□□□□ -1.58
NUP42YDR192C YRF1-7P0CX15 1859 aa5.17□□□□□ -1.58
NUP42YDR192C YRF1-6P53819 1859 aa5.17□□□□□ -1.58
NUP42YDR192C MSS18P08593 268 aa5.16□□□□□ -1.58
NUP42YDR192C MSH1P25846 959 aa5.16□□□□□ -1.58
NUP42YDR192C DHR2P36009 735 aaPredicted RBP5.16□□□□□ -1.58
NUP42YDR192C HRB1P38922 454 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
NUP42YDR192C YEL025CP39991 1188 aa5.16□□□□□ -1.58
NUP42YDR192C YIR014WP40570 242 aa5.16□□□□□ -1.58
NUP42YDR192C MAD2P40958 196 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms