RNA–Protein interactions for RNA: YDL201W

TRM8, Transcript of Noncatalytic subunit of a tRNA methyltransferase complex, yeast

Gene TRM8, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM8	YDL201W	TY1A-JR1	P0CX74	440 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	TY1A-LR3	P0CX75	440 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	TY1A-ML2	P0CX76	440 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	NCP1	P16603	691 aa	Known RBP	5.05	□□□□□ -1.6
TRM8	YDL201W	GAS1	P22146	559 aa	Known RBP	5.05	□□□□□ -1.6
TRM8	YDL201W	PRP22	P24384	1145 aa	Known RBP	5.05	□□□□□ -1.6
TRM8	YDL201W	PRS1	P32895	427 aa	Known RBP	5.05	□□□□□ -1.6
TRM8	YDL201W	NIP100	P33420	868 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	YKR075C	P36155	307 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	TIF5	P38431	405 aa	Known RBP	5.05	□□□□□ -1.6
TRM8	YDL201W	RFC1	P38630	861 aa	Known RBP	5.05	□□□□□ -1.6
TRM8	YDL201W	DUN1	P39009	513 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	SWD1	P39706	426 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	YEL025C	P39991	1188 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	RLP7	P40693	322 aa	Known RBP	5.05	□□□□□ -1.6
TRM8	YDL201W	SLS1	P42900	643 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
TRM8	YDL201W	GYP7	P48365	746 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	UBC9	P50623	157 aa	Predicted RBP	5.05	□□□□□ -1.6
TRM8	YDL201W	ARE2	P53629	642 aa	Known RBP	5.05	□□□□□ -1.6
TRM8	YDL201W	YDR131C	Q03899	556 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	MGR3	Q04472	501 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	DPB4	Q04603	196 aa	Known RBP	5.05	□□□□□ -1.6
TRM8	YDL201W	CDC45	Q08032	650 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	TRM8	Q12009	286 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	TY1A-GR1	Q12085	440 aa		5.05	□□□□□ -1.6
TRM8	YDL201W	RPL11B	Q3E757	174 aa	Predicted RBP	5.05	□□□□□ -1.6
TRM8	YDL201W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.05	□□□□□ -1.6
TRM8	YDL201W	TY1A-OL	Q92392	440 aa	Known RBP	5.05	□□□□□ -1.6
TRM8	YDL201W	KRE5	P22023	1365 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	PSK1	P31374	1356 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	DIF1	O13577	133 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	ARG3	P05150	338 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	MET17	P06106	444 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	PRP28	P23394	588 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	ADP1	P25371	1049 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	GPI10	P30777	616 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	SMI1	P32566	505 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	RIB7	P33312	244 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	REI1	P38344	393 aa	Predicted RBP	5.04	□□□□□ -1.6
TRM8	YDL201W	VPS45	P38932	577 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	SCS2	P40075	244 aa	Known RBP	5.04	□□□□□ -1.6
TRM8	YDL201W	YFL052W	P43551	465 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	FOL2	P51601	243 aa	Known RBP	5.04	□□□□□ -1.6
TRM8	YDL201W	YGR250C	P53316	781 aa	Known RBP	5.04	□□□□□ -1.6
TRM8	YDL201W	RCM1	P53972	490 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	GPD1	Q00055	391 aa	Known RBP	5.04	□□□□□ -1.6
TRM8	YDL201W	MTD1	Q02046	320 aa	Known RBP	5.04	□□□□□ -1.6
TRM8	YDL201W	MAK10	Q02197	733 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	DOT1	Q04089	582 aa	Known RBP	5.04	□□□□□ -1.6
TRM8	YDL201W	ARP9	Q05123	467 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	IWR1	Q07532	353 aa	Predicted RBP	5.04	□□□□□ -1.6
TRM8	YDL201W	ACM1	Q08981	209 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	NSI1	Q12457	570 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	RRP36	Q12481	300 aa	Predicted RBP	5.04	□□□□□ -1.6
TRM8	YDL201W	YML133C	Q03099	1374 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	YLL067C	Q07888	1374 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	YLL066C	Q99208	1374 aa		5.04	□□□□□ -1.6
TRM8	YDL201W	SWI6	P09959	803 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	BET2	P20133	325 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	ATP12	P22135	325 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	MIH1	P23748	554 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	NFS1	P25374	497 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	YCR015C	P25616	317 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	CYS3	P31373	394 aa	Known RBP	5.03	□□□□□ -1.6
TRM8	YDL201W	PRO1	P32264	428 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	MGM1	P32266	881 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	APE3	P37302	537 aa	Known RBP	5.03	□□□□□ -1.6
TRM8	YDL201W	FAT1	P38225	669 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	VPS41	P38959	992 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	LYS14	P40971	790 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	SHR5	P41912	237 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	IRC5	P43610	853 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	ARC1	P46672	376 aa	Known RBP	5.03	□□□□□ -1.6
TRM8	YDL201W	KEL2	P50090	882 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	ART5	P53244	586 aa	Known RBP	5.03	□□□□□ -1.6
TRM8	YDL201W	PIL1	P53252	339 aa	Known RBP	5.03	□□□□□ -1.6
TRM8	YDL201W	RIA1	P53893	1110 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	MEC3	Q02574	474 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	SNO4	Q04902	237 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	RPN7	Q06103	429 aa	Known RBP	5.03	□□□□□ -1.6
TRM8	YDL201W	TFC6	Q06339	672 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	MCH5	Q08777	521 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	HSP33	Q08914	237 aa	Known RBP	5.03	□□□□□ -1.6
TRM8	YDL201W	HSP32	Q08992	237 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	NFI1	Q12216	726 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	PCD1	Q12524	340 aa		5.03	□□□□□ -1.6
TRM8	YDL201W	ADH4	P10127	382 aa		5.02	□□□□□ -1.61
TRM8	YDL201W	CBP3	P21560	335 aa		5.02	□□□□□ -1.61
TRM8	YDL201W	SIR1	P21691	654 aa		5.02	□□□□□ -1.61
TRM8	YDL201W	PRE8	P23639	250 aa		5.02	□□□□□ -1.61
TRM8	YDL201W	POL4	P25615	582 aa		5.02	□□□□□ -1.61
TRM8	YDL201W	ADK2	P26364	225 aa		5.02	□□□□□ -1.61
TRM8	YDL201W	DGR2	P32330	852 aa		5.02	□□□□□ -1.61
TRM8	YDL201W	MIC60	P36112	540 aa		5.02	□□□□□ -1.61
TRM8	YDL201W	YKR018C	P36114	725 aa		5.02	□□□□□ -1.61
TRM8	YDL201W	CCL1	P37366	393 aa		5.02	□□□□□ -1.61
TRM8	YDL201W	ERT1	P38140	529 aa		5.02	□□□□□ -1.61
TRM8	YDL201W	IFA38	P38286	347 aa		5.02	□□□□□ -1.61
TRM8	YDL201W	TSL1	P38427	1098 aa	Known RBP	5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms