RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W GNP1P48813 663 aa2.39□□□□□ -2.03
UBP1YDL122W YGR237CP50089 785 aa2.39□□□□□ -2.03
UBP1YDL122W PYK2P52489 506 aaKnown RBP2.39□□□□□ -2.03
UBP1YDL122W MLC1P53141 149 aa2.39□□□□□ -2.03
UBP1YDL122W RRP6Q12149 733 aaKnown RBP2.39□□□□□ -2.03
UBP1YDL122W RKM5Q12367 367 aa2.39□□□□□ -2.03
UBP1YDL122W TMA17Q12513 150 aa2.39□□□□□ -2.03
UBP1YDL122W TY4A-HQ6Q5P6 413 aa2.39□□□□□ -2.03
UBP1YDL122W HFA1P32874 2273 aa2.39□□□□□ -2.03
UBP1YDL122W DPB3P27344 201 aa2.39□□□□□ -2.03
UBP1YDL122W SLA2P33338 968 aa2.39□□□□□ -2.03
UBP1YDL122W PEX6P33760 1030 aa2.39□□□□□ -2.03
UBP1YDL122W GPD2P41911 440 aaKnown RBP2.39□□□□□ -2.03
UBP1YDL122W LEM3P42838 414 aa2.39□□□□□ -2.03
UBP1YDL122W ASG7P46993 209 aa2.39□□□□□ -2.03
UBP1YDL122W HSV2P50079 448 aaPredicted RBP2.39□□□□□ -2.03
UBP1YDL122W UBA2P52488 636 aa2.39□□□□□ -2.03
UBP1YDL122W RTA1P53047 317 aa2.39□□□□□ -2.03
UBP1YDL122W NNF2P53253 936 aa2.39□□□□□ -2.03
UBP1YDL122W PEX13P80667 386 aa2.39□□□□□ -2.03
UBP1YDL122W SEC5P89102 971 aa2.39□□□□□ -2.03
UBP1YDL122W SRP1Q02821 542 aaKnown RBP2.39□□□□□ -2.03
UBP1YDL122W YPL113CQ02961 396 aa2.39□□□□□ -2.03
UBP1YDL122W MYO5Q04439 1219 aaKnown RBP2.39□□□□□ -2.03
UBP1YDL122W EMG1Q06287 252 aaKnown RBP2.39□□□□□ -2.03
UBP1YDL122W HDA2Q06629 674 aa2.39□□□□□ -2.03
UBP1YDL122W SLX4Q12098 748 aa2.39□□□□□ -2.03
UBP1YDL122W HRT3Q12347 344 aa2.39□□□□□ -2.03
UBP1YDL122W TMA7Q3E764 64 aaKnown RBP2.39□□□□□ -2.03
UBP1YDL122W TCP1P12612 559 aaKnown RBP2.38□□□□□ -2.03
UBP1YDL122W SEC23P15303 768 aaKnown RBP2.38□□□□□ -2.03
UBP1YDL122W SRP54P20424 541 aaKnown RBP2.38□□□□□ -2.03
UBP1YDL122W RSC6P25632 483 aa2.38□□□□□ -2.03
UBP1YDL122W GCD7P32502 381 aaPredicted RBP2.38□□□□□ -2.03
UBP1YDL122W TRM2P33753 639 aa2.38□□□□□ -2.03
UBP1YDL122W RER2P35196 286 aa2.38□□□□□ -2.03
UBP1YDL122W FUI1P38196 639 aa2.38□□□□□ -2.03
UBP1YDL122W DSS1P39112 969 aa2.38□□□□□ -2.03
UBP1YDL122W GIP2P40036 548 aa2.38□□□□□ -2.03
UBP1YDL122W SHQ1P40486 507 aaPredicted RBP2.38□□□□□ -2.03
UBP1YDL122W FIS1P40515 155 aa2.38□□□□□ -2.03
UBP1YDL122W DAS1P47005 663 aa2.38□□□□□ -2.03
UBP1YDL122W YGL242CP53066 181 aa2.38□□□□□ -2.03
UBP1YDL122W YGL140CP53120 1219 aa2.38□□□□□ -2.03
UBP1YDL122W MNP1P53163 194 aaPredicted RBP2.38□□□□□ -2.03
UBP1YDL122W CUL3P53202 744 aa2.38□□□□□ -2.03
UBP1YDL122W DSE4P53753 1117 aa2.38□□□□□ -2.03
UBP1YDL122W SIW14P53965 281 aa2.38□□□□□ -2.03
UBP1YDL122W TIF35Q04067 274 aaKnown RBP2.38□□□□□ -2.03
UBP1YDL122W COX4P04037 155 aa2.38□□□□□ -2.03
UBP1YDL122W POL30P15873 258 aaKnown RBP2.38□□□□□ -2.03
UBP1YDL122W OPI1P21957 404 aa2.38□□□□□ -2.03
UBP1YDL122W VMA4P22203 233 aaKnown RBP2.38□□□□□ -2.03
UBP1YDL122W TRX2P22803 104 aaKnown RBP2.38□□□□□ -2.03
UBP1YDL122W SHE3P38272 425 aaKnown RBP2.38□□□□□ -2.03
UBP1YDL122W MGS1P40151 587 aa2.38□□□□□ -2.03
UBP1YDL122W POL31P46957 487 aa2.38□□□□□ -2.03
UBP1YDL122W PPT1P53043 513 aa2.38□□□□□ -2.03
UBP1YDL122W GUP1P53154 560 aa2.38□□□□□ -2.03
UBP1YDL122W ALO1P54783 526 aaKnown RBP2.38□□□□□ -2.03
UBP1YDL122W ORC4P54791 529 aa2.38□□□□□ -2.03
UBP1YDL122W CWC21Q03375 135 aaKnown RBP2.38□□□□□ -2.03
UBP1YDL122W VHS1Q03785 461 aa2.38□□□□□ -2.03
UBP1YDL122W YOR378WQ08902 515 aa2.38□□□□□ -2.03
UBP1YDL122W SRO7Q12038 1033 aa2.38□□□□□ -2.03
UBP1YDL122W OSW2Q12202 724 aa2.38□□□□□ -2.03
UBP1YDL122W CSF1Q12150 2958 aa2.37□□□□□ -2.03
UBP1YDL122W GLT1Q12680 2145 aaKnown RBP2.37□□□□□ -2.03
UBP1YDL122W RPL7AP05737 244 aaKnown RBP2.37□□□□□ -2.03
UBP1YDL122W TOM70P07213 617 aaKnown RBP2.37□□□□□ -2.03
UBP1YDL122W CWP1P28319 239 aa2.37□□□□□ -2.03
UBP1YDL122W TAF14P35189 244 aa2.37□□□□□ -2.03
UBP1YDL122W BET3P36149 193 aa2.37□□□□□ -2.03
UBP1YDL122W GPI16P38875 610 aa2.37□□□□□ -2.03
UBP1YDL122W SHU2P38957 223 aa2.37□□□□□ -2.03
UBP1YDL122W SNF7P39929 240 aaKnown RBP2.37□□□□□ -2.03
UBP1YDL122W YMR147WP40218 223 aaKnown RBP2.37□□□□□ -2.03
UBP1YDL122W YJR120WP47157 116 aa2.37□□□□□ -2.03
UBP1YDL122W CEG1Q01159 459 aaPredicted RBP2.37□□□□□ -2.03
UBP1YDL122W NOG1Q02892 647 aaKnown RBP2.37□□□□□ -2.03
UBP1YDL122W GIC2Q06648 383 aa2.37□□□□□ -2.03
UBP1YDL122W SOG2Q08817 791 aa2.37□□□□□ -2.03
UBP1YDL122W RPL7BQ12213 244 aaKnown RBP2.37□□□□□ -2.03
UBP1YDL122W HSP42Q12329 375 aa2.37□□□□□ -2.03
UBP1YDL122W TY1A-NL1Q12391 440 aaKnown RBP2.37□□□□□ -2.03
UBP1YDL122W SSA3P09435 649 aaKnown RBP2.37□□□□□ -2.03
UBP1YDL122W INO1P11986 533 aa2.37□□□□□ -2.03
UBP1YDL122W MSH3P25336 1018 aa2.37□□□□□ -2.03
UBP1YDL122W COQ2P32378 372 aa2.37□□□□□ -2.03
UBP1YDL122W TFC3P34111 1160 aa2.37□□□□□ -2.03
UBP1YDL122W PIN4P34217 668 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
UBP1YDL122W OMA1P36163 345 aa2.37□□□□□ -2.03
UBP1YDL122W YHR054CP38780 354 aa2.37□□□□□ -2.03
UBP1YDL122W ERP2P39704 215 aa2.37□□□□□ -2.03
UBP1YDL122W HXT13P39924 564 aa2.37□□□□□ -2.03
UBP1YDL122W TED1P40533 473 aa2.37□□□□□ -2.03
UBP1YDL122W SHE10P53075 577 aa2.37□□□□□ -2.03
UBP1YDL122W SOK2P53438 785 aaPredicted RBP2.37□□□□□ -2.03
UBP1YDL122W HXT17P53631 564 aa2.37□□□□□ -2.03
UBP1YDL122W HXT15P54854 567 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms