RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W SLA2P33338 968 aa8.12□□□□□ -1.11
ABP1YCR088W ECM4P36156 370 aa8.12□□□□□ -1.11
ABP1YCR088W YKR078WP36158 585 aaKnown RBP8.12□□□□□ -1.11
ABP1YCR088W YMC2P38087 329 aa8.12□□□□□ -1.11
ABP1YCR088W CTP1P38152 299 aa8.12□□□□□ -1.11
ABP1YCR088W FRT2P39734 528 aa8.12□□□□□ -1.11
ABP1YCR088W SSP120P39931 234 aaKnown RBP8.12□□□□□ -1.11
ABP1YCR088W HOS4P40480 1083 aa8.12□□□□□ -1.11
ABP1YCR088W YGR283CP53336 341 aaPredicted RBP8.12□□□□□ -1.11
ABP1YCR088W YNL247WP53852 767 aaKnown RBP8.12□□□□□ -1.11
ABP1YCR088W INA17Q02888 182 aa8.12□□□□□ -1.11
ABP1YCR088W BCP1Q06338 283 aa8.12□□□□□ -1.11
ABP1YCR088W IZH4Q99393 312 aa8.12□□□□□ -1.11
ABP1YCR088W PDC5P16467 563 aaKnown RBP8.12□□□□□ -1.11
ABP1YCR088W AMS1P22855 1083 aa8.12□□□□□ -1.11
ABP1YCR088W AIM26P32858 118 aa8.12□□□□□ -1.11
ABP1YCR088W RRP14P36080 434 aaKnown RBP8.12□□□□□ -1.11
ABP1YCR088W RRN7P40992 514 aa8.12□□□□□ -1.11
ABP1YCR088W CCT8P47079 568 aaKnown RBP8.12□□□□□ -1.11
ABP1YCR088W RKM2Q03942 479 aa8.12□□□□□ -1.11
ABP1YCR088W VPS5Q92331 675 aa8.12□□□□□ -1.11
ABP1YCR088W AI5_ALPHAQ9ZZX1 630 aa8.12□□□□□ -1.11
ABP1YCR088W UBR2Q07963 1872 aa8.11□□□□□ -1.11
ABP1YCR088W ENO1P00924 437 aaKnown RBP8.11□□□□□ -1.11
ABP1YCR088W PRP6P19735 899 aaPredicted RBP8.11□□□□□ -1.11
ABP1YCR088W URA4P20051 364 aa8.11□□□□□ -1.11
ABP1YCR088W URA10P30402 227 aa8.11□□□□□ -1.11
ABP1YCR088W RTG2P32608 588 aaKnown RBP8.11□□□□□ -1.11
ABP1YCR088W NOP4P37838 685 aaKnown RBP8.11□□□□□ -1.11
ABP1YCR088W GEM1P39722 662 aa8.11□□□□□ -1.11
ABP1YCR088W PDS1P40316 373 aaPredicted RBP8.11□□□□□ -1.11
ABP1YCR088W DIM1P41819 318 aaKnown RBP8.11□□□□□ -1.11
ABP1YCR088W RRT5P43607 289 aa8.11□□□□□ -1.11
ABP1YCR088W COG2P53271 262 aa8.11□□□□□ -1.11
ABP1YCR088W SLG1P54867 378 aa8.11□□□□□ -1.11
ABP1YCR088W SLU7Q02775 382 aaKnown RBP8.11□□□□□ -1.11
ABP1YCR088W RSA3Q05942 220 aaKnown RBP8.11□□□□□ -1.11
ABP1YCR088W ENT4Q07872 247 aa8.11□□□□□ -1.11
ABP1YCR088W THI21Q08975 551 aa8.11□□□□□ -1.11
ABP1YCR088W MDM20Q12387 796 aaKnown RBP8.11□□□□□ -1.11
ABP1YCR088W YMR030W-AQ3E760 96 aa8.11□□□□□ -1.11
ABP1YCR088W ERR1P0CX10 437 aa8.1□□□□□ -1.11
ABP1YCR088W ERR2P0CX11 437 aa8.1□□□□□ -1.11
ABP1YCR088W VAC17P25591 423 aa8.1□□□□□ -1.11
ABP1YCR088W RPL5P26321 297 aaKnown RBP8.1□□□□□ -1.11
ABP1YCR088W PUP2P32379 260 aa8.1□□□□□ -1.11
ABP1YCR088W SPR1P32603 445 aa8.1□□□□□ -1.11
ABP1YCR088W SMY2P32909 740 aaKnown RBP8.1□□□□□ -1.11
ABP1YCR088W KES1P35844 434 aaKnown RBP8.1□□□□□ -1.11
ABP1YCR088W FLR1P38124 548 aa8.1□□□□□ -1.11
ABP1YCR088W SLM4P38247 162 aa8.1□□□□□ -1.11
ABP1YCR088W GUA1P38625 525 aaKnown RBP8.1□□□□□ -1.11
ABP1YCR088W SEC31P38968 1273 aaKnown RBP8.1□□□□□ -1.11
ABP1YCR088W DSE1P40077 573 aa8.1□□□□□ -1.11
ABP1YCR088W ERR3P42222 437 aa8.1□□□□□ -1.11
ABP1YCR088W NUP84P52891 726 aa8.1□□□□□ -1.11
ABP1YCR088W YTP1P53584 459 aa8.1□□□□□ -1.11
ABP1YCR088W AAD15Q08361 143 aa8.1□□□□□ -1.11
ABP1YCR088W KCS1Q12494 1050 aa8.1□□□□□ -1.11
ABP1YCR088W RGS2Q99188 309 aa8.1□□□□□ -1.11
ABP1YCR088W ATP2P00830 511 aaKnown RBP8.1□□□□□ -1.11
ABP1YCR088W MPH2P0CD99 609 aa8.1□□□□□ -1.11
ABP1YCR088W HEM12P32347 362 aaPredicted RBP8.1□□□□□ -1.11
ABP1YCR088W SKG6P32900 734 aaPredicted RBP8.1□□□□□ -1.11
ABP1YCR088W HSL7P38274 827 aa8.1□□□□□ -1.11
ABP1YCR088W TGL3P40308 642 aa8.1□□□□□ -1.11
ABP1YCR088W NMA2P53204 395 aa8.1□□□□□ -1.11
ABP1YCR088W YGR127WP53275 312 aa8.1□□□□□ -1.11
ABP1YCR088W YPR003CP53394 754 aa8.1□□□□□ -1.11
ABP1YCR088W RCF2P53721 224 aa8.1□□□□□ -1.11
ABP1YCR088W YNL108CP53929 270 aa8.1□□□□□ -1.11
ABP1YCR088W PRO2P54885 456 aaKnown RBP8.1□□□□□ -1.11
ABP1YCR088W ULP1Q02724 621 aa8.1□□□□□ -1.11
ABP1YCR088W MZM1Q03429 123 aaPredicted RBP8.1□□□□□ -1.11
ABP1YCR088W TPO1Q07824 586 aa8.1□□□□□ -1.11
ABP1YCR088W CFT2Q12102 859 aaPredicted RBP8.1□□□□□ -1.11
ABP1YCR088W TAF3Q12297 353 aa8.1□□□□□ -1.11
ABP1YCR088W ADE4P04046 510 aaKnown RBP8.09□□□□□ -1.11
ABP1YCR088W TAL1P15019 335 aaKnown RBP8.09□□□□□ -1.11
ABP1YCR088W ADY2P25613 283 aa8.09□□□□□ -1.11
ABP1YCR088W KDX1P36005 433 aa8.09□□□□□ -1.11
ABP1YCR088W SHU2P38957 223 aa8.09□□□□□ -1.11
ABP1YCR088W LYS9P38999 446 aa8.09□□□□□ -1.11
ABP1YCR088W PIK1P39104 1066 aa8.09□□□□□ -1.11
ABP1YCR088W HPM1P40481 377 aa8.09□□□□□ -1.11
ABP1YCR088W SET2P46995 733 aaKnown RBP8.09□□□□□ -1.11
ABP1YCR088W ASI2P53895 289 aa8.09□□□□□ -1.11
ABP1YCR088W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
ABP1YCR088W YPR089WO13585 888 aa8.08□□□□□ -1.12
ABP1YCR088W YPK1P12688 680 aaKnown RBP8.08□□□□□ -1.12
ABP1YCR088W TYR1P20049 452 aa8.08□□□□□ -1.12
ABP1YCR088W PKC1P24583 1151 aa8.08□□□□□ -1.12
ABP1YCR088W GDA1P32621 518 aa8.08□□□□□ -1.12
ABP1YCR088W HSP78P33416 811 aa8.08□□□□□ -1.12
ABP1YCR088W YHR054CP38780 354 aa8.08□□□□□ -1.12
ABP1YCR088W RSC30P38781 883 aa8.08□□□□□ -1.12
ABP1YCR088W LAM1P38851 1228 aa8.08□□□□□ -1.12
ABP1YCR088W NOP9P47077 666 aaKnown RBP8.08□□□□□ -1.12
ABP1YCR088W RFX1P48743 811 aa8.08□□□□□ -1.12
ABP1YCR088W ASN2P49090 572 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms