RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	YPT10	P38146	199 aa		4.76	□□□□□ -1.65
APA1	YCL050C	STB5	P38699	743 aa		4.76	□□□□□ -1.65
APA1	YCL050C	SCS2	P40075	244 aa	Known RBP	4.76	□□□□□ -1.65
APA1	YCL050C	YFL015C	P43578	164 aa		4.76	□□□□□ -1.65
APA1	YCL050C	PIP2	P52960	996 aa		4.76	□□□□□ -1.65
APA1	YCL050C	DIN7	Q12086	430 aa		4.76	□□□□□ -1.65
APA1	YCL050C	SEC3	P33332	1336 aa	Known RBP	4.75	□□□□□ -1.65
APA1	YCL050C	PGK1	P00560	416 aa	Known RBP	4.75	□□□□□ -1.65
APA1	YCL050C	CBP3	P21560	335 aa		4.75	□□□□□ -1.65
APA1	YCL050C	TGL1	P34163	548 aa		4.75	□□□□□ -1.65
APA1	YCL050C	GSM1	P42950	618 aa		4.75	□□□□□ -1.65
APA1	YCL050C	IDS2	P46958	469 aa		4.75	□□□□□ -1.65
APA1	YCL050C	IRC3	Q06683	689 aa		4.75	□□□□□ -1.65
APA1	YCL050C	CRT10	Q08226	957 aa		4.75	□□□□□ -1.65
APA1	YCL050C	DBP10	Q12389	995 aa	Known RBP	4.75	□□□□□ -1.65
APA1	YCL050C	VAS1	P07806	1104 aa	Known RBP	4.74	□□□□□ -1.65
APA1	YCL050C	APN1	P22936	367 aa		4.74	□□□□□ -1.65
APA1	YCL050C	SDH8	P38345	138 aa		4.74	□□□□□ -1.65
APA1	YCL050C	LNP1	P38878	278 aa		4.74	□□□□□ -1.65
APA1	YCL050C	COS12	P53053	380 aa		4.74	□□□□□ -1.65
APA1	YCL050C	CNM67	P53865	581 aa	Known RBP	4.74	□□□□□ -1.65
APA1	YCL050C	SND1	Q04007	877 aa		4.74	□□□□□ -1.65
APA1	YCL050C	TRI1	Q05024	226 aa		4.74	□□□□□ -1.65
APA1	YCL050C	AHA1	Q12449	350 aa	Known RBP	4.74	□□□□□ -1.65
APA1	YCL050C	CTT1	P06115	562 aa		4.73	□□□□□ -1.65
APA1	YCL050C	AQY1	P0CD91	305 aa		4.73	□□□□□ -1.65
APA1	YCL050C	CDC5	P32562	705 aa		4.73	□□□□□ -1.65
APA1	YCL050C	TOM20	P35180	183 aa		4.73	□□□□□ -1.65
APA1	YCL050C	APD1	P38281	316 aa		4.73	□□□□□ -1.65
APA1	YCL050C	EXO1	P39875	702 aa		4.73	□□□□□ -1.65
APA1	YCL050C	VFA1	P40080	203 aa		4.73	□□□□□ -1.65
APA1	YCL050C	XBP1	P40489	647 aa		4.73	□□□□□ -1.65
APA1	YCL050C	ASK10	P48361	1146 aa		4.73	□□□□□ -1.65
APA1	YCL050C	ATP23	P53722	227 aa		4.73	□□□□□ -1.65
APA1	YCL050C	YNL034W	P53963	612 aa		4.73	□□□□□ -1.65
APA1	YCL050C	TMA7	Q3E764	64 aa	Known RBP	4.73	□□□□□ -1.65
APA1	YCL050C	PTP1	P25044	335 aa		4.72	□□□□□ -1.65
APA1	YCL050C	MTG2	P38860	518 aa		4.72	□□□□□ -1.65
APA1	YCL050C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
APA1	YCL050C	AFT2	Q08957	416 aa		4.72	□□□□□ -1.65
APA1	YCL050C	NIC96	P34077	839 aa		4.71	□□□□□ -1.66
APA1	YCL050C	GRX7	P38068	203 aa		4.71	□□□□□ -1.66
APA1	YCL050C	RRP8	P38961	392 aa	Known RBP	4.71	□□□□□ -1.66
APA1	YCL050C	PCL8	Q08966	492 aa		4.71	□□□□□ -1.66
APA1	YCL050C	MPD2	Q99316	277 aa		4.71	□□□□□ -1.66
APA1	YCL050C	BI2	P03873	423 aa		4.7	□□□□□ -1.66
APA1	YCL050C	LTP1	P40347	161 aa		4.7	□□□□□ -1.66
APA1	YCL050C	TRS31	Q03337	283 aa		4.7	□□□□□ -1.66
APA1	YCL050C	ENT2	Q05785	613 aa		4.7	□□□□□ -1.66
APA1	YCL050C	ADH4	P10127	382 aa		4.69	□□□□□ -1.66
APA1	YCL050C	MBR1	P23493	339 aa		4.69	□□□□□ -1.66
APA1	YCL050C	YLF2	P38746	405 aa		4.69	□□□□□ -1.66
APA1	YCL050C	SWD1	P39706	426 aa		4.69	□□□□□ -1.66
APA1	YCL050C	LAS21	P40367	830 aa		4.69	□□□□□ -1.66
APA1	YCL050C	TDA10	P42938	290 aa		4.69	□□□□□ -1.66
APA1	YCL050C	PEX8	P53248	589 aa		4.69	□□□□□ -1.66
APA1	YCL050C	COG2	P53271	262 aa		4.69	□□□□□ -1.66
APA1	YCL050C	AAT1	Q01802	451 aa		4.69	□□□□□ -1.66
APA1	YCL050C	RPS7A	P26786	190 aa	Known RBP	4.68	□□□□□ -1.66
APA1	YCL050C	PRE2	P30656	287 aa	Known RBP	4.68	□□□□□ -1.66
APA1	YCL050C	GDA1	P32621	518 aa		4.68	□□□□□ -1.66
APA1	YCL050C	BEM3	P32873	1128 aa		4.68	□□□□□ -1.66
APA1	YCL050C	MAM1	P40065	302 aa		4.68	□□□□□ -1.66
APA1	YCL050C	POL31	P46957	487 aa		4.68	□□□□□ -1.66
APA1	YCL050C	NET1	P47035	1189 aa		4.68	□□□□□ -1.66
APA1	YCL050C	BNA3	P47039	444 aa	Known RBP	4.68	□□□□□ -1.66
APA1	YCL050C	PUS4	P48567	403 aa	Known RBP	4.68	□□□□□ -1.66
APA1	YCL050C	TAN1	P53072	289 aa	Predicted RBP	4.68	□□□□□ -1.66
APA1	YCL050C	TGL2	P54857	326 aa		4.68	□□□□□ -1.66
APA1	YCL050C	ACS1	Q01574	713 aa		4.68	□□□□□ -1.66
APA1	YCL050C	VPS64	Q03944	604 aa		4.68	□□□□□ -1.66
APA1	YCL050C	CRD1	Q07560	283 aa		4.68	□□□□□ -1.66
APA1	YCL050C	YER175W-A	Q8TGU4	54 aa		4.68	□□□□□ -1.66
APA1	YCL050C	GSY2	P27472	705 aa		4.67	□□□□□ -1.66
APA1	YCL050C	PRP45	P28004	379 aa	Predicted RBP	4.67	□□□□□ -1.66
APA1	YCL050C	ULP2	P40537	1034 aa	Predicted RBP	4.67	□□□□□ -1.66
APA1	YCL050C	IMA5	P40884	581 aa		4.67	□□□□□ -1.66
APA1	YCL050C	UBP16	Q02863	499 aa		4.67	□□□□□ -1.66
APA1	YCL050C	CRF1	Q04930	467 aa		4.67	□□□□□ -1.66
APA1	YCL050C	RDL1	Q12305	139 aa	Known RBP	4.67	□□□□□ -1.66
APA1	YCL050C	ARP7	Q12406	477 aa		4.67	□□□□□ -1.66
APA1	YCL050C	URE2	P23202	354 aa	Known RBP	4.66	□□□□□ -1.66
APA1	YCL050C	YCR061W	P25639	631 aa		4.66	□□□□□ -1.66
APA1	YCL050C	YKL133C	P36066	463 aa		4.66	□□□□□ -1.66
APA1	YCL050C	SNO3	P43544	222 aa		4.66	□□□□□ -1.66
APA1	YCL050C	BPL1	P48445	690 aa	Predicted RBP	4.66	□□□□□ -1.66
APA1	YCL050C	YNL092W	P53934	400 aa		4.66	□□□□□ -1.66
APA1	YCL050C	YNL058C	P53947	316 aa		4.66	□□□□□ -1.66
APA1	YCL050C	YPL071C	Q02864	156 aa		4.66	□□□□□ -1.66
APA1	YCL050C	YML119W	Q03208	357 aa		4.66	□□□□□ -1.66
APA1	YCL050C	RAD33	Q04231	177 aa		4.66	□□□□□ -1.66
APA1	YCL050C	BSP1	Q06604	576 aa		4.66	□□□□□ -1.66
APA1	YCL050C	AAD4	Q07747	329 aa		4.66	□□□□□ -1.66
APA1	YCL050C	CHO2	P05374	869 aa	Known RBP	4.65	□□□□□ -1.67
APA1	YCL050C	YJU2	P28320	278 aa	Predicted RBP	4.65	□□□□□ -1.67
APA1	YCL050C	SAE2	P46946	345 aa		4.65	□□□□□ -1.67
APA1	YCL050C	NMD5	P46970	1048 aa		4.65	□□□□□ -1.67
APA1	YCL050C	GLO1	P50107	326 aa		4.65	□□□□□ -1.67
APA1	YCL050C	ERG13	P54839	491 aa	Known RBP	4.65	□□□□□ -1.67
APA1	YCL050C	CEG1	Q01159	459 aa	Predicted RBP	4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms