RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C DSS4P32601 143 aa3.48□□□□□ -1.85
RPB5YBR154C RRP8P38961 392 aaKnown RBP3.48□□□□□ -1.85
RPB5YBR154C YIL024CP40543 189 aa3.48□□□□□ -1.85
RPB5YBR154C PEF1P53238 335 aa3.48□□□□□ -1.85
RPB5YBR154C PCL8Q08966 492 aa3.48□□□□□ -1.85
RPB5YBR154C PCK1P10963 549 aa3.47□□□□□ -1.85
RPB5YBR154C YJU2P28320 278 aaPredicted RBP3.47□□□□□ -1.85
RPB5YBR154C MTD1Q02046 320 aaKnown RBP3.47□□□□□ -1.85
RPB5YBR154C HRD3Q05787 833 aa3.47□□□□□ -1.85
RPB5YBR154C HER1Q12276 1246 aa3.47□□□□□ -1.85
RPB5YBR154C RMA1P36001 430 aaKnown RBP3.46□□□□□ -1.86
RPB5YBR154C SRP68P38687 599 aaKnown RBP3.46□□□□□ -1.86
RPB5YBR154C MDR1P53258 950 aa3.46□□□□□ -1.86
RPB5YBR154C COP1P53622 1201 aaKnown RBP3.46□□□□□ -1.86
RPB5YBR154C CYK3Q07533 885 aa3.46□□□□□ -1.86
RPB5YBR154C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
RPB5YBR154C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
RPB5YBR154C AIM44Q99299 758 aa3.46□□□□□ -1.86
RPB5YBR154C CBP3P21560 335 aa3.45□□□□□ -1.86
RPB5YBR154C COQ3P27680 312 aa3.45□□□□□ -1.86
RPB5YBR154C HXT4P32467 576 aa3.45□□□□□ -1.86
RPB5YBR154C NMD2P38798 1089 aaKnown RBP3.45□□□□□ -1.86
RPB5YBR154C LAS21P40367 830 aa3.45□□□□□ -1.86
RPB5YBR154C CIR1P42940 261 aa3.45□□□□□ -1.86
RPB5YBR154C NGL1Q08213 363 aaKnown RBP3.45□□□□□ -1.86
RPB5YBR154C VPS5Q92331 675 aa3.45□□□□□ -1.86
RPB5YBR154C PNO1Q99216 274 aaKnown RBP3.45□□□□□ -1.86
RPB5YBR154C CET1O13297 549 aaPredicted RBP3.44□□□□□ -1.86
RPB5YBR154C CWH43P25618 953 aa3.44□□□□□ -1.86
RPB5YBR154C CDC5P32562 705 aa3.44□□□□□ -1.86
RPB5YBR154C PEA2P40091 420 aa3.44□□□□□ -1.86
RPB5YBR154C COG2P53271 262 aa3.44□□□□□ -1.86
RPB5YBR154C FAP7Q12055 197 aaPredicted RBP3.44□□□□□ -1.86
RPB5YBR154C ILS1P09436 1072 aaKnown RBP3.43□□□□□ -1.86
RPB5YBR154C YER190C-BP0CX94 160 aa3.43□□□□□ -1.86
RPB5YBR154C YEL077W-AP0CX95 160 aa3.43□□□□□ -1.86
RPB5YBR154C YGR296C-BP0CX96 160 aa3.43□□□□□ -1.86
RPB5YBR154C YPL283W-BP0CX97 160 aa3.43□□□□□ -1.86
RPB5YBR154C YPR204C-AP0CX98 160 aa3.43□□□□□ -1.86
RPB5YBR154C SDH8P38345 138 aa3.43□□□□□ -1.86
RPB5YBR154C RAD26P40352 1085 aa3.43□□□□□ -1.86
RPB5YBR154C GPP1P41277 250 aaKnown RBP3.43□□□□□ -1.86
RPB5YBR154C RAD33Q04231 177 aa3.43□□□□□ -1.86
RPB5YBR154C BUD7Q08754 746 aa3.43□□□□□ -1.86
RPB5YBR154C GDA1P32621 518 aa3.42□□□□□ -1.86
RPB5YBR154C GCS1P35197 352 aa3.42□□□□□ -1.86
RPB5YBR154C FTH1P38310 465 aa3.42□□□□□ -1.86
RPB5YBR154C MAM1P40065 302 aa3.42□□□□□ -1.86
RPB5YBR154C YGR237CP50089 785 aa3.42□□□□□ -1.86
RPB5YBR154C YNR029CP53729 429 aaKnown RBP3.42□□□□□ -1.86
RPB5YBR154C SNU56Q03782 492 aaKnown RBP3.42□□□□□ -1.86
RPB5YBR154C YEL076C-AP0CX16 216 aa3.41□□□□□ -1.86
RPB5YBR154C YLR464WP0CX17 216 aa3.41□□□□□ -1.86
RPB5YBR154C ATO2P32907 282 aa3.41□□□□□ -1.86
RPB5YBR154C MTG2P38860 518 aa3.41□□□□□ -1.86
RPB5YBR154C CCT4P39078 528 aaKnown RBP3.41□□□□□ -1.86
RPB5YBR154C YEL076CP39971 216 aa3.41□□□□□ -1.86
RPB5YBR154C YAT2P40017 923 aa3.41□□□□□ -1.86
RPB5YBR154C GPG1P53130 126 aa3.41□□□□□ -1.86
RPB5YBR154C AAT1Q01802 451 aa3.41□□□□□ -1.86
RPB5YBR154C SKY1Q03656 742 aa3.41□□□□□ -1.86
RPB5YBR154C SRL1Q08673 210 aa3.41□□□□□ -1.86
RPB5YBR154C YPR027CQ12079 277 aa3.41□□□□□ -1.86
RPB5YBR154C RMP1Q12530 201 aa3.41□□□□□ -1.86
RPB5YBR154C YGR161W-CQ3E744 92 aa3.41□□□□□ -1.86
RPB5YBR154C YOR111WQ99210 232 aa3.41□□□□□ -1.86
RPB5YBR154C PLC1P32383 869 aa3.4□□□□□ -1.87
RPB5YBR154C RPT3P33298 428 aaKnown RBP3.4□□□□□ -1.87
RPB5YBR154C FLO5P38894 1075 aa3.4□□□□□ -1.87
RPB5YBR154C YIR016WP40572 265 aa3.4□□□□□ -1.87
RPB5YBR154C MDV1P47025 714 aa3.4□□□□□ -1.87
RPB5YBR154C YNL092WP53934 400 aa3.4□□□□□ -1.87
RPB5YBR154C BOP3P53958 396 aa3.4□□□□□ -1.87
RPB5YBR154C RPL15BP54780 204 aaPredicted RBP3.4□□□□□ -1.87
RPB5YBR154C VTC3Q02725 835 aa3.4□□□□□ -1.87
RPB5YBR154C SNA4Q07549 140 aa3.4□□□□□ -1.87
RPB5YBR154C CHO2P05374 869 aaKnown RBP3.39□□□□□ -1.87
RPB5YBR154C MAK32P23060 363 aa3.39□□□□□ -1.87
RPB5YBR154C AIM17P23180 465 aaKnown RBP3.39□□□□□ -1.87
RPB5YBR154C YCP4P25349 247 aaKnown RBP3.39□□□□□ -1.87
RPB5YBR154C TOM71P38825 639 aaKnown RBP3.39□□□□□ -1.87
RPB5YBR154C LNP1P38878 278 aa3.39□□□□□ -1.87
RPB5YBR154C NOP2P40991 618 aaKnown RBP3.39□□□□□ -1.87
RPB5YBR154C IRC5P43610 853 aa3.39□□□□□ -1.87
RPB5YBR154C YOR389WQ08912 624 aa3.39□□□□□ -1.87
RPB5YBR154C ATX2Q12067 313 aa3.39□□□□□ -1.87
RPB5YBR154C HOS1Q12214 470 aa3.39□□□□□ -1.87
RPB5YBR154C ATP12P22135 325 aa3.38□□□□□ -1.87
RPB5YBR154C SER1P33330 395 aaKnown RBP3.38□□□□□ -1.87
RPB5YBR154C SCO2P38072 301 aa3.38□□□□□ -1.87
RPB5YBR154C IMD2P38697 523 aaKnown RBP3.38□□□□□ -1.87
RPB5YBR154C CIN1P40987 1014 aa3.38□□□□□ -1.87
RPB5YBR154C MAF1P41910 395 aa3.38□□□□□ -1.87
RPB5YBR154C DUG1P43616 481 aaKnown RBP3.38□□□□□ -1.87
RPB5YBR154C YJR142WP47173 342 aa3.38□□□□□ -1.87
RPB5YBR154C LYS20P48570 428 aaKnown RBP3.38□□□□□ -1.87
RPB5YBR154C IMD3P50095 523 aaKnown RBP3.38□□□□□ -1.87
RPB5YBR154C KES1P35844 434 aaKnown RBP3.37□□□□□ -1.87
RPB5YBR154C FPR3P38911 411 aaKnown RBP3.37□□□□□ -1.87
RPB5YBR154C COS12P53053 380 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms