RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP6	YBR055C	GCD7	P32502	381 aa	Predicted RBP	2.61	□□□□□ -1.99
PRP6	YBR055C	COS111	P38308	924 aa		2.61	□□□□□ -1.99
PRP6	YBR055C	LYS9	P38999	446 aa		2.61	□□□□□ -1.99
PRP6	YBR055C	NPR2	P39923	615 aa		2.61	□□□□□ -1.99
PRP6	YBR055C	YEL025C	P39991	1188 aa		2.61	□□□□□ -1.99
PRP6	YBR055C	TMN3	P40071	706 aa		2.61	□□□□□ -1.99
PRP6	YBR055C	CHA4	P43634	648 aa		2.61	□□□□□ -1.99
PRP6	YBR055C	ARE2	P53629	642 aa	Known RBP	2.61	□□□□□ -1.99
PRP6	YBR055C	THI22	Q06490	572 aa		2.61	□□□□□ -1.99
PRP6	YBR055C	ENT4	Q07872	247 aa		2.61	□□□□□ -1.99
PRP6	YBR055C	NBP2	Q12163	236 aa		2.61	□□□□□ -1.99
PRP6	YBR055C	YDL177C	Q12257	170 aa		2.61	□□□□□ -1.99
PRP6	YBR055C	SUL2	Q12325	893 aa		2.61	□□□□□ -1.99
PRP6	YBR055C	YBR126W-A	Q8TGU7	68 aa		2.61	□□□□□ -1.99
PRP6	YBR055C	ARG3	P05150	338 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	MET17	P06106	444 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	TY2A-LR1	P0C2J4	438 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	TY2A-F	P0CX61	438 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	TY2A-GR2	P0CX62	438 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	TY2A-C	P25383	438 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	CDC60	P26637	1090 aa	Known RBP	2.6	□□□□□ -1.99
PRP6	YBR055C	PRE2	P30656	287 aa	Known RBP	2.6	□□□□□ -1.99
PRP6	YBR055C	TOA1	P32773	286 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	MTH1	P35198	433 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	BYE1	P36106	594 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	IST3	P40565	148 aa	Predicted RBP	2.6	□□□□□ -1.99
PRP6	YBR055C	TAM41	P53230	385 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	SNO2	P53823	222 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	YSA1	Q01976	231 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	YPL071C	Q02864	156 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	TY2A-DR2	Q03483	438 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	HOF1	Q05080	669 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	TY2A-B	Q12260	438 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	TY2A-OR2	Q12293	438 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	TY2A-DR1	Q12392	438 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	TY2A-OR1	Q12439	438 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	TY2A-DR3	Q99303	438 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	ATP2	P00830	511 aa	Known RBP	2.6	□□□□□ -1.99
PRP6	YBR055C	TRP3	P00937	484 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	TUB2	P02557	457 aa	Known RBP	2.6	□□□□□ -1.99
PRP6	YBR055C	TUF1	P02992	437 aa	Known RBP	2.6	□□□□□ -1.99
PRP6	YBR055C	GCN4	P03069	281 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	SEC53	P07283	254 aa	Known RBP	2.6	□□□□□ -1.99
PRP6	YBR055C	SUI3	P09064	285 aa	Known RBP	2.6	□□□□□ -1.99
PRP6	YBR055C	CDC24	P11433	854 aa	Predicted RBP	2.6	□□□□□ -1.99
PRP6	YBR055C	BIK1	P11709	440 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	CKA1	P15790	372 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	PEX1	P24004	1043 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	FEN2	P25621	512 aa	Known RBP	2.6	□□□□□ -1.99
PRP6	YBR055C	MRP20	P32387	263 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	SAC6	P32599	642 aa	Known RBP	2.6	□□□□□ -1.99
PRP6	YBR055C	SRP72	P38688	640 aa	Known RBP	2.6	□□□□□ -1.99
PRP6	YBR055C	PSD1	P39006	500 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	ARF3	P40994	183 aa	RIP-Chip data	2.6	□□□□□ -1.99	not detected
PRP6	YBR055C	RMD8	P43620	662 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	VPS62	P53285	467 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	ORC3	P54790	616 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	YPL108W	Q02872	168 aa	Predicted RBP	2.6	□□□□□ -1.99
PRP6	YBR055C	ARP9	Q05123	467 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	STP3	Q05937	343 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	RXT3	Q07458	294 aa		2.6	□□□□□ -1.99
PRP6	YBR055C	CDC6	P09119	513 aa		2.59	□□□□□ -1.99
PRP6	YBR055C	CTF13	P35203	478 aa		2.59	□□□□□ -1.99
PRP6	YBR055C	NOP4	P37838	685 aa	Known RBP	2.59	□□□□□ -1.99
PRP6	YBR055C	KTR3	P38130	404 aa	Predicted RBP	2.59	□□□□□ -1.99
PRP6	YBR055C	FMP10	P40098	244 aa		2.59	□□□□□ -1.99
PRP6	YBR055C	LSB3	P43603	459 aa	Known RBP	2.59	□□□□□ -1.99
PRP6	YBR055C	ARC1	P46672	376 aa	Known RBP	2.59	□□□□□ -1.99
PRP6	YBR055C	SIP4	P46954	829 aa		2.59	□□□□□ -1.99
PRP6	YBR055C	IDS2	P46958	469 aa		2.59	□□□□□ -1.99
PRP6	YBR055C	DSD1	P53095	428 aa		2.59	□□□□□ -1.99
PRP6	YBR055C	FDC1	Q03034	503 aa		2.59	□□□□□ -1.99
PRP6	YBR055C	RAD30	Q04049	632 aa		2.59	□□□□□ -1.99
PRP6	YBR055C	RGC1	Q06108	1083 aa	Known RBP	2.59	□□□□□ -1.99
PRP6	YBR055C	YFT2	Q06676	274 aa		2.59	□□□□□ -1.99
PRP6	YBR055C	AIM6	Q07716	390 aa		2.59	□□□□□ -1.99
PRP6	YBR055C	SMC6	Q12749	1114 aa		2.59	□□□□□ -1.99
PRP6	YBR055C	THO2	P53552	1597 aa	Known RBP	2.59	□□□□□ -1.99
PRP6	YBR055C	RPL19A	P0CX82	189 aa	Known RBP	2.59	□□□□□ -2
PRP6	YBR055C	RPL19B	P0CX83	189 aa	Predicted RBP	2.59	□□□□□ -2
PRP6	YBR055C	RPC53	P25441	422 aa		2.59	□□□□□ -2
PRP6	YBR055C	KAR4	P25583	335 aa		2.59	□□□□□ -2
PRP6	YBR055C	YCR015C	P25616	317 aa		2.59	□□□□□ -2
PRP6	YBR055C	PEP3	P27801	918 aa		2.59	□□□□□ -2
PRP6	YBR055C	SWC3	P31376	625 aa		2.59	□□□□□ -2
PRP6	YBR055C	DBF4	P32325	704 aa		2.59	□□□□□ -2
PRP6	YBR055C	DCG1	P32460	244 aa		2.59	□□□□□ -2
PRP6	YBR055C	APE4	P38821	490 aa		2.59	□□□□□ -2
PRP6	YBR055C	PLB1	P39105	664 aa		2.59	□□□□□ -2
PRP6	YBR055C	YJL193W	P39542	402 aa		2.59	□□□□□ -2
PRP6	YBR055C	MEF2	P39677	819 aa		2.59	□□□□□ -2
PRP6	YBR055C	PIG2	P40187	538 aa		2.59	□□□□□ -2
PRP6	YBR055C	SKP2	P42843	763 aa		2.59	□□□□□ -2
PRP6	YBR055C	RFX1	P48743	811 aa		2.59	□□□□□ -2
PRP6	YBR055C	RCF1	Q03713	159 aa		2.59	□□□□□ -2
PRP6	YBR055C	YMR155W	Q03795	547 aa		2.59	□□□□□ -2
PRP6	YBR055C	ACK1	Q07622	623 aa	Predicted RBP	2.59	□□□□□ -2
PRP6	YBR055C	NOP12	Q08208	459 aa	Known RBP	2.59	□□□□□ -2
PRP6	YBR055C	CIR2	Q08822	631 aa		2.59	□□□□□ -2
PRP6	YBR055C	VPS33	P20795	691 aa		2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms